ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6419

TrivialName: PA14_16240

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_16240

PAO1 Ortholog Locus:

Sequence Length: 1746

Protein Length: 581

Start: 1389071

Stop: 1387326

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE41948.1| (BX640416) autotransporter [Bordetella pertussis] Identities = 96/377 (25%), Positives = 140/377 (37%), Gaps = 59/377 (15%)

Sequence:

TTGAGCGGCCCCGGCCGGCATTCCTTCCTGGAGTGCCGGCCGGGGCCACCGAGCTTACAACGCGCTCGGGCA
GGTCACGCCGACGGTGCTGAACGCCCGGGTGACGTCAGCCGCCGAGTAGTTGCGGTTCTGCGCCGAGCTAAT
CACTCCACAGGCACCGCTGTTGTAGTTGCTGGTGGCGGTCCAGTAGTAGCGGTTGGCGTCGACGAACACCTC
GAAGGCCTTGCGGGTATCCCAGCCCGGCGAGTTGGCCAGCAGGTAGAACGCACGGTTGTACACGCCGCTGGA
GTGGTGCACGTCGATACCGTTGTAGTACTGCGAGGCGTTGTCGATGGATCGCCCGTCGCGGCTGGGCTGGTC
CATGTAGCGCAACGCACCGCTGCCCTTCTTGATGTCGTAGCCAATCAGGAAGTCGTTCTTGCCGCGCATGTA
GAACTCGGCGGCCTCGCCGGCCATGTCGGAGAACGCCTCGTTCATTCCGCCGGATTGCCCGCGGTAGATCAG
CCCGGAGTTCTGCTCGGTGAAGCCGTGGCTGACCTCGTGGGCCGCCACGTCCAGCGACACCAGCGGATAGAA
CATGGTGGCGCCGTCGCCGAAGAGCATCGCCGTGCCGTCCCAGTAGGCGTTCTCCACGCTGCGCCCGTAGTG
CACCTTCATGTACAGCTTGTGGGTCAGCGGGCTGGTGCCGAACCAGTCCCGGTACAGGTTGAACACCACGCC
GCCGAAGAAATGCGCGTCGTTCAGTGGCGAATAAGCGCCGTTGACCTGCTTGTAGGTGTTGGTCGGGCAGGC
GAAGCGGAACGGCGTGGTCTTGCTGTCGTTGGTGCTGCCGTTCATGTCGACGGTGATGACGTTGCCGTCGTC
CATCTCGCAGCGGTCGTTGACGATCAGCGGACCGTAGTCGCTACCGTAGGTGTACTTGCCGATCTTCTGGTT
GCCACCGGGGCCGCCCGCCTCGGCGTGGGCCAGGCCTTCCCACTGATCGAGCACTTCACCGGTCTTGGCGTC
GATGACGAAATGCGGCCGCGACAGTCCCTCGCCGGGAATCAGGTAGGAGACGTTGTAGACCAGTTGGGCGAT
GTTGTTCTCGCCCAGGCGGATCACCAGTTCCACTTTGTCATTCTCGGTCTTGCGGCCCTGGGCCTTCAGGCT
CTTGGCCTGGGCCAGCACCTGCTCGGCGGATACCGCCGCGGTGGTGCTGCCCGGCAGGTCGGCGGCGATGTT
GGCGACGAAATGGCCGCTGCGCCGCGCCGCCACGCTCTTGCCGGGACCCTTGACTTCGGTGATGGCTTCGCC
GACCACCCGTACGCCGTTGTGGAATTGCTCGTAGCGGGTGACCTGCTTGCCGTTGGGCAGGGTCGTGCTGCG
GATCGCTTTCAGTTCGTCGGCACCGCCGGCGCCGACCGCGGCTTGCAAGGTGACCGGGCCGGGCGCGCCCTG
GGCAGCCTTGCTGGGGAGTTTGGACACGTCGATCAGGTCGGCGGCAAAAGCGGCCGGCGAAACACCCATGAT
CGCAACGAACAACAGGTCAAGCGTAGAAACCTTCTTCATCTTGTTCAGTTCTCCTGGTTTTTTCAGGCCGAA
GTACTCGGCCGACGCTTACCGCCGCCTTGTGGGCTGATCGGAACAGCCGTATCAGTCCTTCGGGTAGAAGGA
ACTGCACTCCCCTGGCTCGGTCCCGTTTTCGACGGTGCTTTCGTGTACCAAAAAGAACCCGCGGCCAAACCT
GCCAGAACTGGCAGGTAG

Translation:

MSGPGRHSFLECRPGPPSLQRARAGHADGAERPGDVSRRVVAVLRRANHSTGTAVVVAGGGPVVAVGVDEHL
EGLAGIPARRVGQQVERTVVHAAGVVHVDTVVVLRGVVDGSPVAAGLVHVAQRTAALLDVVANQEVVLAAHV
ELGGLAGHVGERLVHSAGLPAVDQPGVLLGEAVADLVGRHVQRHQRIEHGGAVAEEHRRAVPVGVLHAAPVV
HLHVQLVGQRAGAEPVPVQVEHHAAEEMRVVQWRISAVDLLVGVGRAGEAERRGLAVVGAAVHVDGDDVAVV
HLAAVVDDQRTVVATVGVLADLLVATGAARLGVGQAFPLIEHFTGLGVDDEMRPRQSLAGNQVGDVVDQLGD
VVLAQADHQFHFVILGLAALGLQALGLGQHLLGGYRRGGAARQVGGDVGDEMAAAPRRHALAGTLDFGDGFA
DHPYAVVELLVAGDLLAVGQGRAADRFQFVGTAGADRGLQGDRAGRALGSLAGEFGHVDQVGGKSGRRNTHD
RNEQQVKRRNLLHLVQFSWFFQAEVLGRRLPPPCGLIGTAVSVLRVEGTALPWLGPVFDGAFVYQKEPAAKP
ARTGR*

AnnotationID:6420 GeneID:6419

AnnotatorUID: diggins

Modification Date/Time: 2005-04-22 08:08:58

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits at any threshold.

Genomic Context:

Comment:

ReferenceID:16207

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29943