ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6539

TrivialName: PA14_12380

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_12380

PAO1 Ortholog Locus:

Sequence Length: 1374

Protein Length: 457

Start: 1066227

Stop: 1067600

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAA81143.1| (AP000063) 129aa long hypothetical protein [Aeropyrum pernix] Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 2/115 (1%)

Sequence:

TTGTCGGCGCGTTTATGCATTTCGGCTAGGAAGGCGTTCCGGCGGGGAGGAGGGCGGCGCCCGGGAAGGGCG
CCGCGAAGAGGATCATTTCAGCGCGGCGAAGGCTTTTTCGGCGGCGTTCAGCGTGATTTCCAGCTCCTTGTC
GCCATGGGCGATGGAGGTGAAGCCGGCCTCGAAGGCGCTAGGCGCAAGGTACACGCCACCGTCAAGCATCAG
GTGGAAGAAGCGCTTGAAGCGTTCGACGTCGCTGGCCATCACGTCCTCGAAGGTGACGATGGCGTCGGCGCC
GCTGAAGTACAGGCCGAACATGCCGCCCGCCTGGGTGGTGACGAAGGGGATGCCGGCGGCATCCGCGCGCTG
TTGCAGGCCGTCGAGCATGCGCGTGGTGTAGGCGGTCAGTTCGTTGTGGAAACCGGGGCGGCTGATCAGGCG
CAGGGTGGTCAGGCCGGCGGCCATTGCCAGCGGGTTGCCCGAGAGCGTGCCGGCCTGGTAGACCGGGCCCAG
CGGGGAAATCTGCTGCATGATCTCGCGCTTGCCGCCGAAGGCGCCCACCGGCATGCCGCCGCCGATGATCTT
GCCGAAGGTCGACAGGTCCGGGGTGACCCCGTAGTAGGCCTGGGCGCCGCCGAGGGCGACACGGAAGCCGGT
CATCACTTCGTCGAAGATCAGCACCACGCCGTGTTCGTCGCAGGCTTCACGCAGGCCTTCGAGGAAGCCCGG
CGCCGGCGGCACACAGTTCATGTTGCCGGCAACCGGCTCGACGATGATGCAGGCGACCTCCTTGCCGACTTC
GCCCAGTGTCTTGCGCACCGCCTCGATGTCGTTGAACGGCAGGGTCAGGGTGTGCTTGGCGAAGGCTGCCGG
AACGCCCGGGGAGTTCGGCACGCCGAAGGTCAACGCGCCGGAGCCGGCCTTCACCAGCAGGCTGTCGGAGTG
GCCGTGGTAGCAGCCTTCGAACTTGATGATGCTGTCGCGCCCGGTGTAGCCGCGGGCCAGGCGGATGGCGCT
CATGGTCGCCTCGGTGCCGGAGCTGACCATGCGCACCATCTCCATCGACGGCACCATGGAGCAGACCAGGTC
GGCCATTTCCACTTCCAGCGCGGTCGGCGCGCCATAGGACAGGCCGTGGTCGAGCTGCCGGCGCACCGCGTC
GAGCACGTCCGGATGGCTGTGGCCGAGGATCATCGGGCCCCAGGAGCCGACATAGTCCACGTAGCGCTTGTC
GTCCTCGTCCAGTACATAGGCGCCTTCGGCGTGCTTGAAGAACAGCGGGGTGCCGCCGACGCTCTTGAAGGC
GCGCACCGGGGAGTTGACCCCGCCGGGAATGTGTTTCTGGGCGTTGTTGAACAGCGTTTCGGAACGGGACAT
GGCTAG

Translation:

MSARLCISARKAFRRGGGRRPGRAPRRGSFQRGEGFFGGVQRDFQLLVAMGDGGEAGLEGARRKVHATVKHQ
VEEALEAFDVAGHHVLEGDDGVGAAEVQAEHAARLGGDEGDAGGIRALLQAVEHARGVGGQFVVETGAADQA
QGGQAGGHCQRVARERAGLVDRAQRGNLLHDLALAAEGAHRHAAADDLAEGRQVRGDPVVGLGAAEGDTEAG
HHFVEDQHHAVFVAGFTQAFEEARRRRHTVHVAGNRLDDDAGDLLADFAQCLAHRLDVVERQGQGVLGEGCR
NARGVRHAEGQRAGAGLHQQAVGVAVVAAFELDDAVAPGVAAGQADGAHGRLGAGADHAHHLHRRHHGADQV
GHFHFQRGRRAIGQAVVELPAHRVEHVRMAVAEDHRAPGADIVHVALVVLVQYIGAFGVLEEQRGAADALEG
AHRGVDPAGNVFLGVVEQRFGTGHG*

AnnotationID:6540 GeneID:6539

AnnotatorUID: diggins

Modification Date/Time: 2006-02-05 08:08:18

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16300

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30178