ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6472

TrivialName: PA14_14790

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_14790

PAO1 Ortholog Locus:

Sequence Length: 1887

Protein Length: 628

Start: 1258808

Stop: 1256922

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG23119.1| (AF069527) putative glutamate dehydrogenase [Haloferax mediterranei] Identities = 161/550 (29%), Positives = 233/550 (42%), Gaps = 40/550 (7%)

Sequence:

ATGGGGCAGAATCACGATCTGCGGCATCTTCGCTTATTCCTCGATTTCGTTGAGCCGGCGGCCGGAGAGCGC
GGCCTTGACGGTCGCGTCCATCCGCCGTGCGGCGAAAGCGTCGGTCACCTGGGACAGGCGCTTGATCTGGTT
CTCGATGGCCGCGGTGTCGCTACCACCGGCCAGTTCACGCAAGGTGTCCATCTGCGCCGCGATGGCCAGGCG
CTCCTCTTCGTCCAGGAGCCGCTCGCCGTCGACGTCCAGCGCCGATTGCACGGCCTCCAGCAGCCGCTGCGC
CTCGACCTGCTGTTCGCGCAGGGCGCGGGCAGCCTTGTCGTCGCCGGCGTAGTCGAAGGAGTCCTTGAGCAT
CCGCGCGATCTCGCCGTCGGTCAGCCCATAGGACGGCTTGACCTGGATGCTGGCCTCGACGCCGGAACTCAG
TTCGCGTGCGGACACGCCGAGCAAGCCGTCGGCGTCGACCTGGAAGGTCACCCGGATTTTCGCCGCGCCCGC
CACCATCGGCGGAATGCCGCGCAGCTCGAAGCGCGCCAGCGAACGACAATCCTTCACCAGCTCGCGCTCGCC
CTGCAGCACGTGGATCATCATGGCCGTCTGGCCGTCCTTGTAGGTGGTGAACTCCTGGGCGCGCGCCACCGG
GATGGTGGTATTACGCGGAATCACCTTCTCCATCAGCCCGCCCATGGTTTCCAGGCCCAGCGACAGCGGAAT
GACGTCCAGCAGCAGCAATTCCTCGCCGCGCTTGTTGCCGGCCAGGGCATCGGCCTGGATGGCCGCGCCGAT
GGCGACCACCTGGTCCGGATCGATATCGGTCAGCGGCTCGCAGCCGAACAACTCGCCAACCGCCGTGCGCAC
ACGGGGCACGCGGGTCGAGCCACCGACCATCACCACAGAGCGGATTTCTTCCAGATCGACACCGGAGTCGCG
CACCGCTCGGCGGCAGGACTTCAGGCTGCGAGCGACGAACGGCTCGATCAACTCGTCGAGCGTCGCCCGGCT
CAGCTCGCCGCTCCAGTCGCCATAGGCGACCCGGACCGACGCCTCATCGGTAAGACGCTCCTTGGCCGCACA
GGCGATTTGCAGCAACTGCCGCTGGCTGCCCGGGTCCAGATCGGCAGAAAGGCCAGCCTGCTCGATCACCCA
GCCAGCGATGGCATGGTCGAAGTCGTCGCCACCCAGGGCCGTATCGCCGCCGGTGGCCAGAACTTCGAAGAC
ACCGCGGGTCAGGCGCAGGATGGAAATGTCGAAGGTTCCACCACCCAGGTCATAGATGGCCACCAGGCCTTC
CGCGCCCTTGTCCAGGCCGTAGGCCACGGCGGCGGCGGTCGGCTCGTTGAGCAGGCGCAGGACGTTCAGTCC
GGCCAGGCGCGCGGCATCCTTGGTAGCCTGGCGCTGGGCGTCGTCGAAATAGGCCGGCACGGTGATCACCGC
ACCCACCAGCTCGCCACCGAGGGTGGTTTCGGCGCGCTGGCGCAGCTCACGCAGGATGTCCGCCGAGACTTC
CACAGGACTCTTCAGCCCCTGTACGGTCTCGATGAAGGGCATGTGCGACTCGCCCTGGCGGAAGCGGTAGGG
CAATTGCTCGCCCAGTTGCTTGACGTCCTCCAGGCCGCGCCCCATCAGACGCTTGACCGAAATGATGGTATT
GAAGGGATCCTTCGCGGCAGCCGCGCGGGCGCTCTCACCCACTTCCGCCCGCTCGGCGTGATAACGCACCGC
GGAAGGCAGGATCAGGCGCCCCTGCGCATCCGGCAAGGGCTCGGCGACGCCGCTACGCACCGCGGCGACCAG
CGAATTGGTGGTACCCAGGTCGATCCCAACCGCCAGGCGACGCTCATGGGGCTTGGGACTCTGACCGGGCTC
GGCGATCTGCAGTAG

Translation:

MGQNHDLRHLRLFLDFVEPAAGERGLDGRVHPPCGESVGHLGQALDLVLDGRGVATTGQFTQGVHLRRDGQA
LLFVQEPLAVDVQRRLHGLQQPLRLDLLFAQGAGSLVVAGVVEGVLEHPRDLAVGQPIGRLDLDAGLDAGTQ
FACGHAEQAVGVDLEGHPDFRRARHHRRNAAQLEARQRTTILHQLALALQHVDHHGRLAVLVGGELLGARHR
DGGITRNHLLHQPAHGFQAQRQRNDVQQQQFLAALVAGQGIGLDGRADGDHLVRIDIGQRLAAEQLANRRAH
TGHAGRATDHHHRADFFQIDTGVAHRSAAGLQAASDERLDQLVERRPAQLAAPVAIGDPDRRLIGKTLLGRT
GDLQQLPLAARVQIGRKASLLDHPASDGMVEVVATQGRIAAGGQNFEDTAGQAQDGNVEGSTTQVIDGHQAF
RALVQAVGHGGGGRLVEQAQDVQSGQARGILGSLALGVVEIGRHGDHRTHQLATEGGFGALAQLTQDVRRDF
HRTLQPLYGLDEGHVRLALAEAVGQLLAQLLDVLQAAPHQTLDRNDGIEGILRGSRAGALTHFRPLGVITHR
GRQDQAPLRIRQGLGDAATHRGDQRIGGTQVDPNRQATLMGLGTLTGLGDLQ*

AnnotationID:6473 GeneID:6472

AnnotatorUID: diggins

Modification Date/Time: 2005-04-24 11:11:47

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

>gb|AAG23119.1| (AF069527) putative glutamate dehydrogenase [Haloferax
           mediterranei]
          Length = 959

 Score =  178 bits (451), Expect = 1e-43
 Identities = 161/550 (29%), Positives = 233/550 (42%), Gaps = 40/550 (7%)

Structural Features:

CDD: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12749

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30049