ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6416

TrivialName: PA14_16420

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_16420

PAO1 Ortholog Locus:

Sequence Length: 1758

Protein Length: 585

Start: 1407297

Stop: 1405540

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA17117.1| (AL021841) PE_PGRS [Mycobacterium tuberculosis H37Rv] Identities = 33/78 (42%), Positives = 35/78 (44%), Gaps = 15/78 (19%)

Sequence:

GTGGAGCGGGACACGGTCACAGCCTCAGACTTTGAAGCGGGATACGCCGTTGCGCAGCCCGTTCGCCACCAG
GTTCAGCTCATCGATGGCGAAGCTGGCCTGGCGCAGCGACTCCACGGTCTGCCCGGTGGCCTCGCCCAGTTG
CACCAGCGCCTGGTTGATCTGCTCGGCACCGGTCGCCTGGGCCTGCATGCCCTCGTTGACCATCTGCACCCG
CGGCGCCAGCGCCTGCACCTGCTGGATGATCTGCGACAGTTGCTCGCCGACCTGGCCGACCTCGGCGATACC
GCGGCGGACCTCCTCGGAGAACTTGTCCATGCCCATCACCCCGGCCGATACCGCCGACTGGATCTCGCGCAC
CATCTGCTCGATATCGTAGGTGGCGACCGCGGTCTGGTCCGCCAGCCGGCGCACCTCGGTGGCCACCACGGC
GAACCCGCGGCCGTACTCGCCGGCCTTCTCCGCCTCGATGGCGGCGTTCAGCGAGAGCAGGTTGGTCTGGTC
GGCGACCTTGACGATGGTGGTGACCACCTGGTTGATGTTGCCGGCCTTCTCGTTGAGGATCGCCAGCTTGGC
GTTGACCAGGTCGGCCGCGCCCATCACGTGGTGCATGGTTTCCTCCATGCGCGCCAGGCCCAACTGGCCGGA
ACCGGCCAGGGTCGAAGTCTGCTCGGCGGCGCCGGAGACTTCGCTCATGGTCCGCACCAGGTCGCGCGAGGT
GGCGGCGATCTCGCGAGAAGTGGCGCCGATCTCCGTGGTGGTCGCGGCGGTTTCGGTGGCGGTGGCCTGCTG
CTGCTTGGAGGTCGCGGCGATCTCGGTGACCGAGGTGGTGACCTGCACCGAAGAACGCTGGGCCTGCGACAC
CAGGCCCTTGAGTTCCTCGGCCATGCCATTGAAACCGGTCTCGATGGCGCCGAACTCGTCGCGGCGGCCAAG
GTTCAGGCGCGCGGTGAGGTCGCCGCCGGCCATCAGGTCGAGGCTGCGGACGATCTTCTGGATCGGCTGGGT
GATCGCCCGCAACAGCAGGAACCCGCAGATGCCGGCTACCACCACCGCCAGCAACAGGGTCACCAGCATGCT
CAGTTCGGCGTCGTCCACCGCGTTGACGATGTTCTCCGAGGCGCGATCGGCGATGTCCTTGTTCAGCTCGAT
CAGCTCGTTGAGGTACTTGCGACCGTCGCGCCAGTGCTCGGTCAACGGGCCGGCGACGAGCTTGCCGGCTTC
TTCGAAGCGTTTCTCGCGATACAGCTCGAGCACCTTGTCGTGCTGCTCCAGGTAGGCCTTGCGCACACCCAG
GAAACCGGCGAGCAGTTCGTGGTCGCGGGCCTCGTCCGGGTTCATGGTCTTCTGGTAGGAGGCGATCTGCTG
GTCCAGGCGCTCCTCGCTGGCAAGGATGCTGTCAGCCTCGGCCTTGCTCAGCTCGTGGTCGTCGGTGACGCC
GAACAGTTCCTGGGTCTGCAGGTAGTTGTCGGTCCACGAACTGCGTACCAGGGTGATGAAGTACATCCCCGG
CATGGCGTCGTCCTGGACACGGTAGGCGCCCTTTTCCACCGTCAACATCTTCACGTACGCAGTAGCGGCCAT
CAGCAGCATGATCGCGATGATCACGGCGAAACTTGCCAGGATTCGCTGGCGAACAGTCCAGTTCTTCACATT
TTTCCCCAAGACTCGAGTCCGGATTCGTTCCTGCCGCCACAACGGCCCGTCAATCGCGCGGACTGTATAGGC
CGTCCCCGGCACCGGCAAGCAGCGCCATAG

Translation:

MERDTVTASDFEAGYAVAQPVRHQVQLIDGEAGLAQRLHGLPGGLAQLHQRLVDLLGTGRLGLHALVDHLHP
RRQRLHLLDDLRQLLADLADLGDTAADLLGELVHAHHPGRYRRLDLAHHLLDIVGGDRGLVRQPAHLGGHHG
EPAAVLAGLLRLDGGVQREQVGLVGDLDDGGDHLVDVAGLLVEDRQLGVDQVGRAHHVVHGFLHARQAQLAG
TGQGRSLLGGAGDFAHGPHQVARGGGDLARSGADLRGGRGGFGGGGLLLLGGRGDLGDRGGDLHRRTLGLRH
QALEFLGHAIETGLDGAELVAAAKVQARGEVAAGHQVEAADDLLDRLGDRPQQQEPADAGYHHRQQQGHQHA
QFGVVHRVDDVLRGAIGDVLVQLDQLVEVLATVAPVLGQRAGDELAGFFEAFLAIQLEHLVVLLQVGLAHTQ
ETGEQFVVAGLVRVHGLLVGGDLLVQALLAGKDAVSLGLAQLVVVGDAEQFLGLQVVVGPRTAYQGDEVHPR
HGVVLDTVGALFHRQHLHVRSSGHQQHDRDDHGETCQDSLANSPVLHIFPQDSSPDSFLPPQRPVNRADCIG
RPRHRQAAP*

AnnotationID:6417 GeneID:6416

AnnotatorUID: diggins

Modification Date/Time: 2005-04-21 13:01:13

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16205

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29938