ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6490

TrivialName: PA14_14070

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_14070

PAO1 Ortholog Locus:

Sequence Length: 1803

Protein Length: 600

Start: 1205257

Stop: 1207059

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens] Identities = 181/620 (29%), Positives = 210/620 (33%), Gaps = 105/620 (16%)

Sequence:

GTGGCAGAAGGTCGCCGGCCTGCGCGCGCAGCTGCCGGAGCTGTACGCGATCGTCGTGGTCGATCCGGCCAA
CCTGTTGCCGGCGCCGCAGCGCGAGGCGCTCAAGGCCCAGCGCGGGCCGCTGCCGGAGGGCGTGCTGGACTT
CGATACGCTGATCGCCGACTGCCCGGCAGACCGCCTGGAGAGCGGACGGGCGATCCATCCGGACGACGTCGC
TTCCTATTTCCATACCGGCGGCACCACCGGCACGCCGAAGCTGGCGCCGCACAGCCACTTCAACGAGGTGGC
GATGGCCGAGATCATGGGCCTGAACGCCGACTACGGGGTGGACGACGTGCTGCTCTGCGGCCTGCCGCTGTT
CCACGTCAACGGCGTGATGGTTACCGGCCTGGCGCCCTTCCATCGCGGCGCCCAGGTGCTCCTGGCCGGGCC
CCAGGGCTACCGCAATCCGACCCTGATCCAGGACTTCTGGAAGCTGGTGGAGCGCTACCGGGTCACCAGCTT
CAGTGGCGTGCCGACCATCTACGCGGCGTTGCTGCAGGTCCCCAGCGATGGCCGCGACCTGTCCAGCCTGCG
TTTCGCCCTGTGCGGCGCGGCGCCGATGCCGGTGGAGCTGATCCGCCAGTTCGAGGCGCGTACCGGGCTCAA
GGTGATCGAAGGCTACGGCCTCACCGAAGGTACCTGCGGCACCAGTTGCAACCCGCGTGGCGGCGAGCGCCG
GCCGGGTTCGATCGGCCTGCGCCTGCCGTACTGCCAGGTGAAGGTCGCGGTGCTCGACGGCGAGGGCAATTA
CCTGCGCGATGCCGCGCCGAACGAGGTGGGCAACCTCTGCCTGAAGGGCCCGACGGTGTTCAAGGGCTACCT
GCAACAGGACCGGAACCGCGATATCTGGGTCGGCGATGGCTGGTTCAATACCGGCGACCTCGGTCGTATCGA
CGAGGACGGCTACATCTGGCTCACCGGGCGCAGCAAGGACCTGATCATTCGCGGTGGCCACAACATCGACCC
ACAGATGATCGAAGAAGCGCTGCACCGGCATCCGGCCGTGGCCCTGGCGGCGGCGGTGGGCAAGCCGGACGC
CAAGGCCGGCGAGCTGCCGGTGGTGTATATCCAGCTCAAGCCCGGCGCCAGCGCCAGCGAGGAAGAGCTGCT
GGAACACGCCAGCCGCCACGTACCGGAGCGCGCGGCGGTGCCCAAGGATGTCTGGCTGATCGAGAGCATGCC
GGTCACCGCGGTGGGCAAGACCTTCAAGCCGGCGCTGCGCCTGGACGCGATCCGCCGGGTGCTGGAGGAGGA
AAGCCGGAGGATCGCCGAGGATATCCGCGTGGAGGTGGTCGCCGACGAGCGCCACGGCCAGCTCGCCCACCT
GCACGTTCCCGCGCTCGACGAAAGACGCCGGGCGGCGCTGGAAGAGCTGCTCGGCGGCTACGCGCTGAACTA
CCGGCTGCACGCCGTCTGAGAGAAGCTCCGGGCGTCAGAGGCGCTTGCGCAGCCAGGCGCCGATGTCGTGGA
TTTCCTCCAGGGACACCTCGTGGCCCATCGGGTAGTCGTGCCAGCCCACCTCCACGCCCTGCGCCTGCAAGG
CGTCATGGGCCGCGCGGCCGAGCGCCGGGTCGACCACGTCGTCCTGGCTGCCATGCAGGTGCAGGACCGGAA
TCCGCTTGTGGCGCTCGTCCAGCGCCAGGTCGTCGAAGGTCGGCGCGTAGGTGGATAGCGCCAGCACCCCGC
CGAGCGGCTGGGCGTAGCGGCGGAAGGCGGTATGCAGGACCACCGCGCCGCCCTGGGAGAAACCGGCGAGGA
TGA

Translation:

MAEGRRPARAAAGAVRDRRGRSGQPVAGAAARGAQGPARAAAGGRAGLRYADRRLPGRPPGERTGDPSGRRR
FLFPYRRHHRHAEAGAAQPLQRGGDGRDHGPERRLRGGRRAALRPAAVPRQRRDGYRPGALPSRRPGAPGRA
PGLPQSDPDPGLLEAGGALPGHQLQWRADHLRGVAAGPQRWPRPVQPAFRPVRRGADAGGADPPVRGAYRAQ
GDRRLRPHRRYLRHQLQPAWRRAPAGFDRPAPAVLPGEGRGARRRGQLPARCRAERGGQPLPEGPDGVQGLP
ATGPEPRYLGRRWLVQYRRPRSYRRGRLHLAHRAQQGPDHSRWPQHRPTDDRRSAAPASGRGPGGGGGQAGR
QGRRAAGGVYPAQARRQRQRGRAAGTRQPPRTGARGGAQGCLADREHAGHRGGQDLQAGAAPGRDPPGAGGG
KPEDRRGYPRGGGRRRAPRPARPPARSRARRKTPGGAGRAARRLRAELPAARRLREAPGVRGACAARRRCRG
FPPGTPRGPSGSRASPPPRPAPARRHGPRGRAPGRPRRPGCHAGAGPESACGARPAPGRRRSARRWIAPAPR
RAAGRSGGRRYAGPPRRPGRNRRG*

AnnotationID:6491 GeneID:6490

AnnotatorUID: diggins

Modification Date/Time: 2004-04-13 17:05:32

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

Genomic Context:

Comment:

ReferenceID:16253

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30084

Author/Investigator(s): GenNotator

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: RPSBLAST

Data:

URL:

ReferenceID:31704

Author/Investigator(s):

Title: CDD Search

PubMed:

MedLine:

Source:

Reference Type: Misc (text/plain)

Data: 6490_cdd.html

URL:

GC ORFID: `49492`	How Found: `Glimmer`
GC_TrimmedSeqID: `69`	Blast Result ID
Subject Sequence Name:	Glimmer Score:
Start: `3748681`	Stop: `3746879`
Length: `1803`
Start Codon: `GTG`	Truncated Start:
Stop Codon: `TGA`	Truncated Stop:
Homolog:	Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGCAGAAGGTCGCCGGCCTGCGCGCGCAGCTGCCGGAGCTGTACGCGATCGTCGTGGTCGATCCGGCCAA CCTGTTGCCGGCGCCGCAGCGCGAGGCGCTCAAGGCCCAGCGCGGGCCGCTGCCGGAGGGCGTGCTGGACTT CGATACGCTGATCGCCGACTGCCCGGCAGACCGCCTGGAGAGCGGACGGGCGATCCATCCGGACGACGTCGC TTCCTATTTCCATACCGGCGGCACCACCGGCACGCCGAAGCTGGCGCCGCACAGCCACTTCAACGAGGTGGC GATGGCCGAGATCATGGGCCTGAACGCCGACTACGGGGTGGACGACGTGCTGCTCTGCGGCCTGCCGCTGTT CCACGTCAACGGCGTGATGGTTACCGGCCTGGCGCCCTTCCATCGCGGCGCCCAGGTGCTCCTGGCCGGGCC CCAGGGCTACCGCAATCCGACCCTGATCCAGGACTTCTGGAAGCTGGTGGAGCGCTACCGGGTCACCAGCTT CAGTGGCGTGCCGACCATCTACGCGGCGTTGCTGCAGGTCCCCAGCGATGGCCGCGACCTGTCCAGCCTGCG TTTCGCCCTGTGCGGCGCGGCGCCGATGCCGGTGGAGCTGATCCGCCAGTTCGAGGCGCGTACCGGGCTCAA GGTGATCGAAGGCTACGGCCTCACCGAAGGTACCTGCGGCACCAGTTGCAACCCGCGTGGCGGCGAGCGCCG GCCGGGTTCGATCGGCCTGCGCCTGCCGTACTGCCAGGTGAAGGTCGCGGTGCTCGACGGCGAGGGCAATTA CCTGCGCGATGCCGCGCCGAACGAGGTGGGCAACCTCTGCCTGAAGGGCCCGACGGTGTTCAAGGGCTACCT GCAACAGGACCGGAACCGCGATATCTGGGTCGGCGATGGCTGGTTCAATACCGGCGACCTCGGTCGTATCGA CGAGGACGGCTACATCTGGCTCACCGGGCGCAGCAAGGACCTGATCATTCGCGGTGGCCACAACATCGACCC ACAGATGATCGAAGAAGCGCTGCACCGGCATCCGGCCGTGGCCCTGGCGGCGGCGGTGGGCAAGCCGGACGC CAAGGCCGGCGAGCTGCCGGTGGTGTATATCCAGCTCAAGCCCGGCGCCAGCGCCAGCGAGGAAGAGCTGCT GGAACACGCCAGCCGCCACGTACCGGAGCGCGCGGCGGTGCCCAAGGATGTCTGGCTGATCGAGAGCATGCC GGTCACCGCGGTGGGCAAGACCTTCAAGCCGGCGCTGCGCCTGGACGCGATCCGCCGGGTGCTGGAGGAGGA AAGCCGGAGGATCGCCGAGGATATCCGCGTGGAGGTGGTCGCCGACGAGCGCCACGGCCAGCTCGCCCACCT GCACGTTCCCGCGCTCGACGAAAGACGCCGGGCGGCGCTGGAAGAGCTGCTCGGCGGCTACGCGCTGAACTA CCGGCTGCACGCCGTCTGAGAGAAGCTCCGGGCGTCAGAGGCGCTTGCGCAGCCAGGCGCCGATGTCGTGGA TTTCCTCCAGGGACACCTCGTGGCCCATCGGGTAGTCGTGCCAGCCCACCTCCACGCCCTGCGCCTGCAAGG CGTCATGGGCCGCGCGGCCGAGCGCCGGGTCGACCACGTCGTCCTGGCTGCCATGCAGGTGCAGGACCGGAA TCCGCTTGTGGCGCTCGTCCAGCGCCAGGTCGTCGAAGGTCGGCGCGTAGGTGGATAGCGCCAGCACCCCGC CGAGCGGCTGGGCGTAGCGGCGGAAGGCGGTATGCAGGACCACCGCGCCGCCCTGGGAGAAACCGGCGAGGA TGA