ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6424

TrivialName: PA14_16080

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_16080

PAO1 Ortholog Locus:

Sequence Length: 1488

Protein Length: 495

Start: 1371280

Stop: 1369793

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE42528.1| (BX640417) putative outer protein D [Bordetella pertussis] Identities = 62/254 (24%), Positives = 98/254 (38%), Gaps = 23/254 (9%)

Sequence:

TTGAGAAGACATGAAAAAGCCCGCCATCAAGGCGGGCTTTTTCCTTTCACGACAGGCTCAGAGCGGCTTGCC
GCGATTGCCGTGCTGGCTGACGAAAGCCTGTACCTTGGCCAGCTCGTTCGGCAATACGGTGCAGCGCTCCTC
GCGCTCGAACAGGTCGGCGAGGTGCGCAGGCAGCGCCGGCGCCTGGCCGATGCCGGCCTTCTCCACCGCTTC
GGGGAACTTGACCGGATGCGCAGTGCCCAGGGTCACCATCGGCACGCTCAGGCTGCGCCGGCATTCGCGTGC
GGCACGCACGCCAATGGCGGTGTGCGGGTCGAGCAACTCGCCACAGGAGCGGTATACCTCGGCGATGGTcTC
GCAggtCTGCTCGTcGCTGACCGCCAGGGAGTCGAACAGCTTGCGCGCCTCGGTCCAGCGCTGGTCTTCCAC
CGACAGCTTGCCGCTGGCCTTGAAGGCATCCAGCAGTTCGGCGACGGCCTTGCCGTTGCGGCCGTGCAGGTC
GAACAGCAGGCGTTCGAAGTTGGACGAGACCATGATATCCATCGACGGCGACAGCGAGGGATGCAGGGTGTC
CTTGTCGTAGCGGTTGCCGCTCATGAAGCGGTGCAGGATGTCGTTGCGGTTGGTCGCGACGATCAGCTGGCT
GACCGGCAGGCCCATGTTGCGCGCCAGGTAGCCGGCGAAGATGTCGCCGAAGTTGCCGGTCGGCACCGAGAA
CGCCACCGAGCGATGCGGCGCGCCGAGCTGCAGCGCGGCATGGAAGTAGTAGACGATCTGGGCCATGATCCG
CGCCCAGTTGATCGAGTTCACCGCTACCAGGCGGGTACCCTTGAGGAAGCCCTGGTCGGCGAAGCTGGCCTT
GACCATCTCCTGGCAGTCATCGAAGTTGCCTTCGATGGCGATGTTGTGGATGTTGTCGCCGAGGATGGTGGT
CATCTGCCGGCGCTGCACCTCGGACACGCGGTTGTGCGGGTGCATGATGAAGATGTCGACGTTGTCGCAACG
GCGGCAGCCTTCGATGGCCGCGGAGCCGGTATCGCCGGAGGTGGCCCCCATGATCACCACGCGCTCGCCGCG
CTTGGCCAGCACATGGTCGAGCAGGCGGCCGAGCAGTTGCAGGGCGAAGTCCTTGAAGGCCAGGGTCGGGCC
GTGGAACAGCTCCAGCACCCATTCGTTGCCGTTCAACTGGCGCAGCGGCGCCACTGCGTCATGGGCGAAGAC
GCCATAGGTTTCCTCGAGGATCTTCTTGAAGTCGGCATCGGCGATGCTGCCGGCGACGAACGGGCGCATCAC
CCGGAAGGCCAGCTCGTGGTAGGGCAGGCCGACCCAGGAGGCGATCTCCTCGAGGGTGAAGCGTGGCAGGTT
TTCCGGGACGTAGAGGCCGCCGTCGCTGGCCAGGCCGGCGAGGAGGACATCTTCGAAGTTCAGGGCGGGCGC
TTGGCCGCGGGTGCTGATGTAACGCATGTTCAAAACCTTCGCTGTTGA

Translation:

MRRHEKARHQGGLFPFTTGSERLAAIAVLADESLYLGQLVRQYGAALLALEQVGEVRRQRRRLADAGLLHRF
GELDRMRSAQGHHRHAQAAPAFACGTHANGGVRVEQLATGAVYLGDGLAGLLVADRQGVEQLARLGPALVFH
RQLAAGLEGIQQFGDGLAVAAVQVEQQAFEVGRDHDIHRRRQRGMQGVLVVAVAAHEAVQDVVAVGRDDQLA
DRQAHVARQVAGEDVAEVAGRHRERHRAMRRAELQRGMEVVDDLGHDPRPVDRVHRYQAGTLEEALVGEAGL
DHLLAVIEVAFDGDVVDVVAEDGGHLPALHLGHAVVRVHDEDVDVVATAAAFDGRGAGIAGGGPHDHHALAA
LGQHMVEQAAEQLQGEVLEGQGRAVEQLQHPFVAVQLAQRRHCVMGEDAIGFLEDLLEVGIGDAAGDERAHH
PEGQLVVGQADPGGDLLEGEAWQVFRDVEAAVAGQAGEEDIFEVQGGRLAAGADVTHVQNLRC*

AnnotationID:6425 GeneID:6424

AnnotatorUID: diggins

Modification Date/Time: 2005-04-22 08:08:48

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16215

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29953