ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6534

TrivialName: PA14_12500

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_12500

PAO1 Ortholog Locus:

Sequence Length: 1752

Protein Length: 583

Start: 1077906

Stop: 1076155

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE07113.1| (BX569690) possible N-terminal part of IF-2 [Synechococcus sp. WH 8102] Identities = 96/321 (29%), Positives = 125/321 (38%), Gaps = 38/321 (11%)

Sequence:

TTGTCCGAGAGCCTGACCGCAAGAGCATCCCCTCATGCCCTCCCTGCGTCCCACCTGGCTGATCAGCCTGCT
GACCCTGGCCGGCTGCGCTGGCAGCGCCTATCAGGGTCCGCCTTCGGACCATTTCGACGGCGAACGTTTCCG
CAATATCCAGCCGACCGCGCACAAGAGCCTGCGCGACCTGCTCAAGTGGCAGTGGAACCGCCCGCCGCAACG
CCCGTGGGTCGCCCTGCCGCCGACGGCAACGCCGCCAAGGGTGAACGAGCGCGCCCGCGGCGAAGAACTGCG
GGTCACCTACATCAACCACGCCACCCTGCTGATCCAGCACCGCGGCCTGAACATCCTCACCGACCCGGTCTG
GTCGCAACGGGTCAGCCCGCTCGCCTTCATCGGCCCGAAGCGCCACCATCCGCCCGGGTTGACGCTCGACCA
GTTGCCGCCGATCGACCTGGTGCTGGTGAGCCACAACCACTACGACCACCTCGACCTGGAAACCCTGCGCCA
GCTCCACCGGCGCTGGCCGACGGCCAAGGTAGTCAGCGGCCTGGGCAACGCCGGGCTGATCCGCCAGACAGG
TTTCGCCGACGTCGTGGAGATCGACTGGTGGCAGGCCGTGCCGCTGGGCGCTGGCCTGACGCTGCATGGCGT
ACCGGTGCAGCACTGGTCGTCGCGCACCCGCAGCGACACCAACCGCACGCTCTGGCTCGGCTTCGTCATCGA
CTCGCCGGACGGCCCGCTGCTGTTTCCCGGCGATACCGGGCTCGGCCCGGAGTTCGGGCTGATCCACCAGCG
CTTCGGGGCGATGCGTTTCGCCGCCCTGCCGATCGGCGCCTACGAGCCGCGCTGGTTCATGCGCGACCACCA
CATGAATCCCGACGACGCGGTGCAGGCCCATCGCACGCTGCAGGCGCAGACCAGCATGGCCATCCACTTCGG
TACCTTCAATCTCACCGACGAACAGCAGGACGACCCGCCCAAGGCACTCCAGGCGGCGCTGCGCAGCCAAGG
CGTGGACCCGGCGACCTTCGGCACGCCGAAACCCGGCGAGCAGTGGCGCGTCGCACCGCGCAACGTCGCTCA
GGAGGCCGAGGCCACCAGGCGGGAGCAGCAGTTGCGGTAGCGCTTGCCGCTGCCGCACGGACAAGCCTGGTC
GCCACGGCCGCCCAGGGCCAGCCAGCTTTCCAGGCGCGCGGCCATCCCGGCCAGGCGCTCGCGGGCCTCGTC
GTCCAGGCCGGCGCGGGCCAGTTGGCGCCGCAGGCCGAGGTAGTCTTCCAGCAGGACATCGCGGCTGAGCGC
CTGGTACTGGTCGGCCAGCGGCACGCCTTCGTAGCGCCGCTGCGGGTCGGCCAGGAAAGCGATGGCGCCCGC
CTGCGGCAGGACATTCCAGAGGTTGCCGCGCGGATCGCGCCAGCAAGCGCTGAAACGCGCGCGCAGGGCCAG
GCCGCGCCATTCTTCCAGGATCCAGCCGTCGACCCGCTCGCCGCCGAGGGCGTCGACCGCCCGACCGACCGA
GAACCACGGTTCGCCGGCCAGGCTTTCCGGCATCGGCAACGGCGCTGCCACTTCTGGCGCGGCATCGGGCAC
CAGGCGGCGGGCGAAGCGACGGAGCGGGTTGCTGAGATGAGTGGGGGCGCTGAACGGCATGGGGCTCACATC
GATGGCAGGCGTGGTCGTTCCGACCGGCAGAAGGTGCCGCGGTTCCACGCAGGGCGAAGGGCCGTCATTTTA
GGGCCTCGGCGCCGCGAGGCGTAG

Translation:

MSESLTARASPHALPASHLADQPADPGRLRWQRLSGSAFGPFRRRTFPQYPADRAQEPARPAQVAVEPPAAT
PVGRPAADGNAAKGERARPRRRTAGHLHQPRHPADPAPRPEHPHRPGLVATGQPARLHRPEAPPSARVDARP
VAADRPGAGEPQPLRPPRPGNPAPAPPALADGQGSQRPGQRRADPPDRFRRRRGDRLVAGRAAGRWPDAAWR
TGAALVVAHPQRHQPHALARLRHRLAGRPAAVSRRYRARPGVRADPPALRGDAFRRPADRRLRAALVHARPP
HESRRRGAGPSHAAGADQHGHPLRYLQSHRRTAGRPAQGTPGGAAQPRRGPGDLRHAETRRAVARRTAQRRS
GGRGHQAGAAVAVALAAAARTSLVATAAQGQPAFQARGHPGQALAGLVVQAGAGQLAPQAEVVFQQDIAAER
LVLVGQRHAFVAPLRVGQESDGARLRQDIPEVAARIAPASAETRAQGQAAPFFQDPAVDPLAAEGVDRPTDR
EPRFAGQAFRHRQRRCHFWRGIGHQAAGEATERVAEMSGGAERHGAHIDGRRGRSDRQKVPRFHAGRRAVIL
GPRRREA*

AnnotationID:6535 GeneID:6534

AnnotatorUID: danlee

Modification Date/Time: 2006-03-20 14:02:43

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

Overlaps GID1654 (PA14_12530).

ReferenceID:16292

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30168