ViewGene
Locus Name:
GeneID:
Location:

GeneID:6476
TrivialName: PA14_14640
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_14640
PAO1 Ortholog Locus:
Sequence Length:969
Protein Length:322
Start: 1250356
Stop: 1249388
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCCGAACCAGAGCGCCTCAGGGGCGATCGTCGACGGTGTCCTTGGCCTGCGGCGGGATCAGGTCCTCGCT
GGTCAGGTTCAGCCAGATCAAGACCACGTTGGCGATGTAGATCGACGAGTAGGTACCCGCCATTACACCGAC
GAACAGGGCGATGGAGAAACCGAACAGGTTGTCGCCGCCGAAGAACAGCAGCGCGGCGATGGCCAGCAGCGT
GGAGACCGAGGTGGCGATGGTGCGCAACAGGGTCTGGCTGGTGGAGATGTTCAGGTTCTCGATCAGACTGGC
CTTGCGCAGCACGCGGAAGTTCTCGCGCACCCGGTCGAAGATCACGATGGTGTCGTTCAGCGAGTAACCGAC
CACCGCCAGCACCGCGGCGAGGACGGTCAGGTCGAAGGTCACCTGGAAGAACGACAGCACGCCCATCACGAT
GATCGCATCGTGCACCAGCGAGAGGATCGCCCCGAGGGCGAACTTCCACTGGAAGCGGAAGCCGACGTACAG
CAGGATGCCGCCCAGCGCCAGGAGCATGCCGAGGCCGCCCTGGTCGCGCAGTTCTTCACCCACCTGCGGGCC
GACGTACTCGACCCGCTTCAGGTTCGCCGGGTTGCCGGTATCGGCCTGCTGCAAGGCGGTAGCGACCTTCTT
GCCCAGTTCCGGGTCCTCGCTGGGCATCCGCACCAGCACGTCGCGGGCGTCGCCGAAGCTCTGCACCACAGC
GTCCTCGTAGCCGGCGCCGACCAGTTGACCACGCACCTTGCCGAGATCGGCCGGTTGTTCGTAGGTCAGCTC
GATCAGCGTACCGCCGGTGAAGTCGAGGCCGAAGTTGATGCCCTTGGTGAACCAGCTGCCCAGGGCGATGAC
GGTCAGGATCAGGGTGACGGCAAACGCGATGTTGCGGATGCCCATGAAGTTGATGGTACCGATCTTGATATT
CATCTCAGTCCCCTTAGATCCACAGCTTCTTGA
Translation:
MPNQSASGAIVDGVLGLRRDQVLAGQVQPDQDHVGDVDRRVGTRHYTDEQGDGETEQVVAAEEQQRGDGQQR
GDRGGDGAQQGLAGGDVQVLDQTGLAQHAEVLAHPVEDHDGVVQRVTDHRQHRGEDGQVEGHLEERQHAHHD
DRIVHQREDRPEGELPLEAEADVQQDAAQRQEHAEAALVAQFFTHLRADVLDPLQVRRVAGIGLLQGGSDLL
AQFRVLAGHPHQHVAGVAEALHHSVLVAGADQLTTHLAEIGRLFVGQLDQRTAGEVEAEVDALGEPAAQGDD
GQDQGDGKRDVADAHEVDGTDLDIHLSPLRSTAS*
AnnotationID:6477GeneID:6476
AnnotatorUID: diggins
Modification Date/Time: 2005-04-24 14:02:32
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16241




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:30056




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49478How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3703582Stop: 3704550

          
Length: 969


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGCCGAACCAGAGCGCCTCAGGGGCGATCGTCGACGGTGTCCTTGGCCTGCGGCGGGATCAGGTCCTCGCT 
GGTCAGGTTCAGCCAGATCAAGACCACGTTGGCGATGTAGATCGACGAGTAGGTACCCGCCATTACACCGAC 
GAACAGGGCGATGGAGAAACCGAACAGGTTGTCGCCGCCGAAGAACAGCAGCGCGGCGATGGCCAGCAGCGT 
GGAGACCGAGGTGGCGATGGTGCGCAACAGGGTCTGGCTGGTGGAGATGTTCAGGTTCTCGATCAGACTGGC 
CTTGCGCAGCACGCGGAAGTTCTCGCGCACCCGGTCGAAGATCACGATGGTGTCGTTCAGCGAGTAACCGAC 
CACCGCCAGCACCGCGGCGAGGACGGTCAGGTCGAAGGTCACCTGGAAGAACGACAGCACGCCCATCACGAT 
GATCGCATCGTGCACCAGCGAGAGGATCGCCCCGAGGGCGAACTTCCACTGGAAGCGGAAGCCGACGTACAG 
CAGGATGCCGCCCAGCGCCAGGAGCATGCCGAGGCCGCCCTGGTCGCGCAGTTCTTCACCCACCTGCGGGCC 
GACGTACTCGACCCGCTTCAGGTTCGCCGGGTTGCCGGTATCGGCCTGCTGCAAGGCGGTAGCGACCTTCTT 
GCCCAGTTCCGGGTCCTCGCTGGGCATCCGCACCAGCACGTCGCGGGCGTCGCCGAAGCTCTGCACCACAGC 
GTCCTCGTAGCCGGCGCCGACCAGTTGACCACGCACCTTGCCGAGATCGGCCGGTTGTTCGTAGGTCAGCTC 
GATCAGCGTACCGCCGGTGAAGTCGAGGCCGAAGTTGATGCCCTTGGTGAACCAGCTGCCCAGGGCGATGAC 
GGTCAGGATCAGGGTGACGGCAAACGCGATGTTGCGGATGCCCATGAAGTTGATGGTACCGATCTTGATATT 
CATCTCAGTCCCCTTAGATCCACAGCTTCTTGA