ViewGene

Locus Name:
GeneID:
Location:

GeneID:6531
TrivialName: PA14_12580
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_12580
PAO1 Ortholog Locus:
Sequence Length:1482
Protein Length:493
Start: 1080045
Stop: 1081526
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG26883.1|AF293354_6 (AF293354) PKSA putative O-methyltransferase; PKSA-ORF6 [Streptomyces collinus]
Identities = 78/235 (33%), Positives = 87/235 (37%), Gaps = 46/235 (19%)
Sequence:
GTGATTTATTGCGCAATCAAGGTTCTGGTGAGCAATATTAGCAATCATTGGTCGCGCCTGGCGACGTATTCT
TTTACCCAGATTCACGGCCCGGACATCTCGTCCATCACGGCTCGCCCAATCAGGCCAGCCGTGGCCGCCGAC
CCTACAGGGTTGCGCCGGCCTCCGGGTTGCACACCGCCCAGAAGGTGGAGTGAGGTGAGCCGTCGCCAACAG
CGCCGAGCCAGGACAGTTACCCCAGAAGGGAGGTCGACGGGCCTCCCTTTTTCTTTGCCCGCGATCCGGCCC
GTGCCGCGCTTTTACCCATTCTTTACCCGGCGTTTACCCACCCTTGGCGGAAAACGGCGGAAAGTCGTTCCC
GGGATCATTCGAACGTGGCCGGGCGACCAGGCCCGGGGCGAGGCAGACGATGAACGGTGGATGGTGGCGAAT
GCTCGGGGTGGGCGCTCTCTCGCTGAGCCTGTGCGTCCAGGCGCAGGCCGACGACGGCCGAGGGGGACGCGG
CGGACCCGGCGGCGAGCGCGGTGTTGCCCACGGACAACCGGGACCTGGCCGCGGCGAAGCGCATGGCGGCAG
TTGGGGACCGCATCCCGACTGGCGTCCGGGCCGGATGGTGGATGCCTTGCCGCGCGGACACCTGCGGGTGCC
CTATCGCGGCGGCGAGTATTTCTTCCACGACGGCTACTGGTACCGACCCGACGGCCCGCGCTATGTGCTGGT
CGTGCCGCCCCGCGGGGTGCGCGTCCGCAGCCTGCCGCCCTATGCGGAGCAGGTCTGGCTGGGCAGCGTGCT
GTACTTCCTTGCCGCCGGCACTTACTACCTGTGGCATGCCGACACCCGCGAGTACGAAGTGGTCAGCCCGCC
GCCGCGGGCAGCGGGACCCGTTTATCCGGTCAGCGGGCCGGCCGCCAGCTACGACGTGGTGGCCTACCCCGC
GCGCGGCCAGGGGCCCGACCAGCAGAGCCGCGACCGCTACGAGTGCCACCGCTGGGCGGTGGTCGAGAGCGG
CTTCGACCCGGCGGGGGCGACCTACGCGCCGGCCGCCGAGGTCGCCAACGGCTACCGCCGGGCCATGGCCGC
CTGCCTGAGCGGGCGCGGCTACAGCGTCAACTGACGGTTTCCTTGCCGACCACTTCCTGCGGGTCGGCATGG
ATCAGCACCTCGGCCTTCGGGTATTCGCGCTTGATCGCCAGCACTGCGCGGTCGGTCAGGGCGTGGGCCACC
GACAGGCTCAGCTCGCCGGGCAGCTCGAGGTGCAACTGGACGAACCAGTGGTTGCCGGAAATCCGCGTGCGC
ACGTCGTGCGCGCCGAGCACTCCCGGCACGCTGCAGGCGAGTTCGCGCATGCGCTCGCTGATGTCGGTAGGC
AGTTCCCGGTCCATCAGGATCGACACCGACTCGCGAGCGATCTGCAGGGCGCTCCAGAGGATGTACAGGGCG
ATGCCCAGGCCGAACAGGCCGTCGCTCTGTGGCCAGCCGTAG
Translation:
MIYCAIKVLVSNISNHWSRLATYSFTQIHGPDISSITARPIRPAVAADPTGLRRPPGCTPPRRWSEVSRRQQ
RRARTVTPEGRSTGLPFSLPAIRPVPRFYPFFTRRLPTLGGKRRKVVPGIIRTWPGDQARGEADDERWMVAN
ARGGRSLAEPVRPGAGRRRPRGTRRTRRRARCCPRTTGTWPRRSAWRQLGTASRLASGPDGGCLAARTPAGA
LSRRRVFLPRRLLVPTRRPALCAGRAAPRGARPQPAALCGAGLAGQRAVLPCRRHLLPVACRHPRVRSGQPA
AAGSGTRLSGQRAGRQLRRGGLPRARPGARPAEPRPLRVPPLGGGRERLRPGGGDLRAGRRGRQRLPPGHGR
LPERARLQRQLTVSLPTTSCGSAWISTSAFGYSRLIASTARSVRAWATDRLSSPGSSRCNWTNQWLPEIRVR
TSCAPSTPGTLQASSRMRSLMSVGSSRSIRIDTDSRAICRALQRMYRAMPRPNRPSLCGQP*
AnnotationID:6532GeneID:6531
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 19:07:23
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:16287
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30162
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49533How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3873893Stop: 3872412
Length: 1482
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGATTTATTGCGCAATCAAGGTTCTGGTGAGCAATATTAGCAATCATTGGTCGCGCCTGGCGACGTATTCT
TTTACCCAGATTCACGGCCCGGACATCTCGTCCATCACGGCTCGCCCAATCAGGCCAGCCGTGGCCGCCGAC
CCTACAGGGTTGCGCCGGCCTCCGGGTTGCACACCGCCCAGAAGGTGGAGTGAGGTGAGCCGTCGCCAACAG
CGCCGAGCCAGGACAGTTACCCCAGAAGGGAGGTCGACGGGCCTCCCTTTTTCTTTGCCCGCGATCCGGCCC
GTGCCGCGCTTTTACCCATTCTTTACCCGGCGTTTACCCACCCTTGGCGGAAAACGGCGGAAAGTCGTTCCC
GGGATCATTCGAACGTGGCCGGGCGACCAGGCCCGGGGCGAGGCAGACGATGAACGGTGGATGGTGGCGAAT
GCTCGGGGTGGGCGCTCTCTCGCTGAGCCTGTGCGTCCAGGCGCAGGCCGACGACGGCCGAGGGGGACGCGG
CGGACCCGGCGGCGAGCGCGGTGTTGCCCACGGACAACCGGGACCTGGCCGCGGCGAAGCGCATGGCGGCAG
TTGGGGACCGCATCCCGACTGGCGTCCGGGCCGGATGGTGGATGCCTTGCCGCGCGGACACCTGCGGGTGCC
CTATCGCGGCGGCGAGTATTTCTTCCACGACGGCTACTGGTACCGACCCGACGGCCCGCGCTATGTGCTGGT
CGTGCCGCCCCGCGGGGTGCGCGTCCGCAGCCTGCCGCCCTATGCGGAGCAGGTCTGGCTGGGCAGCGTGCT
GTACTTCCTTGCCGCCGGCACTTACTACCTGTGGCATGCCGACACCCGCGAGTACGAAGTGGTCAGCCCGCC
GCCGCGGGCAGCGGGACCCGTTTATCCGGTCAGCGGGCCGGCCGCCAGCTACGACGTGGTGGCCTACCCCGC
GCGCGGCCAGGGGCCCGACCAGCAGAGCCGCGACCGCTACGAGTGCCACCGCTGGGCGGTGGTCGAGAGCGG
CTTCGACCCGGCGGGGGCGACCTACGCGCCGGCCGCCGAGGTCGCCAACGGCTACCGCCGGGCCATGGCCGC
CTGCCTGAGCGGGCGCGGCTACAGCGTCAACTGACGGTTTCCTTGCCGACCACTTCCTGCGGGTCGGCATGG
ATCAGCACCTCGGCCTTCGGGTATTCGCGCTTGATCGCCAGCACTGCGCGGTCGGTCAGGGCGTGGGCCACC
GACAGGCTCAGCTCGCCGGGCAGCTCGAGGTGCAACTGGACGAACCAGTGGTTGCCGGAAATCCGCGTGCGC
ACGTCGTGCGCGCCGAGCACTCCCGGCACGCTGCAGGCGAGTTCGCGCATGCGCTCGCTGATGTCGGTAGGC
AGTTCCCGGTCCATCAGGATCGACACCGACTCGCGAGCGATCTGCAGGGCGCTCCAGAGGATGTACAGGGCG
ATGCCCAGGCCGAACAGGCCGTCGCTCTGTGGCCAGCCGTAG