ViewGene
Locus Name:
GeneID:
Location:

GeneID:6524
TrivialName: PA14_12880
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_12880
PAO1 Ortholog Locus:
Sequence Length:825
Protein Length:274
Start: 1106396
Stop: 1105572
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGCGCAGGAAAAAAGCGCAGGAGCCTGGCCTCCTGCGCTTTTTTCGTTTTCGGGGAGCCGCTGGCGCTGCC
GCCCTCGAGGTTTTCCGCCGGATATTCCTACGGCGTTTGCAGTTGCTCGAGCAACGCATGGCAATCGGCAGC
GTGCCAGTCGGCCAGCTCCGGCCAGGGGTTTTCCGGCAGGTTGACCAGCACCGTGCGACTACCCGCGGCGCG
TCCGCAGTCGAGGTCGAAACGGTAGTCGCCGACCATCACCAGCTCCGCCGGCGTCACGTTCCAGCGTCGGGC
GATGCGCAGCAAGCCATCAGGGTCCGGCTTGGGCCGCGCCTCGCCGCGCCCGAGGATGTGCTCGGTGGGGAA
GCAGCCGCCCAGGCCGATCGCTTCGAGGGTGATCAGCGCCAACTGGTGGTCGTTGCGGGTCAGGATGCCCAG
GCGCACGCTGCGCCGCTGCAACTCGCGCACCAGTTCCAGTGCGCCCGGCGCCGGCCGCGCGGCCTCGGCCAG
GGCGCGCTCGTGTTCGAGCAGCCAGGCGTGCTTGGCCGCCGCCTCAGCCTCGGGCAGGGCGGCGAGGTGCAG
CAGGATGTCGTCCTGCTCGGGGATGTCCAGCGCTCGGCGGATCGCCGGGAAGTCGTGCACGGCCCGGGTCAG
GGTGCCGTCCATGTCGAACACCCAGTGGCGGATGTCGGCCAGCCTCACGCCCAGTCCTCACGCTTGCGGATC
AGGCCTTCCTGGCTCGACGAGGCGACCAGCTGGCCGCTCTGGTTGAAGATGCTGCCGCGCACGAAACCGCGT
GCGTTGCCGGCCCAGGGGCTGTCGATGGCGTAG
Translation:
MRRKKAQEPGLLRFFRFRGAAGAAALEVFRRIFLRRLQLLEQRMAIGSVPVGQLRPGVFRQVDQHRATTRGA
SAVEVETVVADHHQLRRRHVPASGDAQQAIRVRLGPRLAAPEDVLGGEAAAQADRFEGDQRQLVVVAGQDAQ
AHAAPLQLAHQFQCARRRPRGLGQGALVFEQPGVLGRRLSLGQGGEVQQDVVLLGDVQRSADRREVVHGPGQ
GAVHVEHPVADVGQPHAQSSRLRIRPSWLDEATSWPLWLKMLPRTKPRALPAQGLSMA*
AnnotationID:6525GeneID:6524
AnnotatorUID: urbach
Modification Date/Time: 2004-05-20 19:07:58
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:12843




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30149




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49526How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3847542Stop: 3848366

          
Length: 825


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGCGCAGGAAAAAAGCGCAGGAGCCTGGCCTCCTGCGCTTTTTTCGTTTTCGGGGAGCCGCTGGCGCTGCC 
GCCCTCGAGGTTTTCCGCCGGATATTCCTACGGCGTTTGCAGTTGCTCGAGCAACGCATGGCAATCGGCAGC 
GTGCCAGTCGGCCAGCTCCGGCCAGGGGTTTTCCGGCAGGTTGACCAGCACCGTGCGACTACCCGCGGCGCG 
TCCGCAGTCGAGGTCGAAACGGTAGTCGCCGACCATCACCAGCTCCGCCGGCGTCACGTTCCAGCGTCGGGC 
GATGCGCAGCAAGCCATCAGGGTCCGGCTTGGGCCGCGCCTCGCCGCGCCCGAGGATGTGCTCGGTGGGGAA 
GCAGCCGCCCAGGCCGATCGCTTCGAGGGTGATCAGCGCCAACTGGTGGTCGTTGCGGGTCAGGATGCCCAG 
GCGCACGCTGCGCCGCTGCAACTCGCGCACCAGTTCCAGTGCGCCCGGCGCCGGCCGCGCGGCCTCGGCCAG 
GGCGCGCTCGTGTTCGAGCAGCCAGGCGTGCTTGGCCGCCGCCTCAGCCTCGGGCAGGGCGGCGAGGTGCAG 
CAGGATGTCGTCCTGCTCGGGGATGTCCAGCGCTCGGCGGATCGCCGGGAAGTCGTGCACGGCCCGGGTCAG 
GGTGCCGTCCATGTCGAACACCCAGTGGCGGATGTCGGCCAGCCTCACGCCCAGTCCTCACGCTTGCGGATC 
AGGCCTTCCTGGCTCGACGAGGCGACCAGCTGGCCGCTCTGGTTGAAGATGCTGCCGCGCACGAAACCGCGT 
GCGTTGCCGGCCCAGGGGCTGTCGATGGCGTAG