ViewGene

Locus Name:
GeneID:
Location:

GeneID:6469
TrivialName: PA14_14920
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_14920
PAO1 Ortholog Locus:
Sequence Length:1740
Protein Length:579
Start: 1268984
Stop: 1267245
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCCCGCTTCAGGTCAGAGGGGAATATGCGCCAGGCGATGGCGCAGGACGAATAACCGCCTCGCGATCATT
CGTCGCCACGACAGGGAATCGGCGGTCAACACCGGCGGCCTGGCTCTACAGCCGCGGCCAATGAAAAAGGCC
CGACAGGGACACCCGCCGGGCCTTTCGACGAAGGAAACGCCACACTCAGCGGCGCTTGTCCTTCTTCTTCTT
CTCGGCTTTCTTGTGGTGCGACATCAGCCGGCGCTTCTTGTTGACCTGGCGCGCGGTCAGCGAATTCTTCTT
GCCCTCGTAGGGGTTCTCGCCGCCCTTGTACTCGATGCGGATCGGCGTACCGACCAACTTCAATACCCGCCG
GTAGGTCTTCTCCAGGTAGCGGGTATAGGCCTTCGGCACCGCGTCCACCTGGTTGCCGTGGATCACGATCAG
CGGCGGGTTGGCGCCGCCCAGGTGGGCGTAGCGCAGCTTGATCCGGCGACCGTTGACCATCGGCGGCTGGTG
CACCTGCACGGCGTCCTCGAGGATGCTGGTCAGGCGGCTGGTCGGCCAGCGGGTCACCGCCGAACGGAAGGA
CTCCTGGACCGACTTGTAGAGATGGCCGACGCCGGTGCCATGCAGGGCCGAAATGAAATGGATGTCGGCGAA
GTCGACGAACAGCAGGCGCCGCTCCAGTTCGGTCTTCACGTAGTCACGCTCGGCCGCCTCCATGCCATCCCA
CTTGTTCAGGGCGATGACCAGGGCACGGCCGGTCTCGAGGACGAAGCCGAGCAGGTTGAGGTCGTGCTCGAC
CACCCCTTCGCGGGCGTCCATGACGAAGATCACCACGTTGGCGTCCTGGATCGCCTGGAGGGTCTTCACCAC
CGAGAACTTTTCCACCGCCTCGAAGATCTTGCCGCGACGCCGCACGCCAGCGGTGTCGATCAGGGTGTACAT
CTCCTCGTTGCGCTCGAACGGGATGTAGATGCTGTCGCGGGTGGTGCCGGCCTGGTCGTAGACGATCACCCG
CTCTTCGCCGAGCATGCGGTTGACCAGGGTCGACTTGCCCACGTTGGGCCGGCCGATGATGGCGATCTTGAT
CCCGTCCTTCTCGCTGGGACCGGGAATCCGGGTCGGTTCCTCGCCTTCGGCGACCTCTTCGCTCGCCGGCTC
GCCCTCGCCTTCTTCCTCCGCGTTGTCCTTGGGGAAGATCCCCAGGGCTTCCTGCAGCATATGGTTGATGCC
GCGACCGTGGGCGGCGGCGATCGGCAGCGCATCGCCCAGGCCCAGCGGGCTGAACTCGGCACGAGCGAGATC
GGGATCGATGGTGTCGACCTTGTTGGCGATCAGGAAGCTGCGCTTGTTCCGCTTGCGCAGGTGCTCCGCGAT
CATCTGGTCGGCGGCGGTCATGCCGGCGCGCGAATCGACCAGGAACAGGACGGCATCCGCCTCCTCGATGGC
CTGCAACGATTGCTCGGCCATTTTCGCATCGATGCCTTCCTCATCGCCGGAGATGCCTCCGGTATCGATGAC
GATATAGGTGCGGCCCTGCCAGCGCGCCTCGCCGTACTGGCGATCGCGGGTCAGGCCTGCGTACTCCGCCAC
GATGGCGTCGCGCGACTTGGTCAGGCGGTTGAACAGAGTGGACTTGCCGACGTTCGGGCGACCCACCAGGGC
AATAACGGGAACCATGCGGCTCTCCACGAGAATTCAGAAAACACAAAGGCCGCTGACGTCGGACGGCAGCGG
CCGGACACTTGA
Translation:
MPASGQRGICARRWRRTNNRLAIIRRHDRESAVNTGGLALQPRPMKKARQGHPPGLSTKETPHSAALVLLLL
LGFLVVRHQPALLVDLARGQRILLALVGVLAALVLDADRRTDQLQYPPVGLLQVAGIGLRHRVHLVAVDHDQ
RRVGAAQVGVAQLDPATVDHRRLVHLHGVLEDAGQAAGRPAGHRRTEGLLDRLVEMADAGAMQGRNEMDVGE
VDEQQAPLQFGLHVVTLGRLHAIPLVQGDDQGTAGLEDEAEQVEVVLDHPFAGVHDEDHHVGVLDRLEGLHH
RELFHRLEDLAATPHASGVDQGVHLLVALERDVDAVAGGAGLVVDDHPLFAEHAVDQGRLAHVGPADDGDLD
PVLLAGTGNPGRFLAFGDLFARRLALAFFLRVVLGEDPQGFLQHMVDAATVGGGDRQRIAQAQRAELGTSEI
GIDGVDLVGDQEAALVPLAQVLRDHLVGGGHAGARIDQEQDGIRLLDGLQRLLGHFRIDAFLIAGDASGIDD
DIGAALPARLAVLAIAGQACVLRHDGVARLGQAVEQSGLADVRATHQGNNGNHAALHENSENTKAADVGRQR
PDT*
AnnotationID:6470GeneID:6469
AnnotatorUID: diggins
Modification Date/Time: 2005-04-24 10:10:23
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16235
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30043
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49471How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3684954Stop: 3686693
Length: 1740
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCCCGCTTCAGGTCAGAGGGGAATATGCGCCAGGCGATGGCGCAGGACGAATAACCGCCTCGCGATCATT
CGTCGCCACGACAGGGAATCGGCGGTCAACACCGGCGGCCTGGCTCTACAGCCGCGGCCAATGAAAAAGGCC
CGACAGGGACACCCGCCGGGCCTTTCGACGAAGGAAACGCCACACTCAGCGGCGCTTGTCCTTCTTCTTCTT
CTCGGCTTTCTTGTGGTGCGACATCAGCCGGCGCTTCTTGTTGACCTGGCGCGCGGTCAGCGAATTCTTCTT
GCCCTCGTAGGGGTTCTCGCCGCCCTTGTACTCGATGCGGATCGGCGTACCGACCAACTTCAATACCCGCCG
GTAGGTCTTCTCCAGGTAGCGGGTATAGGCCTTCGGCACCGCGTCCACCTGGTTGCCGTGGATCACGATCAG
CGGCGGGTTGGCGCCGCCCAGGTGGGCGTAGCGCAGCTTGATCCGGCGACCGTTGACCATCGGCGGCTGGTG
CACCTGCACGGCGTCCTCGAGGATGCTGGTCAGGCGGCTGGTCGGCCAGCGGGTCACCGCCGAACGGAAGGA
CTCCTGGACCGACTTGTAGAGATGGCCGACGCCGGTGCCATGCAGGGCCGAAATGAAATGGATGTCGGCGAA
GTCGACGAACAGCAGGCGCCGCTCCAGTTCGGTCTTCACGTAGTCACGCTCGGCCGCCTCCATGCCATCCCA
CTTGTTCAGGGCGATGACCAGGGCACGGCCGGTCTCGAGGACGAAGCCGAGCAGGTTGAGGTCGTGCTCGAC
CACCCCTTCGCGGGCGTCCATGACGAAGATCACCACGTTGGCGTCCTGGATCGCCTGGAGGGTCTTCACCAC
CGAGAACTTTTCCACCGCCTCGAAGATCTTGCCGCGACGCCGCACGCCAGCGGTGTCGATCAGGGTGTACAT
CTCCTCGTTGCGCTCGAACGGGATGTAGATGCTGTCGCGGGTGGTGCCGGCCTGGTCGTAGACGATCACCCG
CTCTTCGCCGAGCATGCGGTTGACCAGGGTCGACTTGCCCACGTTGGGCCGGCCGATGATGGCGATCTTGAT
CCCGTCCTTCTCGCTGGGACCGGGAATCCGGGTCGGTTCCTCGCCTTCGGCGACCTCTTCGCTCGCCGGCTC
GCCCTCGCCTTCTTCCTCCGCGTTGTCCTTGGGGAAGATCCCCAGGGCTTCCTGCAGCATATGGTTGATGCC
GCGACCGTGGGCGGCGGCGATCGGCAGCGCATCGCCCAGGCCCAGCGGGCTGAACTCGGCACGAGCGAGATC
GGGATCGATGGTGTCGACCTTGTTGGCGATCAGGAAGCTGCGCTTGTTCCGCTTGCGCAGGTGCTCCGCGAT
CATCTGGTCGGCGGCGGTCATGCCGGCGCGCGAATCGACCAGGAACAGGACGGCATCCGCCTCCTCGATGGC
CTGCAACGATTGCTCGGCCATTTTCGCATCGATGCCTTCCTCATCGCCGGAGATGCCTCCGGTATCGATGAC
GATATAGGTGCGGCCCTGCCAGCGCGCCTCGCCGTACTGGCGATCGCGGGTCAGGCCTGCGTACTCCGCCAC
GATGGCGTCGCGCGACTTGGTCAGGCGGTTGAACAGAGTGGACTTGCCGACGTTCGGGCGACCCACCAGGGC
AATAACGGGAACCATGCGGCTCTCCACGAGAATTCAGAAAACACAAAGGCCGCTGACGTCGGACGGCAGCGG
CCGGACACTTGA