ViewGene
Locus Name:
GeneID:
Location:

GeneID:6428
TrivialName: PA14_15800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_15800
PAO1 Ortholog Locus:
Sequence Length:1152
Protein Length:383
Start: 1347708
Stop: 1348859
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGGCGCGCGCTCAGGCTCAGTGGGTTCGGGTGACTTTGCTCAGGTGCCGTGGCTGGTCCGGGTCCATGCC
GCGGGCTTCGGCCAGGCCGGCGGCCATGACGTAGAAACTCTGGATCGCCAGGATCGGATCGAGCGCCGGATG
CGCGGCGCGCTGCAGCGGCAGGTCGCGTTCGGCGATGTCGTCCGGGGCGGCGAGCAATACCTGCGCACCGCG
CTGGCGCATATCCTCGGCGATCGCCAGCAGGCCTTCCTGCTCCGGGCCGCGGGGAGCGAACACCAGCAGCGG
ATAGCGCTCCTCGACCAGCGCCATCGGTCCATGGCGGACCTCGGCGCTGCTGAAGGCCTCGGCCTGGATCGC
CGAGGTTTCCTTGAATTTCAGCGCGGCCTCCTGGGCGATGGCGTAGCCGGCGCCGCGACCGATCACCATCAG
CCGCTGGCAGTCGCGCAGGGCCTCGATGGCCGGCGACCAGTCGAGCCTGGCGGCCTGCTCCAGCCCGGCCGC
CAGGCCCTGGCCTGCGGCCAGCAGGGCATTGTCGCGCTGCCAGTGGGCGAGCAGGCGGGCGCTGGCGCTGAG
CGTGGCGATGAAGCTCTTGGTCGCTGCGACGCTGCGCTCGGCGCCGGCGCAGAGCGGCACGACGAATTCGCT
GGCGGCTTCCAGCGGCGAATCCTCGGCATTCACCAGGGCGATGCCCAGGGCGCCGCGTTCGCGCAGGATGCG
CAGGCTGTCCACGAGATCGGGGCTCTGCCCGGACTGCGAGAAAGCGAAGACGGCCTGCCCGGCGACACGCAG
TGGCGAGCGGTTCAGGGTCACTACCGACATGGGCAGCGAGGCCACCGGCAAGCCGGCGTGCTGCATGGCCAG
GTAGGCGAAGTAGCTGGCGGCATGGTCGGAGCTGCCGCGCGCGACAGTCAGTGCCAGGTTCGGATCGACCTC
CCGCAGACGCTGGCCAAGCGCCGGCAGGCAGGCGTCGAGCACGGCCAGTTGACGGCTCGCCACCGCGGCGGC
GGAGAGCGCTTCCTCGAGCATCAGCGAAGTCATTCGAGTTCTCCTTCCACCATCACGGCGTCGAGTTCCAGG
GAGCGATCCAGGCGCACCACATCGGCCCAGGCTGCGGGCGCCAGGCGGCCGCGCTCGGCGAGGCCGAGGTAA
Translation:
MGARSGSVGSGDFAQVPWLVRVHAAGFGQAGGHDVETLDRQDRIERRMRGALQRQVAFGDVVRGGEQYLRTA
LAHILGDRQQAFLLRAAGSEHQQRIALLDQRHRSMADLGAAEGLGLDRRGFLEFQRGLLGDGVAGAATDHHQ
PLAVAQGLDGRRPVEPGGLLQPGRQALACGQQGIVALPVGEQAGAGAERGDEALGRCDAALGAGAERHDEFA
GGFQRRILGIHQGDAQGAAFAQDAQAVHEIGALPGLRESEDGLPGDTQWRAVQGHYRHGQRGHRQAGVLHGQ
VGEVAGGMVGAAARDSQCQVRIDLPQTLAKRRQAGVEHGQLTARHRGGGERFLEHQRSHSSSPSTITASSSR
ERSRRTTSAQAAGARRPRSARPR*
AnnotationID:6429GeneID:6428
AnnotatorUID: diggins
Modification Date/Time: 2005-04-22 11:11:07
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:12667




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29961




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49430How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3606229Stop: 3605078

          
Length: 1152


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TAATruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
ATGGGCGCGCGCTCAGGCTCAGTGGGTTCGGGTGACTTTGCTCAGGTGCCGTGGCTGGTCCGGGTCCATGCC 
GCGGGCTTCGGCCAGGCCGGCGGCCATGACGTAGAAACTCTGGATCGCCAGGATCGGATCGAGCGCCGGATG 
CGCGGCGCGCTGCAGCGGCAGGTCGCGTTCGGCGATGTCGTCCGGGGCGGCGAGCAATACCTGCGCACCGCG 
CTGGCGCATATCCTCGGCGATCGCCAGCAGGCCTTCCTGCTCCGGGCCGCGGGGAGCGAACACCAGCAGCGG 
ATAGCGCTCCTCGACCAGCGCCATCGGTCCATGGCGGACCTCGGCGCTGCTGAAGGCCTCGGCCTGGATCGC 
CGAGGTTTCCTTGAATTTCAGCGCGGCCTCCTGGGCGATGGCGTAGCCGGCGCCGCGACCGATCACCATCAG 
CCGCTGGCAGTCGCGCAGGGCCTCGATGGCCGGCGACCAGTCGAGCCTGGCGGCCTGCTCCAGCCCGGCCGC 
CAGGCCCTGGCCTGCGGCCAGCAGGGCATTGTCGCGCTGCCAGTGGGCGAGCAGGCGGGCGCTGGCGCTGAG 
CGTGGCGATGAAGCTCTTGGTCGCTGCGACGCTGCGCTCGGCGCCGGCGCAGAGCGGCACGACGAATTCGCT 
GGCGGCTTCCAGCGGCGAATCCTCGGCATTCACCAGGGCGATGCCCAGGGCGCCGCGTTCGCGCAGGATGCG 
CAGGCTGTCCACGAGATCGGGGCTCTGCCCGGACTGCGAGAAAGCGAAGACGGCCTGCCCGGCGACACGCAG 
TGGCGAGCGGTTCAGGGTCACTACCGACATGGGCAGCGAGGCCACCGGCAAGCCGGCGTGCTGCATGGCCAG 
GTAGGCGAAGTAGCTGGCGGCATGGTCGGAGCTGCCGCGCGCGACAGTCAGTGCCAGGTTCGGATCGACCTC 
CCGCAGACGCTGGCCAAGCGCCGGCAGGCAGGCGTCGAGCACGGCCAGTTGACGGCTCGCCACCGCGGCGGC 
GGAGAGCGCTTCCTCGAGCATCAGCGAAGTCATTCGAGTTCTCCTTCCACCATCACGGCGTCGAGTTCCAGG 
GAGCGATCCAGGCGCACCACATCGGCCCAGGCTGCGGGCGCCAGGCGGCCGCGCTCGGCGAGGCCGAGGTAA