ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6477

TrivialName: PA14_14620

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_14620

PAO1 Ortholog Locus:

Sequence Length: 2184

Protein Length: 727

Start: 1249440

Stop: 1247257

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC49570.1| (AP005950) ribonuclease E [Bradyrhizobium japonicum USDA 110] Identities = 38/136 (27%), Positives = 54/136 (39%), Gaps = 31/136 (22%)

Sequence:

ATGGTACCGATCTTGATATTCATCTCAGTCCCCTTAGATCCACAGCTTCTTGAAGTCACGCCCGCCGAAGAT
CAGGTTGACCATTGCGCGGGTGACCATGATGGCCGTGAACATCGAGGTGATGATGCCGAGCGACATGGTCAC
GGCAAATCCTTTCACCGGGCCGGTGCCCATGGCGTAGAGGATGCCGCCGACCAGCAGCGAGGTCAGGTTGGC
GTCGAGGATCGCGGTGAAGGCACGGTTGAAGCCTTCGTGGATCGCCCTCTGGACCGACATGCCATTGGCCAG
CTCCTCGCGTATCCGCGAGAAGATCAGCACGTTGGCGTCCACCGCCATGCCCATGGTCAGCACGATACCGGC
GATGCCCGGCAGGGTCAGGGTCGCGCCGAGGATCGACATCAGCGCTACCAGCATGACCATGTTGAAGGCCAG
CGCAACGGTGGCGATCACGCCGAAGAAACGGTAGATGACGATGATGAACAGCGATACGAAGAGCATGCCCCA
GAGCGACGCATCGACACCCTTGGCGATGTTGTCCGCCCCCAGGCTCGGGCCGATGGTGCGTTCTTCGGCGAA
GTACATCGGTGCAGCCAGGCCGCCGGCACGCAGCAGCAGGGCCAGTTCGGAGGACTCGCCCGGGCCATCGAG
GCCGGTGATGCGGAACTGGTTGCCCAGCGGCGACTGGATGGTCGCCAGACTGATGATCTGCTTCTCTTCCTT
GAACGCCGGAACCGCGACCTCCTTCTCGACGCCATCGACCATCTGCTTGGTGTAGCGGGTCACCGGCTTCTG
CTCGATGAACACCACCGCCATGCTGCGGCCGACGTTGTTGCGGGTGGCGCGGTTCATCAGCTCGCCGCCGTG
GCCATCCAGGCGGATGTTCACCTGCGGGCGGCCGTTCTCGTCGAAACTGGCGCTGGCGTCGGTGACCTGGTC
GCCGGTGATGATCACCCCGCGCTCCAGCGGCACCGGCGGACGGCGCGGCTCGCGGAACTCGAAGGTCTCGGT
GGCGGACTTCAGGGCGTCCGGCTCGGCGGCCAGGCGGAATTCGAGGTTGGCGGTCTTGCCGAGGATTCGCTT
GGCTTCCGCGGTGTCCTGCACGCCCGGCAGCTCGACCACGATGCGATTGGCGCCCTGGCGCTGCACCAGCGG
CTCGGATACGCCCAGCTCGTTGACCCGGTTGCGGACGGTGGTGAGGTTCTGCTTGATGGAGTACTCGCGGAT
TTCCGCCAGTTTGGCCTGGGTCAGGGCGACACGCAGGACCTGCAGGCCGTTGCGCTCTTCGGGCACGACCTC
GAAATCGCGGAAGTCCTTGGCGATCAGGCTGCGCGCCTTGTCCAGGGATTCGCTGTCGGTGAAGCCGAGCTG
GATCGCGCGATCCTGGATCGGCAGGCTGCGGTAGCGCACGCGCTCCTTGCGCAGCAGGCTCTTCACTTCGCT
TTCATAGACCTTCAGGCGGGCATCGACCGCCTTGTCCATGTCCACTTCCAGCAGGAAGTGCACGCCGCCGGA
CAGGTCCAGGCCGAGCTTCATTGGGCTGCCGCCCAGCTTGCGCAGCCACTCGGGAGTGGTCTGGGCCAGGTT
CAGCGCCACCACGTAGTCGTCGCCCAGGGTCCGGCGCACCACTTCCTTGGCGGGAAGCTGGTCGTCCTGCTT
GACCAGGCGGATCAGGCCGCCCTTCTTCGACAGGCTGTTGGCCTTCACCGCGATACCGGCGTCGGTCAGCGC
CTTGGCAGCGCGGTCGACGTCGGCCTGGGTGACCTGCAGCGCCGTGCTGGCGCCGCTGATCTGCACCGCCGG
GTCGTCCGGGTAGAGGTTGGGTGCGGAATAGATGAACCCGACGGCGAGGACCGCCAGGATCAGCAGATATTT
CCACAGAGGATACTTGTTGAGCATGACACCGCCCGTTATGACGCGGGGCGccTTGCGCGCCCCGTCATGTGT
TTAGGTGAAAATCAGATCGCTTTCAGGGTGCCTTTCGGCAGGGTCGCGGCAATCGCGGCCTTCTGGAACTTC
AGCTCGACGTTGTCGGAGACCTCGACGACGACGAAATCGTCGGCGACCTTGGTCACCTTGCCGGCGATACCG
CCGGAAGTGACGACTTCGTCACCTTTTTGCAGGTTGCCCAGCAGGTTCTTGTGTTCCTTGGCGCGCTTGGCC
TGGGGACGCCAGATCATCAGGTAG

Translation:

MVPILIFISVPLDPQLLEVTPAEDQVDHCAGDHDGREHRGDDAERHGHGKSFHRAGAHGVEDAADQQRGQVG
VEDRGEGTVEAFVDRPLDRHAIGQLLAYPREDQHVGVHRHAHGQHDTGDARQGQGRAEDRHQRYQHDHVEGQ
RNGGDHAEETVDDDDEQRYEEHAPERRIDTLGDVVRPQARADGAFFGEVHRCSQAAGTQQQGQFGGLARAIE
AGDAELVAQRRLDGRQTDDLLLFLERRNRDLLLDAIDHLLGVAGHRLLLDEHHRHAAADVVAGGAVHQLAAV
AIQADVHLRAAVLVETGAGVGDLVAGDDHPALQRHRRTARLAELEGLGGGLQGVRLGGQAEFEVGGLAEDSL
GFRGVLHARQLDHDAIGALALHQRLGYAQLVDPVADGGEVLLDGVLADFRQFGLGQGDTQDLQAVALFGHDL
EIAEVLGDQAARLVQGFAVGEAELDRAILDRQAAVAHALLAQQALHFAFIDLQAGIDRLVHVHFQQEVHAAG
QVQAELHWAAAQLAQPLGSGLGQVQRHHVVVAQGPAHHFLGGKLVVLLDQADQAALLRQAVGLHRDTGVGQR
LGSAVDVGLGDLQRRAGAADLHRRVVRVEVGCGIDEPDGEDRQDQQIFPQRILVEHDTARYDAGRLARPVMC
LGENQIAFRVPFGRVAAIAAFWNFSSTLSETSTTTKSSATLVTLPAIPPEVTTSSPFCRLPSRFLCSLARLA
WGRQIIR*

AnnotationID:6478 GeneID:6477

AnnotatorUID: diggins

Modification Date/Time: 2005-04-24 14:02:06

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12755

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30058