ViewGene

Locus Name:
GeneID:
Location:

GeneID:6510
TrivialName: PA14_13400
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13400
PAO1 Ortholog Locus:
Sequence Length:1836
Protein Length:611
Start: 1151914
Stop: 1153749
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: dbj|BAB97889.1| (AP005275) Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
Identities = 130/481 (27%), Positives = 204/481 (42%), Gaps = 56/481 (11%)
Sequence:
ATGGGGAGGGGAGCCTGGGAGGAGGGAAGGAGGCGTTTCGCGCAGCGTCGCGTTCGCTTTGCCTGCGCAGGG
GCTGTCCGCCGATACCGCGCTGGAGCGACGGATAGCCGCGATAGGGTTATCCGCCCTGCGCCGAGACCGCCG
CGGGAGGAGACAGGGAGGCTGTCCCTGGCTCCTCCCGTGCGATCAGTGATGCTCGCGCGTCGCGCGGAAGCG
GATGTCCGGCCAGCGTTCTTCCATCAGGCTGAGGTTGACGCGGGTCGGCGCCAGGTAGGTGAGGTGCCCGCC
GCCGTCCACGGAGAGGTTCTCGAAGGCCTTGTCCTTGAACTCCTTGAGCTTCTTCTCGTCGTCGCACTCGAT
CCAGCGTGCCGACCAGACGTTGATCGCCTCGTAGGCGCACTCGACCTTGTATTCCTCCTTCAGGCGGCTGGC
GACCACGTCGAACTGCAGCACGCCCACCGCACCGAGGATGATGTCGTTGTTGCGCTCGGGGAAGAACACCTG
GGTCGCACCTTCCTCGGCCAGTTCCTGCAGGCCCTGGCGCAACTGCTTGGACTTCAGCGGGTCTTTCAGGCG
CACGCGGCGGAACAGTTCCGGGGCGAAGTGCGGGATGCCGGTGAAACCGAAGTTCTCGCCTTCGCTGAAGGT
GTCGCCGATCTGGATGGTGCCGTGGTTGTGCAGGCCGATGATGTCGCCGGCATAGGCCTCTTCCAGTTGCTC
GCGCTCGGAGGAGAAGAAGGTCAGCGCGTCGGCGATCTTCACGTCCTTGCCCAGGCGCACGTGGCGCATCTT
CATGCCTTTCTCGTACTTGCCCGAGCAGATGCGCATGAAGGCGATGCGGTCGCGGTGCTTGGGATCCATGTT
CGCCTGGATCTTGAACACGAAGCCGGAGAACTTCTCCTCGGTCGGCTCCACGCTGCGTTCGTGGGTGGCGCG
CGACAGCGGCTGCGGCGCCCAGTCGACGATGCAGTCGAGGACCTGGTCGACGCCGAAGTTGCCCAGCGCGGT
GCCGAAGAACACCGGGGTCATCTCGCCCTTGAGGAAGGCGTCCTTGTCGAATTCGTGGCAGGCGCCCTGCAC
CAGCTCCAGCTCCTCGACGAAATTGTCGTAGAGATCGCCGAGGTGGGCGCGGGCTTCGTCGGAGTCGAGCTT
TTCGATGACCTTGGTCTCGATGCGCTCGTGGCCGTGGCCCGGGACGTAGACGATGATCCTGTCGTCGGCCAG
GTGGTAGACGCCCTTGAAGTCCTTGTAGCAGCCGATCGGCCAGGTGATCGGCGCGGCCTTGATCTTCAGCAC
CGCCTCGATCTCGTCGAGCAGCTCGATGGGGTCGCGGATGTCGCGGTCGAGCTTGTTGATGAAGCTGACGAT
GGGCGTGTCACGCAGCCGGCAGACTTCCATCAGGGCGATGGTCCGCGGTTCGACGCCCTTGCCGCCGTCGAG
CACCATCAGCGCCGAGTCCACCGCGGTCAGGGTGCGGTAGGTGTCTTCGGAGAAGTCTTCGTGGCCGGGGGT
GTCGAGCAGGTTGATCATGTGCTCGCGGTAGGGGAACTGCATCACCGAGGTGGTGATGGAGATGCCGCGCTG
CTTTTCCATCTCCATCCAGTCGGACGTGGCGTGGCGGTCGGACTTGCGCGACTTCACGGTACCGGCGACGGC
GATCGCCTTGCCCATCAGCAGGAGCTTCTCGGTGATGGTGGTCTTACCGGCGTCGGGGTGGGAAATGATCGC
GAAGGTACGGCGCTTCGCGACTTCGGCGGCCTGAGTGGTCATGGATGCGTGCCTGCTGGAATCCGTTGGCGT
GGGCGCGGGACGGCCCGGAAAAACGCGGGATTATAG
Translation:
MGRGAWEEGRRRFAQRRVRFACAGAVRRYRAGATDSRDRVIRPAPRPPREETGRLSLAPPVRSVMLARRAEA
DVRPAFFHQAEVDAGRRQVGEVPAAVHGEVLEGLVLELLELLLVVALDPACRPDVDRLVGALDLVFLLQAAG
DHVELQHAHRTEDDVVVALGEEHLGRTFLGQFLQALAQLLGLQRVFQAHAAEQFRGEVRDAGETEVLAFAEG
VADLDGAVVVQADDVAGIGLFQLLALGGEEGQRVGDLHVLAQAHVAHLHAFLVLARADAHEGDAVAVLGIHV
RLDLEHEAGELLLGRLHAAFVGGARQRLRRPVDDAVEDLVDAEVAQRGAEEHRGHLALEEGVLVEFVAGALH
QLQLLDEIVVEIAEVGAGFVGVELFDDLGLDALVAVARDVDDDPVVGQVVDALEVLVAADRPGDRRGLDLQH
RLDLVEQLDGVADVAVELVDEADDGRVTQPADFHQGDGPRFDALAAVEHHQRRVHRGQGAVGVFGEVFVAGG
VEQVDHVLAVGELHHRGGDGDAALLFHLHPVGRGVAVGLARLHGTGDGDRLAHQQELLGDGGLTGVGVGNDR
EGTALRDFGGLSGHGCVPAGIRWRGRGTARKNAGL*
AnnotationID:6511GeneID:6510
AnnotatorUID: urbach
Modification Date/Time: 2004-03-10 18:06:43
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:12816
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30123
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49512How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3802024Stop: 3800189
Length: 1836
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGGGAGGGGAGCCTGGGAGGAGGGAAGGAGGCGTTTCGCGCAGCGTCGCGTTCGCTTTGCCTGCGCAGGG
GCTGTCCGCCGATACCGCGCTGGAGCGACGGATAGCCGCGATAGGGTTATCCGCCCTGCGCCGAGACCGCCG
CGGGAGGAGACAGGGAGGCTGTCCCTGGCTCCTCCCGTGCGATCAGTGATGCTCGCGCGTCGCGCGGAAGCG
GATGTCCGGCCAGCGTTCTTCCATCAGGCTGAGGTTGACGCGGGTCGGCGCCAGGTAGGTGAGGTGCCCGCC
GCCGTCCACGGAGAGGTTCTCGAAGGCCTTGTCCTTGAACTCCTTGAGCTTCTTCTCGTCGTCGCACTCGAT
CCAGCGTGCCGACCAGACGTTGATCGCCTCGTAGGCGCACTCGACCTTGTATTCCTCCTTCAGGCGGCTGGC
GACCACGTCGAACTGCAGCACGCCCACCGCACCGAGGATGATGTCGTTGTTGCGCTCGGGGAAGAACACCTG
GGTCGCACCTTCCTCGGCCAGTTCCTGCAGGCCCTGGCGCAACTGCTTGGACTTCAGCGGGTCTTTCAGGCG
CACGCGGCGGAACAGTTCCGGGGCGAAGTGCGGGATGCCGGTGAAACCGAAGTTCTCGCCTTCGCTGAAGGT
GTCGCCGATCTGGATGGTGCCGTGGTTGTGCAGGCCGATGATGTCGCCGGCATAGGCCTCTTCCAGTTGCTC
GCGCTCGGAGGAGAAGAAGGTCAGCGCGTCGGCGATCTTCACGTCCTTGCCCAGGCGCACGTGGCGCATCTT
CATGCCTTTCTCGTACTTGCCCGAGCAGATGCGCATGAAGGCGATGCGGTCGCGGTGCTTGGGATCCATGTT
CGCCTGGATCTTGAACACGAAGCCGGAGAACTTCTCCTCGGTCGGCTCCACGCTGCGTTCGTGGGTGGCGCG
CGACAGCGGCTGCGGCGCCCAGTCGACGATGCAGTCGAGGACCTGGTCGACGCCGAAGTTGCCCAGCGCGGT
GCCGAAGAACACCGGGGTCATCTCGCCCTTGAGGAAGGCGTCCTTGTCGAATTCGTGGCAGGCGCCCTGCAC
CAGCTCCAGCTCCTCGACGAAATTGTCGTAGAGATCGCCGAGGTGGGCGCGGGCTTCGTCGGAGTCGAGCTT
TTCGATGACCTTGGTCTCGATGCGCTCGTGGCCGTGGCCCGGGACGTAGACGATGATCCTGTCGTCGGCCAG
GTGGTAGACGCCCTTGAAGTCCTTGTAGCAGCCGATCGGCCAGGTGATCGGCGCGGCCTTGATCTTCAGCAC
CGCCTCGATCTCGTCGAGCAGCTCGATGGGGTCGCGGATGTCGCGGTCGAGCTTGTTGATGAAGCTGACGAT
GGGCGTGTCACGCAGCCGGCAGACTTCCATCAGGGCGATGGTCCGCGGTTCGACGCCCTTGCCGCCGTCGAG
CACCATCAGCGCCGAGTCCACCGCGGTCAGGGTGCGGTAGGTGTCTTCGGAGAAGTCTTCGTGGCCGGGGGT
GTCGAGCAGGTTGATCATGTGCTCGCGGTAGGGGAACTGCATCACCGAGGTGGTGATGGAGATGCCGCGCTG
CTTTTCCATCTCCATCCAGTCGGACGTGGCGTGGCGGTCGGACTTGCGCGACTTCACGGTACCGGCGACGGC
GATCGCCTTGCCCATCAGCAGGAGCTTCTCGGTGATGGTGGTCTTACCGGCGTCGGGGTGGGAAATGATCGC
GAAGGTACGGCGCTTCGCGACTTCGGCGGCCTGAGTGGTCATGGATGCGTGCCTGCTGGAATCCGTTGGCGT
GGGCGCGGGACGGCCCGGAAAAACGCGGGATTATAG