ViewGene
Locus Name:
GeneID:
Location:

GeneID:6442
TrivialName: PA14_15550
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15550
PAO1 Ortholog Locus:
Sequence Length:474
Protein Length:157
Start: 1315382
Stop: 1314909
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGGGCCTTCTCGAAGGCGGCTTTGACGGCCGAAGCCCCGCCGGCGAGGTTGGCCGCGCCACTCATCACGGC
AGCGCCGGCCATGCTTGCAGCGCCGGCCGCAACACTGGCAGCCCCCATCGCGGCACCAACAGCAGCGCCCGC
ACCGAAGTTGCCGATGCCACCGGCGTTCCCAACGCCCGTACCGGAAATCACGCCGGCGACCAGCGGCGGCAC
GCGATTGACCAGCAGCAGCAACGCCAGGCAGAACACCAGCATCACGCCCAGCTCCTCGAAGTTCAGTGTGCC
CTTGCTCATCTTGGCGTAGAAGCTGGACAGCAGATCATTCCCGATGCCAACAAGCAGCACCATCGTCATGAT
CTGCACGGCGACGCCCAGCACGGTCTTGTAGTAGTTGATCGCCATGTCGGAAGTCCAACGCGATCCGCCGAA
GCCGAGGAAGAAGATGCCGGCATAGGACAGCAGCCAGGCTGA
Translation:
MGLLEGGFDGRSPAGEVGRATHHGSAGHACSAGRNTGSPHRGTNSSARTEVADATGVPNARTGNHAGDQRRH
AIDQQQQRQAEHQHHAQLLEVQCALAHLGVEAGQQIIPDANKQHHRHDLHGDAQHGLVVVDRHVGSPTRSAE
AEEEDAGIGQQPG*
AnnotationID:6443GeneID:6442
AnnotatorUID: danlee
Modification Date/Time: 2005-10-18 14:02:24
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:16220




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29989




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49444How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3638555Stop: 3639028

          
Length: 474


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGGGCCTTCTCGAAGGCGGCTTTGACGGCCGAAGCCCCGCCGGCGAGGTTGGCCGCGCCACTCATCACGGC 
AGCGCCGGCCATGCTTGCAGCGCCGGCCGCAACACTGGCAGCCCCCATCGCGGCACCAACAGCAGCGCCCGC 
ACCGAAGTTGCCGATGCCACCGGCGTTCCCAACGCCCGTACCGGAAATCACGCCGGCGACCAGCGGCGGCAC 
GCGATTGACCAGCAGCAGCAACGCCAGGCAGAACACCAGCATCACGCCCAGCTCCTCGAAGTTCAGTGTGCC 
CTTGCTCATCTTGGCGTAGAAGCTGGACAGCAGATCATTCCCGATGCCAACAAGCAGCACCATCGTCATGAT 
CTGCACGGCGACGCCCAGCACGGTCTTGTAGTAGTTGATCGCCATGTCGGAAGTCCAACGCGATCCGCCGAA 
GCCGAGGAAGAAGATGCCGGCATAGGACAGCAGCCAGGCTGA