ViewGene

Locus Name:
GeneID:
Location:

GeneID:6474
TrivialName: PA14_14720
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_14720
PAO1 Ortholog Locus:
Sequence Length:1542
Protein Length:513
Start: 1255568
Stop: 1254027
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCGCCTGCCATTCGACCTGGGACAGGTCGACGCCCTCTTTGTACATATCCCACAGCGGCGACAGTTCGCG
CAGCTTGGAAACGGCCTCGACCACCTTCTTCGCGGCATAGTCGATCTCTTCCTCGGTGGTGAAGCGACCGAA
GGTGAAGCGGATGGAGCTATGCGCCAGTTCGTCGTTGCGGCCCAGGGCGCGCAATACGTAGGACGGTTCCAG
GGACGCCGAGGTACAGGCCGAACCGGAGGAGACCGCGAGGTCCTTGAGCGCCATGATCAGCGACTCGCCCTC
GACGTAGTTGAAGCTGACGTTGAGGTTGTGCGGGACGCGGGAGGTCATGCTGCCGTTGATGTAGAGCTCTTC
CAGGCCGTCGATCTGCGCGAAGAAGCGGTCGCGGAGCGCCAGCACGCGGGCGTTCTCCTGGGCCATTTCTTC
CTTGGCGATGCGGAACGCCTCGCCCATGCCGACGATCTGGTGGGTGGCCAGGGTGCCGGAACGCATGCCGCG
CTCATGGCCGCCGCCGTGCATCTGGCCCTCGATGCGGACGCGCGGCTTGCGCCGGACGTAGAGCGCGCCAAT
GCCTTTCGGGCCGTAGGTCTTGTGCGCGGAGAAGGACATCAGGTCGACCTTGAGCTTGTCCAGGTCGATCTC
GACCTTGCCGGTCGACTGTGCGGCGTCGACGTGGAACAGCACGCCGCGGGAGCGGGTCAGCTCGCCGATGGC
GGCGATGTCGTTGACGGTGCCGATCTCGTTGTTCACGTGCATGACCGAGACCAGGATGGTGTCGTCACGCAG
CGCCGCCTCGACCAGTGCCGGAGTGATCAGGCCATCTTCGCCCGGCTCCAGGTAGGTCACTTCGAAACCTTC
GCGCTCCAGCTGGCGGCAGGTGTCGAGGACCGCCTTGTGCTCGATCTTCGAGGTGATGATGTGCTTGCCCTT
GCCCGAGTAGAAGTGCGCGACGCCCTTGATCGCCAGGTTGTCGGACTCGGTGGCGCCGGAGGTCCAGACGAT
CTCGCGGGGATCGGCGTTGACCAGTTCGGCCACCTGGCGACGGGCGTTCTCCACGGCCTCCTCGGCTTTCCA
GCCGAACACGTGGGAACGCGAAGCCGGGTTGCCGAAGTTGCCGTCCATCAGCAGGCATTCGCTCATTTTCTG
GGCGACGCGGGGATCGACGGGAGTGGTCGCGGAGTAATCGAGGTAGATCGGCAATTTCATCAGGTAACTCCT
ACAGGCTGGCGCCCTGCTCAGTCGATGGCGGACGCTTCAATCTTGTCGAGACGAGGCGTCTTGCCTGAGCAA
CGGCGTTCGTCCTGGCGCAGCGCGACCTCCTGGACCTCCTGGCGGCTGACCAGATCGGCCAGGCTGATGCCG
CTGAGGAACTCATGGATCTGCAAACTGAGGTCGCACCACAGGTGGTGGGTCAGACAGGTATCGCCGGAGTGG
CAATCGCCCTGCCCCTGGCAGCGAGTCGCGTCGACGGATTCGTTGACCGCGTCGATCACCTGCGCCACATGG
ATGCCCGACATATGGCGGGACAGCTGGTAG
Translation:
MRLPFDLGQVDALFVHIPQRRQFAQLGNGLDHLLRGIVDLFLGGEATEGEADGAMRQFVVAAQGAQYVGRFQ
GRRGTGRTGGDREVLERHDQRLALDVVEADVEVVRDAGGHAAVDVELFQAVDLREEAVAERQHAGVLLGHFF
LGDAERLAHADDLVGGQGAGTHAALMAAAVHLALDADARLAPDVERANAFRAVGLVRGEGHQVDLELVQVDL
DLAGRLCGVDVEQHAAGAGQLADGGDVVDGADLVVHVHDRDQDGVVTQRRLDQCRSDQAIFARLQVGHFETF
ALQLAAGVEDRLVLDLRGDDVLALARVEVRDALDRQVVGLGGAGGPDDLAGIGVDQFGHLATGVLHGLLGFP
AEHVGTRSRVAEVAVHQQAFAHFLGDAGIDGSGRGVIEVDRQFHQVTPTGWRPAQSMADASILSRRGVLPEQ
RRSSWRSATSWTSWRLTRSARLMPLRNSWICKLRSHHRWWVRQVSPEWQSPCPWQRVASTDSLTASITCATW
MPDIWRDSW*
AnnotationID:6475GeneID:6474
AnnotatorUID: diggins
Modification Date/Time: 2005-04-24 12:12:12
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16239
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30052
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49476How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3698370Stop: 3699911
Length: 1542
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCGCCTGCCATTCGACCTGGGACAGGTCGACGCCCTCTTTGTACATATCCCACAGCGGCGACAGTTCGCG
CAGCTTGGAAACGGCCTCGACCACCTTCTTCGCGGCATAGTCGATCTCTTCCTCGGTGGTGAAGCGACCGAA
GGTGAAGCGGATGGAGCTATGCGCCAGTTCGTCGTTGCGGCCCAGGGCGCGCAATACGTAGGACGGTTCCAG
GGACGCCGAGGTACAGGCCGAACCGGAGGAGACCGCGAGGTCCTTGAGCGCCATGATCAGCGACTCGCCCTC
GACGTAGTTGAAGCTGACGTTGAGGTTGTGCGGGACGCGGGAGGTCATGCTGCCGTTGATGTAGAGCTCTTC
CAGGCCGTCGATCTGCGCGAAGAAGCGGTCGCGGAGCGCCAGCACGCGGGCGTTCTCCTGGGCCATTTCTTC
CTTGGCGATGCGGAACGCCTCGCCCATGCCGACGATCTGGTGGGTGGCCAGGGTGCCGGAACGCATGCCGCG
CTCATGGCCGCCGCCGTGCATCTGGCCCTCGATGCGGACGCGCGGCTTGCGCCGGACGTAGAGCGCGCCAAT
GCCTTTCGGGCCGTAGGTCTTGTGCGCGGAGAAGGACATCAGGTCGACCTTGAGCTTGTCCAGGTCGATCTC
GACCTTGCCGGTCGACTGTGCGGCGTCGACGTGGAACAGCACGCCGCGGGAGCGGGTCAGCTCGCCGATGGC
GGCGATGTCGTTGACGGTGCCGATCTCGTTGTTCACGTGCATGACCGAGACCAGGATGGTGTCGTCACGCAG
CGCCGCCTCGACCAGTGCCGGAGTGATCAGGCCATCTTCGCCCGGCTCCAGGTAGGTCACTTCGAAACCTTC
GCGCTCCAGCTGGCGGCAGGTGTCGAGGACCGCCTTGTGCTCGATCTTCGAGGTGATGATGTGCTTGCCCTT
GCCCGAGTAGAAGTGCGCGACGCCCTTGATCGCCAGGTTGTCGGACTCGGTGGCGCCGGAGGTCCAGACGAT
CTCGCGGGGATCGGCGTTGACCAGTTCGGCCACCTGGCGACGGGCGTTCTCCACGGCCTCCTCGGCTTTCCA
GCCGAACACGTGGGAACGCGAAGCCGGGTTGCCGAAGTTGCCGTCCATCAGCAGGCATTCGCTCATTTTCTG
GGCGACGCGGGGATCGACGGGAGTGGTCGCGGAGTAATCGAGGTAGATCGGCAATTTCATCAGGTAACTCCT
ACAGGCTGGCGCCCTGCTCAGTCGATGGCGGACGCTTCAATCTTGTCGAGACGAGGCGTCTTGCCTGAGCAA
CGGCGTTCGTCCTGGCGCAGCGCGACCTCCTGGACCTCCTGGCGGCTGACCAGATCGGCCAGGCTGATGCCG
CTGAGGAACTCATGGATCTGCAAACTGAGGTCGCACCACAGGTGGTGGGTCAGACAGGTATCGCCGGAGTGG
CAATCGCCCTGCCCCTGGCAGCGAGTCGCGTCGACGGATTCGTTGACCGCGTCGATCACCTGCGCCACATGG
ATGCCCGACATATGGCGGGACAGCTGGTAG