ViewGene

Locus Name:
GeneID:
Location:

GeneID:6561
TrivialName: PA14_11360
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_11360
PAO1 Ortholog Locus:
Sequence Length:1233
Protein Length:410
Start: 986770
Stop: 988002
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGACGGAAGTCACGGACCCGCGAGTCGGCGACCAGCGCCTGGCGGCCGCGGCTGAGGAACTGGTCGAGCAG
CGGCAGGTTGGCGCGGTCGTAGAGCACGTCGGCCACCAAGATCAGGTCGAAGCGATCGTCCTCGGCGAAGAA
GTCCGCCGAATAGCTCAGCTCCACTCCGTTCAGTTCGGCGTTCGCCCGGCTCGCTGCCAGCGCCAGGGGATC
CAGGTCGCAAGCCACCACCTCGGCGGCGCCGGCGCGGGCCGCGGCGATCGCCGCCACCCCGGAGCCGCTGCC
GAAGTCCAGCACGCGCTTGTCGCGGACCCACTGCGGGCGCTCCGCCAGCCAGCGCGCCAGGACCAGCCCGCT
GGCCCAGCAGAAGCACCAGTACGGCGGCTCTTCGAGGATGCGGCGGGTTTCCTCCGGGCTGAACTGGCGGTC
CATGTTCTGCGCGTCGATCAGCCACAGGCGCAGGTCGGTGCCGGGCAGCGCGGTGGCGCTGAGCCGGGCGTC
GCCGAGCAGCTCGCCCAGCGCCTGGGTCAGGGCTTGGGGTGCCGTCACGGCGCGCGTACCAGGCGCAGTTCG
CCGAGGGACTGGGTGGTCGGCTGGGCGATCCGCAACGGATGCAGGCGCCAGGCCAACTGGCCGGACTGGATC
ACCCGCGCGTGCAGTTCGACGCGCAGCGCGCCACCGGCCGGCGGGAAGGACTCGGGGTTGAACGGCAGGCGG
AAGGGCATGAGTTCGCCGGTGGCCAGCACCGTCTCGCTGGCCAGCAGCCGCTGTGGGCGGTCGCGCTCGTCG
ATCACCAGCAGTGCCATCTGCACCTCGCTGCCGCGTGGCAGGCTGCCCTGGATGCTGCTCAGCGTTCCGCTC
AGCTCGCGCAGGTGGGCCGGCAGCACCGGCTCGACCATGGTCACGCTGCGCGAAGCTTGCGGCGTTGGCGCA
GGCTTCGGCTTGTCGCTGGAACAAGCGGCGAGGAGAAGGACGGCCAGCAGGGCGATCGAGCGCAGGGTCATG
GGCTGCTCCATAGCGGTGGAATCCGGGCGGCGCTTGTATAGCGCAAAGTGTGATTCTTGTCGCGCTTCGCGT
AGGCCGCAACGTCCGATTCTTCCCGCCTCTCCCAGCGTGCCGGCGCCGGTCGATTCTGCGGGTGCTCGGTCG
GGCGCGGATGCGCTACCATGCGGCTTCCTTCAGCTACGCCTGTATCAGCACCATGCATTGTCCCTTCTGCGG
TGCCCATGA
Translation:
MTEVTDPRVGDQRLAAAAEELVEQRQVGAVVEHVGHQDQVEAIVLGEEVRRIAQLHSVQFGVRPARCQRQGI
QVASHHLGGAGAGRGDRRHPGAAAEVQHALVADPLRALRQPARQDQPAGPAEAPVRRLFEDAAGFLRAELAV
HVLRVDQPQAQVGAGQRGGAEPGVAEQLAQRLGQGLGCRHGARTRRSSPRDWVVGWAIRNGCRRQANWPDWI
TRACSSTRSAPPAGGKDSGLNGRRKGMSSPVASTVSLASSRCGRSRSSITSSAICTSLPRGRLPWMLLSVPL
SSRRWAGSTGSTMVTLREACGVGAGFGLSLEQAARRRTASRAIERRVMGCSIAVESGRRLYSAKCDSCRASR
RPQRPILPASPSVPAPVDSAGARSGADALPCGFLQLRLYQHHALSLLRCP*
AnnotationID:6562GeneID:6561
AnnotatorUID: diggins
Modification Date/Time: 2005-03-30 05:05:56
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12905
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30222
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49563How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3967167Stop: 3965935
Length: 1233
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGACGGAAGTCACGGACCCGCGAGTCGGCGACCAGCGCCTGGCGGCCGCGGCTGAGGAACTGGTCGAGCAG
CGGCAGGTTGGCGCGGTCGTAGAGCACGTCGGCCACCAAGATCAGGTCGAAGCGATCGTCCTCGGCGAAGAA
GTCCGCCGAATAGCTCAGCTCCACTCCGTTCAGTTCGGCGTTCGCCCGGCTCGCTGCCAGCGCCAGGGGATC
CAGGTCGCAAGCCACCACCTCGGCGGCGCCGGCGCGGGCCGCGGCGATCGCCGCCACCCCGGAGCCGCTGCC
GAAGTCCAGCACGCGCTTGTCGCGGACCCACTGCGGGCGCTCCGCCAGCCAGCGCGCCAGGACCAGCCCGCT
GGCCCAGCAGAAGCACCAGTACGGCGGCTCTTCGAGGATGCGGCGGGTTTCCTCCGGGCTGAACTGGCGGTC
CATGTTCTGCGCGTCGATCAGCCACAGGCGCAGGTCGGTGCCGGGCAGCGCGGTGGCGCTGAGCCGGGCGTC
GCCGAGCAGCTCGCCCAGCGCCTGGGTCAGGGCTTGGGGTGCCGTCACGGCGCGCGTACCAGGCGCAGTTCG
CCGAGGGACTGGGTGGTCGGCTGGGCGATCCGCAACGGATGCAGGCGCCAGGCCAACTGGCCGGACTGGATC
ACCCGCGCGTGCAGTTCGACGCGCAGCGCGCCACCGGCCGGCGGGAAGGACTCGGGGTTGAACGGCAGGCGG
AAGGGCATGAGTTCGCCGGTGGCCAGCACCGTCTCGCTGGCCAGCAGCCGCTGTGGGCGGTCGCGCTCGTCG
ATCACCAGCAGTGCCATCTGCACCTCGCTGCCGCGTGGCAGGCTGCCCTGGATGCTGCTCAGCGTTCCGCTC
AGCTCGCGCAGGTGGGCCGGCAGCACCGGCTCGACCATGGTCACGCTGCGCGAAGCTTGCGGCGTTGGCGCA
GGCTTCGGCTTGTCGCTGGAACAAGCGGCGAGGAGAAGGACGGCCAGCAGGGCGATCGAGCGCAGGGTCATG
GGCTGCTCCATAGCGGTGGAATCCGGGCGGCGCTTGTATAGCGCAAAGTGTGATTCTTGTCGCGCTTCGCGT
AGGCCGCAACGTCCGATTCTTCCCGCCTCTCCCAGCGTGCCGGCGCCGGTCGATTCTGCGGGTGCTCGGTCG
GGCGCGGATGCGCTACCATGCGGCTTCCTTCAGCTACGCCTGTATCAGCACCATGCATTGTCCCTTCTGCGG
TGCCCATGA