ViewGene
Locus Name:
GeneID:
Location:

GeneID:6558
TrivialName: PA14_11500
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_11500
PAO1 Ortholog Locus:
Sequence Length:567
Protein Length:188
Start: 996281
Stop: 995715
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCGCGAGCATCGGCTGGCACATGGCGTAGTCGCGCTGGTCGGCGCCAAAACCCAGTTGCAGGTTCGCCTC
GACGGTGTCGGCACCGCCATCCTGCAATTCATAGGCACGGATCTTGTTCAGCAGGCCGATGCCGCGACCTTC
CTGGCGCAGGTAGAGGAGCACGCCGCGGCCCTCCTCGGCGATGGCGGCAAGCGCGCCTTCCAACTGGAAACC
GCAATCGCAGCGCAGGCTGAACAGCGCGTCGCCGGTCAGGCATTCGGAATGCAGGCGACCAAGCACCGGCGC
GCCATCGGCGATGTCGCCCATGCTCAGGGCTACATGTTCCTTGCCGCTCTCCTCGTCGAGGAAACCATGCAT
GGTGAATTCGCCGAAGGGAGTCGGCAGTTTGGAGGCGGCGACGAACACGACGGACACCGGGGAACTCCTAGG
GAAACGGAAGTCCGCCATTGTACCAGCAGCGTCCGGCGCCCGGTCAGCTCGAAATGCCGCAAATACCTATCG
AGATGGACGATGAATAGAACCCCGGGTTATGAGCGAGCGACATTCAATGCTTGGCCTCGATAA
Translation:
MREHRLAHGVVALVGAKTQLQVRLDGVGTAILQFIGTDLVQQADAATFLAQVEEHAAALLGDGGKRAFQLET
AIAAQAEQRVAGQAFGMQATKHRRAIGDVAHAQGYMFLAALLVEETMHGEFAEGSRQFGGGDEHDGHRGTPR
ETEVRHCTSSVRRPVSSKCRKYLSRWTMNRTPGYERATFNAWPR*
AnnotationID:6559GeneID:6558
AnnotatorUID: urbach
Modification Date/Time: 2004-10-06 15:03:40
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:16320




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30216




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49560How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3957656Stop: 3958222

          
Length: 567


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCGCGAGCATCGGCTGGCACATGGCGTAGTCGCGCTGGTCGGCGCCAAAACCCAGTTGCAGGTTCGCCTC 
GACGGTGTCGGCACCGCCATCCTGCAATTCATAGGCACGGATCTTGTTCAGCAGGCCGATGCCGCGACCTTC 
CTGGCGCAGGTAGAGGAGCACGCCGCGGCCCTCCTCGGCGATGGCGGCAAGCGCGCCTTCCAACTGGAAACC 
GCAATCGCAGCGCAGGCTGAACAGCGCGTCGCCGGTCAGGCATTCGGAATGCAGGCGACCAAGCACCGGCGC 
GCCATCGGCGATGTCGCCCATGCTCAGGGCTACATGTTCCTTGCCGCTCTCCTCGTCGAGGAAACCATGCAT 
GGTGAATTCGCCGAAGGGAGTCGGCAGTTTGGAGGCGGCGACGAACACGACGGACACCGGGGAACTCCTAGG 
GAAACGGAAGTCCGCCATTGTACCAGCAGCGTCCGGCGCCCGGTCAGCTCGAAATGCCGCAAATACCTATCG 
AGATGGACGATGAATAGAACCCCGGGTTATGAGCGAGCGACATTCAATGCTTGGCCTCGATAA