ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6519

TrivialName: PA14_13080

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_13080

PAO1 Ortholog Locus:

Sequence Length: 1980

Protein Length: 659

Start: 1122192

Stop: 1124171

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG30261.1|AF307334_7 (AF307334) unknown [Ectothiorhodospira shaposhnikovii] Identities = 108/318 (33%), Positives = 147/318 (46%), Gaps = 3/318 (0%)

Sequence:

TTGGCGTGCGGCGTTCATCCTGCCCGGCGGGGTGGCCATCCTGCTCGGCATCGGCTTTTTCTTCTGCGTGCG
CGAGGAGCCATCGCCGCACCTGTCGGCCAAGGCCGCGGCGCGTGGCGAGGACAGCGAGGGTCTGTCGATGCG
CCGGGTGTTCGGCGTGCTGGCGCTGGTCACCGCCACCGGCGGGGTGGTGTTCAACGCCAGCACCGTGACCTA
CCCGAAGCTGTTCCAGGAGCGCCTGAGCGACTGGCTGGCGTCGCCGCAGACCCTTGGCGTGGTGGTCAGCCT
GGCCTATGCCTTCGGCGCGGTGGCGCAACTGATCATGGGCCGCCTGATCGATCGCCTGAACCTGAAGTTGCC
GTTCGTCTTCCTCACCTTCTGCCAGGTGCCGCTGCTGCTGGCCCTGGCCTACGGCCACGGCAGCGCAGTGGT
ACTGTTCGGCGCGCTGTTCATGTTCGCGGTGTTCGGCCAGGTGACGGTGAACGACGCGATGGTCGCCCACTT
CGTCGCGCCGCAGTGGCAGGCGCGGGTCTTCGCCCTGCGCTATTTCCTGTCGTTCGGCGCCAGCGCGGCGGC
GATCCCGATGATCGCCTACCTGGAGCCACGGCAGGGGCTGCTGGGGTTGTACCTGGTACTGGCGGGCTTCGC
CGCGCTGACCTTCGCCGCGGCGCTGGTGTTTCCGCGTCCGGCGCGCAGCGCCGCGGTGGGCACCTGAGGAAG
AGGGCGCCCGGACAGTGCGAGCCGGCCGGGCGCCGATGGCTCAACGCCGTATCAGAGCAGTTCGACCGCCAC
GGCGGTGGCTTCGCCGCCGCCGATGCACAGCGAGGCGACGCCGCGCTTGCCGCCTTTCTGGCGCAGGGCGTT
GATCAGGGTGAGGATGATCCGCGAGCCGGTGGAGCCGACCGGATGGCCCTGGGCGCAGGCGCCGCCATAGAC
ATTGACCTTGGCATGATCGAGGCCGTGTTCGCGCATGGCGAGCATGGTGACCATGGCGAAGGCTTCGTTGAT
CTCGAACAGGTCGACGTCGTCCTTGTTCCAGCCGGTCCTGGCGAACAGGTTGGTCATCGCGCCGATCGGCGC
CAGGGTGAACTCGCTCGGGTCCTGGCTCTGGGTGGCATGGCCGACGATTCGCGCCAGCGGCTTCAGGCCACG
GCGCTGGGCTTCCTCGGCGGTCATCAGGACCAGCGCGGAGGCGCCGTCGGAGATCGAGCTGGCATTGGCGGC
GGTGATGGTGCCGTCCTTGCGGAACGCCGGCTTGAGGCTCGGGATCTTCTCCAGGTTGGCGGTCAGCGGTTG
CTCGTCGTCCTTCACCACGCTCTCGCCCTTGCGGCTGGTGACGGTGACCGGGACGATTTCCGCCGCCAGCGA
GCCATCGGCGATGGCGGCCTGGGCGCGCTTGAGCGATTCGATGGCATAGGCGTCCATCTCCTCGCGGGTCAC
GCCGTACTTGTCGGCGGTCTCCTGGGCGAACGAACCCATCAAACGGCCGGTACGGGCGTCCTCGAGGCCGTC
GAGGAACATGTGGTCCTTGATCTCGCCGTGGCCCATGCGCAGGCCGCTGCGGGCTTTCTCCAGGACATAGGG
CGCGTTGGACATGCTTTCCATGCCACCGGCGACCATCACCTGGTTGGTGCCAGCCTTGAGCAGGTCGTGGGC
CAGCATCACCGCCTTCATCCCGGAGCCGCACAGCTTGTTGATGGTGGTGCAGCCGGTGGCGGCGGGCAGGCC
GGCCGCCAGCGCGGCCTGGCGGGCCGGGCCCTGCTTCAGGCCGGCGGGCAGGACGCAACCCATGATCACTTC
CTGTACGTCCTCGGCGGCGATGCCGGCGCGCTGCACCGCTTCGCGGATCACGACGGCACCCAGGTCGACCGC
GGAAACGCCGGTCAGGCTGCCCTGGAAGCCGCCCATAGGAGTACGGGCGCCGGCGACGATGACGATATCGGA
CATGGAACGTTACCTCTTGTTCTGGATAGGGTCTGA

Translation:

MACGVHPARRGGHPARHRLFLLRARGAIAAPVGQGRGAWRGQRGSVDAPGVRRAGAGHRHRRGGVQRQHRDL
PEAVPGAPERLAGVAADPWRGGQPGLCLRRGGATDHGPPDRSPEPEVAVRLPHLLPGAAAAGPGLRPRQRSG
TVRRAVHVRGVRPGDGERRDGRPLRRAAVAGAGLRPALFPVVRRQRGGDPDDRLPGATAGAAGVVPGTGGLR
RADLRRGAGVSASGAQRRGGHLRKRAPGQCEPAGRRWLNAVSEQFDRHGGGFAAADAQRGDAALAAFLAQGV
DQGEDDPRAGGADRMALGAGAAIDIDLGMIEAVFAHGEHGDHGEGFVDLEQVDVVLVPAGPGEQVGHRADRR
QGELARVLALGGMADDSRQRLQATALGFLGGHQDQRGGAVGDRAGIGGGDGAVLAERRLEARDLLQVGGQRL
LVVLHHALALAAGDGDRDDFRRQRAIGDGGLGALERFDGIGVHLLAGHAVLVGGLLGERTHQTAGTGVLEAV
EEHVVLDLAVAHAQAAAGFLQDIGRVGHAFHATGDHHLVGASLEQVVGQHHRLHPGAAQLVDGGAAGGGGQA
GRQRGLAGRALLQAGGQDATHDHFLYVLGGDAGALHRFADHDGTQVDRGNAGQAALEAAHRSTGAGDDDDIG
HGTLPLVLDRV*

AnnotationID:6520 GeneID:6519

AnnotatorUID: urbach

Modification Date/Time: 2004-03-22 13:01:04

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

>emb|CAA16067.1| (AL021246) PE_PGRS [Mycobacterium tuberculosis H37Rv] Length = 1660
 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 165/644 (25%), Positives = 194/644 (30%), Gaps = 114/644 (17%)

Structural Features:

Genomic Context:

Comment:

ReferenceID:16278

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30140