ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6560

TrivialName: PA14_11390

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_11390

PAO1 Ortholog Locus:

Sequence Length: 1362

Protein Length: 453

Start: 989724

Stop: 988363

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC33390.1| (U20246) vrlB [Dichelobacter nodosus] Identities = 60/211 (28%), Positives = 79/211 (37%), Gaps = 33/211 (15%)

Sequence:

GTGGCCGGTCCGGCAAGCGCTCGCGGGCTAGGCACCTTGCGCGCCATTACCGCCGGTGGGGACTTTCACCCC
GCCCTGAGAACGTTACGGCCACCAAGATGGCCGTGTGGCGTTTTACCACAGTTGCGCCGCTTGTGCATCGTC
CGCCGCGTCGCCGCGCAGCGAAGTTCAAGCGTCCCGCGGATGGGGCCGCGCGGTGACCAGCCAGTCGTCGCC
CACCGCGCGGATGTCGTCGATCCGCAACTGCGCCGCATCGGCCATCCGCGTCAGCGGCCAGTCGAGCAAAGG
ACGGGCGCTGGAGCCGAGGAACTTCGGCGCGACGAACAGCCGGTACTCATCCACCAGCCCCAGTCGAGCGAA
GGCGCCGGCCAGGCGGGGGCCGGCCTCCACCAGCACTTCGTTGGCGCCGCGCGCCGCCAGTTCCACGAGCAA
CTTGTGCAGGTCGACATGCCCCTCGGCGGAGGGCAGCGCCAGCAGTTCGTGACCGGCGTCCTGGAAGCGTTC
GCGCGCCGAGGCGGCGGCGCAGGTCGCCACCAGTGCCGGACCGGCCTGGTAGAACGCCGACTCCAGCGGCAC
CCGCAGGCGCCCGTCGACCAGCACCCGCAACGGCTGGCGAGCCGCGGCGAGCGCGGTAAGCTCGGCGTTCAG
GCCCAGTTCGTCGGGGCGTACGTTGAGCCGCGCATCGTCCGCCAGCAGCGTATCGGCGCCGGACAACACCAC
GCTGGAGCGAGCGCGCAAGCGCTGCACCGCCGAACGCGCAGAGGGCCCGGTGATCCACTGGCTTTCCCCGCT
GGCCATGGCGGTGCGCCCGTCCAGGCTCATCGCCAGCTTGACCCGGACGAACGGCAGGCCATGTTCCATGCG
CTTGATGAAACCGATGTTGAGTTCCCGCGCCTCGGCTTCGAGGACCCCGCTCTGCACCGCGATGCCGGCCTG
CATCAGACGCAGCAGGCCGCGACCGGCGACCTCGGGGTTGGGATCCTGCATCGCCGCGACCACCCGCGCCAC
CCCGGCGCCCACCAGCGCGTCGGCGCACGGCGGGGTGCGGCCGAAGTGGCTGCAGGGCTCGAGGGTCACGTA
GGCGGTGGCGCCGCGTGCATTCTCGCCGGCCTGGCGCAGGGCATGGACCTCGGCGTGCGGCTCGCCGGCGCG
GACGTGCCAGCCCTCGCCGACCACCTGGCCGTCCTTGACCAGCACGCAGCCGACGCGCGGATTCGGATGGGT
GGAGTACAGCCCCTGGCGCGCCAGTTCCAGGGCGCGGGCCATGTACAGCGGGTCGGCGGCGTTCATTCCTTG
GCCGGCTCGCGGGCGAGGCGTTCGATCTCCTCGCGGAATTCGTTGAGGTCCTGGAAGCGCCGGTAG

Translation:

MAGPASARGLGTLRAITAGGDFHPALRTLRPPRWPCGVLPQLRRLCIVRRVAAQRSSSVPRMGPRGDQPVVA
HRADVVDPQLRRIGHPRQRPVEQRTGAGAEELRRDEQPVLIHQPQSSEGAGQAGAGLHQHFVGAARRQFHEQ
LVQVDMPLGGGQRQQFVTGVLEAFARRGGGAGRHQCRTGLVERRLQRHPQAPVDQHPQRLASRGERGKLGVQ
AQFVGAYVEPRIVRQQRIGAGQHHAGASAQALHRRTRRGPGDPLAFPAGHGGAPVQAHRQLDPDERQAMFHA
LDETDVEFPRLGFEDPALHRDAGLHQTQQAATGDLGVGILHRRDHPRHPGAHQRVGARRGAAEVAAGLEGHV
GGGAACILAGLAQGMDLGVRLAGADVPALADHLAVLDQHAADARIRMGGVQPLARQFQGAGHVQRVGGVHSL
AGSRARRSISSRNSLRSWKRR*

AnnotationID:6561 GeneID:6560

AnnotatorUID: diggins

Modification Date/Time: 2005-03-29 19:07:08

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16324

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30220