ViewGene

Locus Name:
GeneID:
Location:

GeneID:6528
TrivialName: PA14_12720
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_12720
PAO1 Ortholog Locus:
Sequence Length:1335
Protein Length:444
Start: 1089816
Stop: 1091150
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCTTGCCGAAATACTCCACTTCTTCGTGGAAGTGCAGGAAGGCCGACAGCACCAGGTCGACCCCGGCCGC
CTTCAGCGCGACGATGCGTTCGGCGATCTGCCGTGGCGTGCCGATCAGGTTGGTCTTGAAGCCGTCGTTGTA
TTGCACCAGGTCTTCGAAGGTGGATTTGGCCCAGTTGCCATCGCCCTCCGGCGAGGCCTTGCCGGCCTGTTT
CACCGCGTCGCCGAAGGCGTTCACCGCCTCGTAGTCGGCCTTGGCGATGATCTCGTCGAGCACCGCCCGCGC
TTCCTCCTCGGTGTCGCGGGCAATGATGAAGGCGTTCACTCCGACCTTGACCGAATGGCCGTTGGCCGCCGC
CTTGGCGCGGATGTCCTCGACCTGGGCGCGGATGCCGTCGATGCTGTTGCCGTTGGTGAAGTACCAGTCGGA
CACGCGCGAGGCCATGTCCCGCGCCGCCCGCGAGCTGCCGCCCTGGAAGATTTCCGGGTGCGGCTGCTGGAT
CGGCTTGGGTTTCAGGGTGTAGTCGTGGAAACGATAGAAATCGCCCTTGAAGGTGAAGTTTTCCTCGGTCCA
GATGCCTTTCAGCACGCGGATGAACTCTTCGGAGCGCCGATAGCGTTCGTCGTGCTCCAGCCAGGGTTCGCC
GATGCCGGTGAACTCTCCCTTGAACCAGCCGCTGACGATGTTCACCGCGACCCGGCCATTGGTCAGTTGGTC
GATCGTCGCCAGTTGCTTGGCCACGACCGCAGGATGCCAGGGGCCAGGCAGGATCGCCGCGATCACCTTGAG
CTTCTCGGTGGCCGCCAGCAGGGCGTGGCTGATGGCCACCGACTCGTGCTGGTACTCGGCGCCGTAGCCGGC
GGTGAAGCGGATCTGCGAGAGGGCGTAGTCGAAGCCGTTGCGTTCCGCCAACTGGGCCAGCTTGCGGTTGTA
GTCGATGTCCCAGCTGGTGCGCTGCTCGATCTTGCTCACCACCAGGCCGCCGCTGACGTTGGGGACCCAGTA
GGCGAAGTGGATCGGCTGTTGCTCTTGGCTCATCGGGGGTATCTCCGGGTAGGGGCGTGGTCCGGTGTCTAT
GAAGGAACCGTGCCATCCCGGATTCATGTTTTCGAATCAATGGCTTATGGGGGATATGGCGGAGGCGGCCTG
TCTTCTGCCGGACAGCCCTGTTGTCCCGCTGTTGCCCGGCAGACAGTCAGGCCGGCAAGCGCTGCAACAGTT
CGGCGGCGCGCAGTACCACGGCGTACTCGCCGTGCAGGTTGGCCAACGCCATCGCATGTACCTCGTCGGCGC
TGCGCGGGGTGCCATGGAAATCGGGCTTGGCGAAGGTGA
Translation:
MLAEILHFFVEVQEGRQHQVDPGRLQRDDAFGDLPWRADQVGLEAVVVLHQVFEGGFGPVAIALRRGLAGLF
HRVAEGVHRLVVGLGDDLVEHRPRFLLGVAGNDEGVHSDLDRMAVGRRLGADVLDLGADAVDAVAVGEVPVG
HARGHVPRRPRAAALEDFRVRLLDRLGFQGVVVETIEIALEGEVFLGPDAFQHADELFGAPIAFVVLQPGFA
DAGELSLEPAADDVHRDPAIGQLVDRRQLLGHDRRMPGARQDRRDHLELLGGRQQGVADGHRLVLVLGAVAG
GEADLREGVVEAVAFRQLGQLAVVVDVPAGALLDLAHHQAAADVGDPVGEVDRLLLLAHRGYLRVGAWSGVY
EGTVPSRIHVFESMAYGGYGGGGLSSAGQPCCPAVARQTVRPASAATVRRRAVPRRTRRAGWPTPSHVPRRR
CAGCHGNRAWRR*
AnnotationID:6529GeneID:6528
AnnotatorUID: diggins
Modification Date/Time: 2006-02-09 08:08:05
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16285
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30156
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49530How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3864122Stop: 3862788
Length: 1335
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCTTGCCGAAATACTCCACTTCTTCGTGGAAGTGCAGGAAGGCCGACAGCACCAGGTCGACCCCGGCCGC
CTTCAGCGCGACGATGCGTTCGGCGATCTGCCGTGGCGTGCCGATCAGGTTGGTCTTGAAGCCGTCGTTGTA
TTGCACCAGGTCTTCGAAGGTGGATTTGGCCCAGTTGCCATCGCCCTCCGGCGAGGCCTTGCCGGCCTGTTT
CACCGCGTCGCCGAAGGCGTTCACCGCCTCGTAGTCGGCCTTGGCGATGATCTCGTCGAGCACCGCCCGCGC
TTCCTCCTCGGTGTCGCGGGCAATGATGAAGGCGTTCACTCCGACCTTGACCGAATGGCCGTTGGCCGCCGC
CTTGGCGCGGATGTCCTCGACCTGGGCGCGGATGCCGTCGATGCTGTTGCCGTTGGTGAAGTACCAGTCGGA
CACGCGCGAGGCCATGTCCCGCGCCGCCCGCGAGCTGCCGCCCTGGAAGATTTCCGGGTGCGGCTGCTGGAT
CGGCTTGGGTTTCAGGGTGTAGTCGTGGAAACGATAGAAATCGCCCTTGAAGGTGAAGTTTTCCTCGGTCCA
GATGCCTTTCAGCACGCGGATGAACTCTTCGGAGCGCCGATAGCGTTCGTCGTGCTCCAGCCAGGGTTCGCC
GATGCCGGTGAACTCTCCCTTGAACCAGCCGCTGACGATGTTCACCGCGACCCGGCCATTGGTCAGTTGGTC
GATCGTCGCCAGTTGCTTGGCCACGACCGCAGGATGCCAGGGGCCAGGCAGGATCGCCGCGATCACCTTGAG
CTTCTCGGTGGCCGCCAGCAGGGCGTGGCTGATGGCCACCGACTCGTGCTGGTACTCGGCGCCGTAGCCGGC
GGTGAAGCGGATCTGCGAGAGGGCGTAGTCGAAGCCGTTGCGTTCCGCCAACTGGGCCAGCTTGCGGTTGTA
GTCGATGTCCCAGCTGGTGCGCTGCTCGATCTTGCTCACCACCAGGCCGCCGCTGACGTTGGGGACCCAGTA
GGCGAAGTGGATCGGCTGTTGCTCTTGGCTCATCGGGGGTATCTCCGGGTAGGGGCGTGGTCCGGTGTCTAT
GAAGGAACCGTGCCATCCCGGATTCATGTTTTCGAATCAATGGCTTATGGGGGATATGGCGGAGGCGGCCTG
TCTTCTGCCGGACAGCCCTGTTGTCCCGCTGTTGCCCGGCAGACAGTCAGGCCGGCAAGCGCTGCAACAGTT
CGGCGGCGCGCAGTACCACGGCGTACTCGCCGTGCAGGTTGGCCAACGCCATCGCATGTACCTCGTCGGCGC
TGCGCGGGGTGCCATGGAAATCGGGCTTGGCGAAGGTGA