ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6470

TrivialName: PA14_14870

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_14870

PAO1 Ortholog Locus:

Sequence Length: 2526

Protein Length: 841

Start: 1265454

Stop: 1262929

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG19832.1| (AE005068) Vng1548c [Halobacterium sp. NRC-1] Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 17/133 (12%)

Sequence:

ATGTCACCCCAATCACTCCTATTCTTTATGTTCTCAAGCCTGTGCCAGACAGGCTGCCAGGTGCTCGGGCAG
AGCATCCCAGGCAATGCTTTGTTGCTCGCCCTCGTCACGCAGGGGCTTGAAACCTACCACGCGATTGGCCAC
CTCGTCCTCCCCGAGGATCAGGGCAAAGCGCGCGCCGCTCTTGTCGGCCTTCTTGAACTGGCTCTTGAAGCT
ACCGGCGCCGGCGTTGACCAGCAAGCGTATGCCGGGAATGGCGCTGCGCAACTGTTCGGCCAGGGTCAGGGC
GGCCAGCTCGGCCGGTTCGCCGAAGGCGCAGACGTAGAGGTCGGCCGGACGGTTCAGTTCGGCGGGGATCAC
CCCCAAGGTTTCCAGCAGCAGCACCAGGCGTTCCACGCCCATGGCGAAACCGACGCCCGGGGTCGGCTTGCC
GCCGAACTGGCTGACCAGCCCGTCGTAGCGGCCACCGCCGCAAACGGTGCCCTGGGCGCCAAGCTTGTCGGT
GACCCACTCGAAAGCCGTGCGGCAGTAATAGTCCAGGCCGCGCACCAGCTTCTGGTTGATTTCGTAGCGCAG
TCCGACAGCATCCAGGCGGGCCTTGAGACCCTCGAAGTGGGCGATCGATTCTTCGTCGAGATAGTCGTGCAG
GGTCGGCGCGCCGACCAGCAACGCCTGGGTGCTCTCCACCTTGCTGTCGAGGATTCGCAGCGGATTGGTGGT
CATGCGCCGCTGGCTGTCTTCGTCGAGTTGCTCGAAGCGCTCCTGCAGATAGGCCACCAGGGCCTCGCGATA
GCGTGCGCGGGCCTCGCTGGAACCGAGGGTGTTGAGCTGCAGGGTCACCGCGTCGGCCATGCCGAGCTTCTG
CCACAGGCGCCAGGTGAGGATGATCAACTCGGCGTCGATGTCCGGACCGGGCAGGTTGAAGACTTCCACGCC
GATCTGGTGGAACTGCCGGTAGCGACCTTTCTGCGGTTTCTCGTAACGGAACATCGGCCCGGTGTACCAGAG
CTTCTGCACCTGGCCACCACCGCTCAGGCCGTGCTCCAGCACGGCGCGCACGCAACCGGCGGTACCTTCCGG
ACGCATGGTCAGGGATTCGCCGTTGCGGTCGAGGAAGGTGTACATCTCCTTGTCGACCACGTCGGTACCTTC
GCCGATGCCGCGGGCGAAGAGTTCGGTGAACTCGAGGATGGGCAGGCGGATCTCGCTGTAGCCGTAGCCGTC
CAGCAGGCCGGCGAAGGTGCGTTCCAGATAGCGCCAGGCCGGAGTCTGCTCCGGCAGGATGTCGTTCATGCC
ACGAATGGCTTGCAGGGACTTGCTCACGTAGGGTCCTTAAACGGGTCAGCCGCGGGCGATCAGGCTCGCATC
GGCCTCGGCCTTCTCGGCCGCCTTCTGGCGGATCAGCCGTTCCAGCTCGTCCACCAGGTTGTCGTTGGTCAG
TTTCTGCGACGGCTTGCCGTCGATATACACCAGGTTCGGAGTGCCGCCGGTGAGGCCGACATGGGCCTCCTT
GGCTTCGCCCGGACCGTTGACGACGCAACCGATCACGGCCACGTCCATCGGCACCAGCAGGTCCTCCAGGCG
CCCTTCCAGCTCGTTCATGGTCTTCACCACGTCGAAGTTCTGCCGCGAACAGCTCGGGCAGGCGATGAAGTT
GATGCCACGGGAGCGCAGGTGCAGGGACTTGAGGATGTCGAAACCGACCTTGATCTCCTCGACCGGATCGGC
AGCCAGGGAAATCCGGATGGTGTCGCCGATTCCCTCGGCCAGGAGCATGCCCAGCCCCACCGCCGACTTCAC
CGTGCCGGAGCGCAGGCCGCCGGCCTCGGTGATGCCCAGGTGCAGGGGCTGCTCGATCTGCCTGGCCAGCAG
GCGATAGGCGGCGACGGCCATGAAGACGTCGGAGGCCTTGACGCTGACCTTGAAGTTCTGGAAGTCCAGCTT
GTCGAGATGATCGACGTGGCGCATGGCCGATTCGAGCAGGGCTTCCGGGGTCGGTTCGCCGTATTTCTTCTG
CAGGTCCTTTTCCAGCGAACCGGCATTGACGCCGATACGGATCGGGATGTTGCGCTCGCGCGCGGCGTCGAC
CACGGCCTTGACCCGGTCCTCGCGACCGATGTTGCCCGGATTGATGCGCAGGCAGTCCACTCCCAGCTCGGC
GACGCGCAGGGCGATGCGATAGTCGAAGTGGATGTCGGCGACCAGCGGCACGTTGACCTGCTGCTTGATCTT
GCCGAACGCCTCGGCGGCGTCCATGTCGGGGACGGAAACCCGCACGATGTCCGCACCGGCATCTTCCAGGCG
GCGGATCTGCGCGACGGTGGCAGCGACGTCGCAGGTCTCGGTGTTGGTCATGCTCTGCACGGCGATCGGCGC
ATCGCCGCCCACCGGGACGTTGCCGACCCAGATTTTCCGAGACTTGCGGCGAATGATCGGAGAAGCGCTATG
AATGCTCATTGTCCTACCTTCAGACGGGCCGTTTCGCCGCGGACGAAGGGGGTCACGTCCACCGGCTGGCCG
TTGTAG

Translation:

MSPQSLLFFMFSSLCQTGCQVLGQSIPGNALLLALVTQGLETYHAIGHLVLPEDQGKARAALVGLLELALEA
TGAGVDQQAYAGNGAAQLFGQGQGGQLGRFAEGADVEVGRTVQFGGDHPQGFQQQHQAFHAHGETDARGRLA
AELADQPVVAATAANGALGAKLVGDPLESRAAVIVQAAHQLLVDFVAQSDSIQAGLETLEVGDRFFVEIVVQ
GRRADQQRLGALHLAVEDSQRIGGHAPLAVFVELLEALLQIGHQGLAIACAGLAGTEGVELQGHRVGHAELL
PQAPGEDDQLGVDVRTGQVEDFHADLVELPVATFLRFLVTEHRPGVPELLHLATTAQAVLQHGAHATGGTFR
THGQGFAVAVEEGVHLLVDHVGTFADAAGEEFGELEDGQADLAVAVAVQQAGEGAFQIAPGRSLLRQDVVHA
TNGLQGLAHVGSLNGSAAGDQARIGLGLLGRLLADQPFQLVHQVVVGQFLRRLAVDIHQVRSAAGEADMGLL
GFARTVDDATDHGHVHRHQQVLQAPFQLVHGLHHVEVLPRTARAGDEVDATGAQVQGLEDVETDLDLLDRIG
SQGNPDGVADSLGQEHAQPHRRLHRAGAQAAGLGDAQVQGLLDLPGQQAIGGDGHEDVGGLDADLEVLEVQL
VEMIDVAHGRFEQGFRGRFAVFLLQVLFQRTGIDADTDRDVALARGVDHGLDPVLATDVARIDAQAVHSQLG
DAQGDAIVEVDVGDQRHVDLLLDLAERLGGVHVGDGNPHDVRTGIFQAADLRDGGSDVAGLGVGHALHGDRR
IAAHRDVADPDFPRLAANDRRSAMNAHCPTFRRAVSPRTKGVTSTGWPL*

AnnotationID:6471 GeneID:6470

AnnotatorUID: diggins

Modification Date/Time: 2005-04-24 10:10:36

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12745

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:30045