ViewGene
Locus Name:
GeneID:
Location:

GeneID:6533
TrivialName: PA14_12510
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_12510
PAO1 Ortholog Locus:
Sequence Length:627
Protein Length:208
Start: 1076203
Stop: 1076829
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGGAACCGCGGCACCTTCTGCCGGTCGGAACGACCACGCCTGCCATCGATGTGAGCCCCATGCCGTTCAGC
GCCCCCACTCATCTCAGCAACCCGCTCCGTCGCTTCGCCCGCCGCCTGGTGCCCGATGCCGCGCCAGAAGTG
GCAGCGCCGTTGCCGATGCCGGAAAGCCTGGCCGGCGAACCGTGGTTCTCGGTCGGTCGGGCGGTCGACGCC
CTCGGCGGCGAGCGGGTCGACGGCTGGATCCTGGAAGAATGGCGCGGCCTGGCCCTGCGCGCGCGTTTCAGC
GCTTGCTGGCGCGATCCGCGCGGCAACCTCTGGAATGTCCTGCCGCAGGCGGGCGCCATCGCTTTCCTGGCC
GACCCGCAGCGGCGCTACGAAGGCGTGCCGCTGGCCGACCAGTACCAGGCGCTCAGCCGCGATGTCCTGCTG
GAAGACTACCTCGGCCTGCGGCGCCAACTGGCCCGCGCCGGCCTGGACGACGAGGCCCGCGAGCGCCTGGCC
GGGATGGCCGCGCGCCTGGAAAGCTGGCTGGCCCTGGGCGGCCGTGGCGACCAGGCTTGTCCGTGCGGCAGC
GGCAAGCGCTACCGCAACTGCTGCTCCCGCCTGGTGGCCTCGGCCTCCTGA
Translation:
MEPRHLLPVGTTTPAIDVSPMPFSAPTHLSNPLRRFARRLVPDAAPEVAAPLPMPESLAGEPWFSVGRAVDA
LGGERVDGWILEEWRGLALRARFSACWRDPRGNLWNVLPQAGAIAFLADPQRRYEGVPLADQYQALSRDVLL
EDYLGLRRQLARAGLDDEARERLAGMAARLESWLALGGRGDQACPCGSGKRYRNCCSRLVASAS*
AnnotationID:6534GeneID:6533
AnnotatorUID: danlee
Modification Date/Time: 2006-03-20 14:02:17
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:
Opposite GID1654 (PA14_12530).


















    ReferenceID:16290




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30166




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49535How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3877735Stop: 3877109

          
Length: 627


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGGAACCGCGGCACCTTCTGCCGGTCGGAACGACCACGCCTGCCATCGATGTGAGCCCCATGCCGTTCAGC 
GCCCCCACTCATCTCAGCAACCCGCTCCGTCGCTTCGCCCGCCGCCTGGTGCCCGATGCCGCGCCAGAAGTG 
GCAGCGCCGTTGCCGATGCCGGAAAGCCTGGCCGGCGAACCGTGGTTCTCGGTCGGTCGGGCGGTCGACGCC 
CTCGGCGGCGAGCGGGTCGACGGCTGGATCCTGGAAGAATGGCGCGGCCTGGCCCTGCGCGCGCGTTTCAGC 
GCTTGCTGGCGCGATCCGCGCGGCAACCTCTGGAATGTCCTGCCGCAGGCGGGCGCCATCGCTTTCCTGGCC 
GACCCGCAGCGGCGCTACGAAGGCGTGCCGCTGGCCGACCAGTACCAGGCGCTCAGCCGCGATGTCCTGCTG 
GAAGACTACCTCGGCCTGCGGCGCCAACTGGCCCGCGCCGGCCTGGACGACGAGGCCCGCGAGCGCCTGGCC 
GGGATGGCCGCGCGCCTGGAAAGCTGGCTGGCCCTGGGCGGCCGTGGCGACCAGGCTTGTCCGTGCGGCAGC 
GGCAAGCGCTACCGCAACTGCTGCTCCCGCCTGGTGGCCTCGGCCTCCTGA