ViewGene
Locus Name:
GeneID:
Location:

GeneID:6433
TrivialName: PA14_15640
AnnotatorUID: danlee
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15640
PAO1 Ortholog Locus:
Sequence Length:267
Protein Length:88
Start: 1329286
Stop: 1329020
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGAGAATCGCCGTTACTCCAACGTTTCTGCTGCCGAGCTTCGCGATCATCCAGCCGGATACCGGCAACGAA
AGCACCACCCCGGCCGACATGGCGAAAAGCGCACTGCCGAACACCCCGTCGGAAAGCTGGAGTCCGTCTTTT
ATCGTGGCCATCCGGGAGCTGAGGCTCCCGAAACACAGTCCGAGCATGAAGAACATGCCGGAGATGGCAATA
CCTTTCCCTACGCTGCTGGAGGTCATTCGATCGATCCCGGTGCTTGTTTGA
Translation:
MRIAVTPTFLLPSFAIIQPDTGNESTTPADMAKSALPNTPSESWSPSFIVAIRELRLPKHSPSMKNMPEMAI
PFPTLLEVIRSIPVLV*
AnnotationID:6434GeneID:6433
AnnotatorUID: danlee
Modification Date/Time: 2005-10-18 15:03:51
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:






   
Genomic Context:






   
Comment:


















    ReferenceID:16219




  
Author/Investigator(s):
        





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:
Closest functional homolog






    
Reference Type:BLASTP (text/plain)







    
Data:ref6433.cgi


    		




 
URL:

















    ReferenceID:16939




  
Author/Investigator(s):
        





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:
BlastP






    
Reference Type:Blast (text/plain)







    
Data:BlastP6433.cgi


    		




 
URL:

















    ReferenceID:29971




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49435How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3624651Stop: 3624917

          
Length: 267


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGAGAATCGCCGTTACTCCAACGTTTCTGCTGCCGAGCTTCGCGATCATCCAGCCGGATACCGGCAACGAA 
AGCACCACCCCGGCCGACATGGCGAAAAGCGCACTGCCGAACACCCCGTCGGAAAGCTGGAGTCCGTCTTTT 
ATCGTGGCCATCCGGGAGCTGAGGCTCCCGAAACACAGTCCGAGCATGAAGAACATGCCGGAGATGGCAATA 
CCTTTCCCTACGCTGCTGGAGGTCATTCGATCGATCCCGGTGCTTGTTTGA