ViewGene
Locus Name:
GeneID:
Location:

GeneID:6502
TrivialName: PA14_13700
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13700
PAO1 Ortholog Locus:
Sequence Length:702
Protein Length:233
Start: 1176516
Stop: 1177217
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: dbj|BAB62046.1| (D85415) ORF2~unknown product [Pseudomonas putida]
Identities = 61/217 (28%), Positives = 87/217 (40%), Gaps = 37/217 (17%)
Sequence:
TTGCGCCCAGTACGGGCCGATCGGGCGCAGGTATTCCTCGTCGATGGCGGCATCGATCTGCGCGTCGATGCT
GAACCAGCCGTAGCCCCAGGCGGCGAACACGCCGCCGGGACGCAGCACGCGCAGCAGCTCGCGGTTGAAGCG
CGAGTGGTCGAACCAGTGCCAGGCCTGGGCTACGCAGACCAGGTCGAAGGCGGCGTCGGGATAGTCGGTGGC
TTCGGCGTCCTGCACGCTGTAGCGGATACCCGGATGGATAACGGCGTGTTCGATCTGCTGCGCGCTGGTGTC
GCTGGCGAGGACTTCGCCGAAGTGCTGCGCCAGGCCGAGCGCGGCCTGGCCGGTACCGGTGGCGCAGTCCCA
GGCGCGCCGGCGCTGGCCGCAGAGCCCGGCGAGATGGCGGTAGAGCGCATCGGGATAACGCGGGCGGGCGCT
GGCGTAGGCAGCGGAGCCCTGGTCGAACAGACGGCGGGTTTCCATCGGGTCCTCCCTCGGTCAGTTGCCGAA
ACGCCCGTCCAGGCGTTCGGCGCGGAATTCCAGGGTGCTGGCGCGATAGCCCGGACGCAGCGGCGGCAGCGG
CAGGCAGTCGTGCCAGCTGTCGCCGCCGAGCAGGGCGTTCGGCGCCCGGTAGCGCGGGCTGTCGAAGCTGGT
GTCGGCCAGGTTGACGCTGTCGCCGGGGCGGTAGGCGGCGATCCTCCAGCGTAG
Translation:
MRPVRADRAQVFLVDGGIDLRVDAEPAVAPGGEHAAGTQHAQQLAVEARVVEPVPGLGYADQVEGGVGIVGG
FGVLHAVADTRMDNGVFDLLRAGVAGEDFAEVLRQAERGLAGTGGAVPGAPALAAEPGEMAVERIGITRAGA
GVGSGALVEQTAGFHRVLPRSVAETPVQAFGAEFQGAGAIARTQRRQRQAVVPAVAAEQGVRRPVARAVEAG
VGQVDAVAGAVGGDPPA*
AnnotationID:6503GeneID:6502
AnnotatorUID: diggins
Modification Date/Time: 2005-04-25 12:12:23
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16267




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30107




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49504How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3777422Stop: 3776721

          
Length: 702


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCGCCCAGTACGGGCCGATCGGGCGCAGGTATTCCTCGTCGATGGCGGCATCGATCTGCGCGTCGATGCT 
GAACCAGCCGTAGCCCCAGGCGGCGAACACGCCGCCGGGACGCAGCACGCGCAGCAGCTCGCGGTTGAAGCG 
CGAGTGGTCGAACCAGTGCCAGGCCTGGGCTACGCAGACCAGGTCGAAGGCGGCGTCGGGATAGTCGGTGGC 
TTCGGCGTCCTGCACGCTGTAGCGGATACCCGGATGGATAACGGCGTGTTCGATCTGCTGCGCGCTGGTGTC 
GCTGGCGAGGACTTCGCCGAAGTGCTGCGCCAGGCCGAGCGCGGCCTGGCCGGTACCGGTGGCGCAGTCCCA 
GGCGCGCCGGCGCTGGCCGCAGAGCCCGGCGAGATGGCGGTAGAGCGCATCGGGATAACGCGGGCGGGCGCT 
GGCGTAGGCAGCGGAGCCCTGGTCGAACAGACGGCGGGTTTCCATCGGGTCCTCCCTCGGTCAGTTGCCGAA 
ACGCCCGTCCAGGCGTTCGGCGCGGAATTCCAGGGTGCTGGCGCGATAGCCCGGACGCAGCGGCGGCAGCGG 
CAGGCAGTCGTGCCAGCTGTCGCCGCCGAGCAGGGCGTTCGGCGCCCGGTAGCGCGGGCTGTCGAAGCTGGT 
GTCGGCCAGGTTGACGCTGTCGCCGGGGCGGTAGGCGGCGATCCTCCAGCGTAG