ViewGene

Locus Name:
GeneID:
Location:

GeneID:6464
TrivialName: PA14_15060
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15060
PAO1 Ortholog Locus:
Sequence Length:2352
Protein Length:783
Start: 1278844
Stop: 1276493
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22771.1| (AE005754) hypothetical protein [Caulobacter crescentus CB15]
Identities = 173/685 (25%), Positives = 241/685 (35%), Gaps = 152/685 (22%)
Sequence:
ATGGATCACCTCATCGGAGCGCACGTAGGCAAGGCGGGCCCCGCTGGACGGGGCCTCGTTGAAGGTTCAGAA
GCTGAAGTCGACCTTGGTCCAGAAGGTCCGGCCCGGCTCTGGAACCGTTTCGTTGGCGGAGAAACCGAAGCC
GGCGTCGCCGGCCTTGTTCAGGTGCTCGGTGTAATCCTTGTCGAACAGGTTATCGACACCGGCGCTCAGCTT
GACGTTGCGAGTCACCCGGTAGGCGCCGTTGAGCGAGAAGACGCCGAAGCCGGCGCTCTTGTCGAAGTCCTT
GCCGACCACGTTGCCCTGGTCCCTGGCGATACGATTCTGCGGCGCGACCACCCGCCACAGGCTGCCGGCACT
CCAGTCGCCTTCCTCGTAGGTCAGGCCGAAGCGCGCTTCCAGCGGCGGGATCTGCGGCAGCGCGCGGTCGTC
CGAGCTGTTCTTGCCCCAGGCATAGGCCAGGCTGGCGTCGGTCTTCCAGTTGCCGGTGAGCTGGTAGGAAGC
GCCCAGCTCGCCGCCCATGATCCGCGCGTCGACGTTGGTCGCCTGGGTCGAGGAGCCCATCATGCCCTCGCG
ATAGCTGAACAGGATGAAGTCCTGGACCACCCCGACGTAGCCGGAGGCCCAGGCCTGCAGCTTGTCGCCGTT
GTACTGGAGGCCGAAGTCGAGCTGGGTGGTCTTTTCCGGCTTGATCTTGTCGAAGGCGTTGACCGACCCGTT
CGGCCCGCGCTTGGGCGAGAACAGCTCCCAGTAGTCGGGGAAGCGCTCGGCATGGCCAAGGCCGGCGTAGAG
GGTGGTCGGCGAGTCGGCAAGGTCATGCTCGTAGCGCACGAAGCCGCTGGGCAAGGTATCGGCGCGGGTGTC
GTTGGCCGTCGGGTTGGCCATGGCGTGGCCCATGTGCCCGGACTTCAGGGTCTGCCGGTAGTCCTTGACCGA
GGCGCGGTCCAGGCGCAACCCGCCGATCAGCCGGTCGCGCTCGGCGGCGAACCAGGTCAGTTCGCCGAAGGC
CCCGTAGTTGTGGAACACCGCGTCCTTGCTCCAGGGGAACTGGTCGGCGTCGGTGTAGTAGTCGGTCATCAT
GTCGTACTTGGAGCCGCGCGCGCGGTGCTCGTTGCGCATGGCGTCGACCCCGGTGACCAGCTTGAAGTCGTC
CCAGCGCCAGGTGGCCGCCAGGCGACCGCCGAGGGTGCGTCGGTCCACCTGGGACGCCATCGGCATGGGCAT
CATGCTGGACGGGTCGGGAGTGCGCAGGCGGAAGTTGTCCATGATGTGGTCGGCGTAGTTGTAGTAGACCTG
CGCCTCGACCTTCTCCAGCACATCGCTGACGTTCGATTTGACGAAGCGCAGGCCCAGGCTCTCGCGCTTGAA
CTGCGAGCCGTCCATGCCGCGCCCGGCGTAACGTGCCTCGCCGTCGCCCTTGCCGGCGGTGAGTTCGATCAG
GGTGTCCTCGTCGGGGGTCCAGCCGACCGCGACGTCGCCGTTCCACTTCTTCCAGCGCGACGGCACGGTATT
CCCGGCGCCGTCCTCGTAATCGTCGGACTGCGCGTGGTTGCCGGTGAAGCGCAGGTAGCCGAGCCGGTTGCC
GGCGGCGGCGTCCAGCACCTTGTCGAAGCGGCCATTGGAGCCGGCCAGCAGGCTGGCGTTGACCCGCGAGCC
GAGTTCGCCGAAGCGCTCCGGCTCACGCTCGAAGAGGATCGTCCCGGCCGACGCGCCCGGCCCCCAGAGCAC
CGTCTGCGGGCCCTTGATCACGGTGAGCTTGTCGTAGGTTTCCGGCGAGATGTAGGAGGTCGGCGCGTCCAT
CCGGTTCGGACAGGCACCGAGCATCATGCCGCCGTTGGTGAGGATGTTCAGGCGCGAACCGAACATCCCGCG
CAGCACCGGGTCGCCGTTGCTGCCGCCGTTGCGGATCACCGCGAAGCCGGGAATGGTCTTCAGGTAGTCGGC
CCCATCGCTGGCCGGTACCGGTTGGCGCGGCTCCTTGGGATTGGTGACGATGGTCAGCGGCGAACTCTGGGC
GACTCCGGTGACCACGCTCGGCGCCAGCTCCACGGCGTGATCCTGGTGCTGGGAGTGCTCCTCGGCCAGGAG
CGCCGACGGAGACAGGGCCAGGCCGCACAGTGCGGCGAAGGCTCCCGCCCAGCGGCGGCGTTGTGCGAGACG
GGCAGGGTCGAAGCTGAAAGCGGCGGTCGGGCAGGCGTTGCCGGCCGCTCGTTGTTGAGTAGACATACGTTT
TTCCATGATCTATGTGACTTCCGCCCCGCCCCCACGGCGAGCAGGCACCCGGCCAGGCTCGCGTCACCGGCG
CGGCGAAGACGCGCCGGTGCCCCCAGGAAGCGGCGGCTATCGGATTGA
Translation:
MDHLIGAHVGKAGPAGRGLVEGSEAEVDLGPEGPARLWNRFVGGETEAGVAGLVQVLGVILVEQVIDTGAQL
DVASHPVGAVEREDAEAGALVEVLADHVALVPGDTILRRDHPPQAAGTPVAFLVGQAEARFQRRDLRQRAVV
RAVLAPGIGQAGVGLPVAGELVGSAQLAAHDPRVDVGRLGRGAHHALAIAEQDEVLDHPDVAGGPGLQLVAV
VLEAEVELGGLFRLDLVEGVDRPVRPALGREQLPVVGEALGMAKAGVEGGRRVGKVMLVAHEAAGQGIGAGV
VGRRVGHGVAHVPGLQGLPVVLDRGAVQAQPADQPVALGGEPGQFAEGPVVVEHRVLAPGELVGVGVVVGHH
VVLGAARAVLVAHGVDPGDQLEVVPAPGGRQATAEGASVHLGRHRHGHHAGRVGSAQAEVVHDVVGVVVVDL
RLDLLQHIADVRFDEAQAQALALELRAVHAAPGVTCLAVALAGGEFDQGVLVGGPADRDVAVPLLPARRHGI
PGAVLVIVGLRVVAGEAQVAEPVAGGGVQHLVEAAIGAGQQAGVDPRAEFAEALRLTLEEDRPGRRARPPEH
RLRALDHGELVVGFRRDVGGRRVHPVRTGTEHHAAVGEDVQARTEHPAQHRVAVAAAVADHREAGNGLQVVG
PIAGRYRLARLLGIGDDGQRRTLGDSGDHARRQLHGVILVLGVLLGQERRRRQGQAAQCGEGSRPAAALCET
GRVEAESGGRAGVAGRSLLSRHTFFHDLCDFRPAPTASRHPARLASPARRRRAGAPRKRRLSD*
AnnotationID:6465GeneID:6464
AnnotatorUID: diggins
Modification Date/Time: 2005-04-24 10:10:07
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12736
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:30033
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49466How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3675093Stop: 3677444
Length: 2352
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGATCACCTCATCGGAGCGCACGTAGGCAAGGCGGGCCCCGCTGGACGGGGCCTCGTTGAAGGTTCAGAA
GCTGAAGTCGACCTTGGTCCAGAAGGTCCGGCCCGGCTCTGGAACCGTTTCGTTGGCGGAGAAACCGAAGCC
GGCGTCGCCGGCCTTGTTCAGGTGCTCGGTGTAATCCTTGTCGAACAGGTTATCGACACCGGCGCTCAGCTT
GACGTTGCGAGTCACCCGGTAGGCGCCGTTGAGCGAGAAGACGCCGAAGCCGGCGCTCTTGTCGAAGTCCTT
GCCGACCACGTTGCCCTGGTCCCTGGCGATACGATTCTGCGGCGCGACCACCCGCCACAGGCTGCCGGCACT
CCAGTCGCCTTCCTCGTAGGTCAGGCCGAAGCGCGCTTCCAGCGGCGGGATCTGCGGCAGCGCGCGGTCGTC
CGAGCTGTTCTTGCCCCAGGCATAGGCCAGGCTGGCGTCGGTCTTCCAGTTGCCGGTGAGCTGGTAGGAAGC
GCCCAGCTCGCCGCCCATGATCCGCGCGTCGACGTTGGTCGCCTGGGTCGAGGAGCCCATCATGCCCTCGCG
ATAGCTGAACAGGATGAAGTCCTGGACCACCCCGACGTAGCCGGAGGCCCAGGCCTGCAGCTTGTCGCCGTT
GTACTGGAGGCCGAAGTCGAGCTGGGTGGTCTTTTCCGGCTTGATCTTGTCGAAGGCGTTGACCGACCCGTT
CGGCCCGCGCTTGGGCGAGAACAGCTCCCAGTAGTCGGGGAAGCGCTCGGCATGGCCAAGGCCGGCGTAGAG
GGTGGTCGGCGAGTCGGCAAGGTCATGCTCGTAGCGCACGAAGCCGCTGGGCAAGGTATCGGCGCGGGTGTC
GTTGGCCGTCGGGTTGGCCATGGCGTGGCCCATGTGCCCGGACTTCAGGGTCTGCCGGTAGTCCTTGACCGA
GGCGCGGTCCAGGCGCAACCCGCCGATCAGCCGGTCGCGCTCGGCGGCGAACCAGGTCAGTTCGCCGAAGGC
CCCGTAGTTGTGGAACACCGCGTCCTTGCTCCAGGGGAACTGGTCGGCGTCGGTGTAGTAGTCGGTCATCAT
GTCGTACTTGGAGCCGCGCGCGCGGTGCTCGTTGCGCATGGCGTCGACCCCGGTGACCAGCTTGAAGTCGTC
CCAGCGCCAGGTGGCCGCCAGGCGACCGCCGAGGGTGCGTCGGTCCACCTGGGACGCCATCGGCATGGGCAT
CATGCTGGACGGGTCGGGAGTGCGCAGGCGGAAGTTGTCCATGATGTGGTCGGCGTAGTTGTAGTAGACCTG
CGCCTCGACCTTCTCCAGCACATCGCTGACGTTCGATTTGACGAAGCGCAGGCCCAGGCTCTCGCGCTTGAA
CTGCGAGCCGTCCATGCCGCGCCCGGCGTAACGTGCCTCGCCGTCGCCCTTGCCGGCGGTGAGTTCGATCAG
GGTGTCCTCGTCGGGGGTCCAGCCGACCGCGACGTCGCCGTTCCACTTCTTCCAGCGCGACGGCACGGTATT
CCCGGCGCCGTCCTCGTAATCGTCGGACTGCGCGTGGTTGCCGGTGAAGCGCAGGTAGCCGAGCCGGTTGCC
GGCGGCGGCGTCCAGCACCTTGTCGAAGCGGCCATTGGAGCCGGCCAGCAGGCTGGCGTTGACCCGCGAGCC
GAGTTCGCCGAAGCGCTCCGGCTCACGCTCGAAGAGGATCGTCCCGGCCGACGCGCCCGGCCCCCAGAGCAC
CGTCTGCGGGCCCTTGATCACGGTGAGCTTGTCGTAGGTTTCCGGCGAGATGTAGGAGGTCGGCGCGTCCAT
CCGGTTCGGACAGGCACCGAGCATCATGCCGCCGTTGGTGAGGATGTTCAGGCGCGAACCGAACATCCCGCG
CAGCACCGGGTCGCCGTTGCTGCCGCCGTTGCGGATCACCGCGAAGCCGGGAATGGTCTTCAGGTAGTCGGC
CCCATCGCTGGCCGGTACCGGTTGGCGCGGCTCCTTGGGATTGGTGACGATGGTCAGCGGCGAACTCTGGGC
GACTCCGGTGACCACGCTCGGCGCCAGCTCCACGGCGTGATCCTGGTGCTGGGAGTGCTCCTCGGCCAGGAG
CGCCGACGGAGACAGGGCCAGGCCGCACAGTGCGGCGAAGGCTCCCGCCCAGCGGCGGCGTTGTGCGAGACG
GGCAGGGTCGAAGCTGAAAGCGGCGGTCGGGCAGGCGTTGCCGGCCGCTCGTTGTTGAGTAGACATACGTTT
TTCCATGATCTATGTGACTTCCGCCCCGCCCCCACGGCGAGCAGGCACCCGGCCAGGCTCGCGTCACCGGCG
CGGCGAAGACGCGCCGGTGCCCCCAGGAAGCGGCGGCTATCGGATTGA