ViewGene
Locus Name:
GeneID:
Location:

GeneID:6555
TrivialName: PA14_11710
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_11710
PAO1 Ortholog Locus:
Sequence Length:918
Protein Length:305
Start: 1013848
Stop: 1014765
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCAGTGGGTCCTGGCGGTAGAACAACTGGAGCTGCCGGTATACCGCCGGATAGGCCTCGTGGAGGAGATC
CGGAGCGGTGAAGAAATACTCGCTGGTAACGGCGAAGAACTCCGCCGGATCTTCCGCCGCATAGGGATCGAT
GGCGGTCTGCGCGTCGGGATCGCGGTCGAGCAGGGCGTTCATCTCGTCGTAGGCGGCCTGCATGGCGCTCGC
CCAGTCGCCGATGCGCATGCCGGCGTGCAGCGGCGGCAGGCCGTTGGCGTCGCCGTTGAGCATGTCCAGCTT
GTGCGCCAGTTCGTGGATCACCAGGTTGTAGGCATCCCAGCCACCCCCGCCGACGACGCCGGGCCAGGCCAG
GACCACCGGCCCTTGCAGGGAGGTCTCGCCGCTGCGTTCGTCGTCGAACTCATGGACTACGCCGCTGGCGTC
GCGGTGTTTCTGCGGGCTGACGAAATCGTCGGGATACAGCACCAGCTCGTGGAAGCCCTGGTACCAGTTCAG
CTCCGGCAGGTGCAACAGCGGCAGTTGCGCCTGCGCCGCCAGCAGCAGGCGGCCGAAGTCGTCGAGATCGAC
GCCGGCGAGTGCGGTCAGGTGCTTGTCGGCGAGAAACAGCACGGCCCGCTCGCGCAGGCGGCGGTCCTCGTC
GGCGTCCAGGCCGTCGAGGATCGGCAGGTGCCGGCGTACCCGCTGCCAGAGCTCTTCGGCCACCGGGTGGCG
CGCCAGCAGGCGCCGGCGCCGCCAGGCGCGGAACGACCACATGCTCAGTCGCTCTGGGCCTTGGCCTGTTTG
GCGGCGCTCGCCTGCAGGCGATGGCGAATGAAGCCGAGGATCATCGGCAGCAGCGACAGCAGGATGATGCCG
ATCACCAGCAGCGACAGGTTCTTCTTGATGAACGGCACGTTGCCGAAGAAGTAG
Translation:
MQWVLAVEQLELPVYRRIGLVEEIRSGEEILAGNGEELRRIFRRIGIDGGLRVGIAVEQGVHLVVGGLHGAR
PVADAHAGVQRRQAVGVAVEHVQLVRQFVDHQVVGIPATPADDAGPGQDHRPLQGGLAAAFVVELMDYAAGV
AVFLRADEIVGIQHQLVEALVPVQLRQVQQRQLRLRRQQQAAEVVEIDAGECGQVLVGEKQHGPLAQAAVLV
GVQAVEDRQVPAYPLPELFGHRVARQQAPAPPGAERPHAQSLWALACLAALACRRWRMKPRIIGSSDSRMMP
ITSSDRFFLMNGTLPKK*
AnnotationID:6556GeneID:6555
AnnotatorUID: urbach
Modification Date/Time: 2004-09-29 16:04:05
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:16315




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30210




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49557How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3940089Stop: 3939172

          
Length: 918


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCAGTGGGTCCTGGCGGTAGAACAACTGGAGCTGCCGGTATACCGCCGGATAGGCCTCGTGGAGGAGATC 
CGGAGCGGTGAAGAAATACTCGCTGGTAACGGCGAAGAACTCCGCCGGATCTTCCGCCGCATAGGGATCGAT 
GGCGGTCTGCGCGTCGGGATCGCGGTCGAGCAGGGCGTTCATCTCGTCGTAGGCGGCCTGCATGGCGCTCGC 
CCAGTCGCCGATGCGCATGCCGGCGTGCAGCGGCGGCAGGCCGTTGGCGTCGCCGTTGAGCATGTCCAGCTT 
GTGCGCCAGTTCGTGGATCACCAGGTTGTAGGCATCCCAGCCACCCCCGCCGACGACGCCGGGCCAGGCCAG 
GACCACCGGCCCTTGCAGGGAGGTCTCGCCGCTGCGTTCGTCGTCGAACTCATGGACTACGCCGCTGGCGTC 
GCGGTGTTTCTGCGGGCTGACGAAATCGTCGGGATACAGCACCAGCTCGTGGAAGCCCTGGTACCAGTTCAG 
CTCCGGCAGGTGCAACAGCGGCAGTTGCGCCTGCGCCGCCAGCAGCAGGCGGCCGAAGTCGTCGAGATCGAC 
GCCGGCGAGTGCGGTCAGGTGCTTGTCGGCGAGAAACAGCACGGCCCGCTCGCGCAGGCGGCGGTCCTCGTC 
GGCGTCCAGGCCGTCGAGGATCGGCAGGTGCCGGCGTACCCGCTGCCAGAGCTCTTCGGCCACCGGGTGGCG 
CGCCAGCAGGCGCCGGCGCCGCCAGGCGCGGAACGACCACATGCTCAGTCGCTCTGGGCCTTGGCCTGTTTG 
GCGGCGCTCGCCTGCAGGCGATGGCGAATGAAGCCGAGGATCATCGGCAGCAGCGACAGCAGGATGATGCCG 
ATCACCAGCAGCGACAGGTTCTTCTTGATGAACGGCACGTTGCCGAAGAAGTAG