ViewGene

Locus Name:
GeneID:
Location:

GeneID:6410
TrivialName: PA14_16760
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_16760
PAO1 Ortholog Locus:
Sequence Length:1416
Protein Length:471
Start: 1436087
Stop: 1434672
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGACGCTGAACGCAGCCATTTCCAGGTCGAGGTCGTATTCGCGCCCCTCCTCCACCCGCTCGCTCCACTCC
GCGGCCAGGCGGCGAACCTCGCTGGCCGGCGGCGGCGCCAGGTGCGGCCGTACCTCCTTGCGCCGGGCCTGG
GCGGGGGCGCCCTCACGCATCATGAAGCTGCGCCCGTTCCACTGTTTCAGCATGCACAGCGCCGGCTGCCAG
CGTTGCAGGTCATCGCGGCGATCGACCATCAATTCCTGCACCGCCTGCGGATGGAACAGGCACCAGAGGCGC
TGCGGGCCCATGCGGGCGACCGCGAGGTCCGGCTGCGCGACGTGCATCTTCTGCAACCAGGCCAGCGGATCG
CGCTGCATCTCCAGCCAGTGGCGGGCGCCGGCACGCCCGTCGTTGGCCCAGGGCAGGTGCGCCAGGCGCCGG
CGAATCGGACAATCGATGGTCTGCTGCATGCTCGCCGCCTCCCTGCGGTGTCGACACTCAGCCCTTGCCCAG
GGCCTTCTTCGGATAGATGTCGTAGCGGCTGGACTTGCCTTCCAGGCTATAGCCGGGCTTGGGCCCTTCGAT
GATCGGCGCCTTGCGCGGGCGCTTCACCACCACCCGGTGGCTGGCCAGGGCCAGGGCCGCCTGCAACAGCGC
CGGAGCGTCGAGATCGTCGCCCACCAGCGGCCGGAACAGACGCATTTCCTTCTTCACCAATGCGCTCTTGTC
GCGATGGGGAAACATCGGGTCGAGGTAGACCACCTGCGGCGCCTCGCCGTCCCAGGCGCGCATCAGGTCCGC
CGAGTTGCCGCCGAGCAGACGCATCCGCGCGGCGATCGGCGCCACGTCGGGATCGCGCCCGGCGCGCTCCAG
GCCATCCTCGAGCAGGGCGGCGATCAGCGGCTGGCGCTCGACCAGGGTTACCTCGCAACCCAGGCTAGCGAG
GACGAACCCATCCCGGCCCAGGCCGGCCGTGGCATCCAGGACGCGCGGGCGGATGCCTGGCTGGACGCCGAC
CGCCTTGGCGATCATCTGCCCGCTGCCGCCGCCGAACTTGCGCCGGTGGGCGCTGGCGCCTTCGACGAAATC
GACCCGCACCGGACCGGGGGAGTCCGGCCCCAGTTGCAAGACCTGCAAGCCCTCCTCGCCGACCTGCACGGC
GAACTCCGCCTCGTCGTCCGCCGCCAACGGCAGGCCGAGCCGCTCCGCCCAGCGCCGCGCAGCCTCGGCGCA
ATCGGCGGACAGGGCTTGGACATGCAGGCGAGGAGCGGTGGAATCGGTCATGGTCGGGCAATCGTCGTGGAA
AGCGCGGATTTTGCCAGAGTTGGCCCGCGCGCGCTCACCGGCAGACCTTCCATAGGCCCATGTCGAGGTGGA
AGTGATCCCGGTGGGCGGCATTGTAGTCGGGCCCCAGCACCGCATTGA
Translation:
MTLNAAISRSRSYSRPSSTRSLHSAARRRTSLAGGGARCGRTSLRRAWAGAPSRIMKLRPFHCFSMHSAGCQ
RCRSSRRSTINSCTACGWNRHQRRCGPMRATARSGCATCIFCNQASGSRCISSQWRAPARPSLAQGRCARRR
RIGQSMVCCMLAASLRCRHSALAQGLLRIDVVAAGLAFQAIAGLGPFDDRRLARALHHHPVAGQGQGRLQQR
RSVEIVAHQRPEQTHFLLHQCALVAMGKHRVEVDHLRRLAVPGAHQVRRVAAEQTHPRGDRRHVGIAPGALQ
AILEQGGDQRLALDQGYLATQASEDEPIPAQAGRGIQDARADAWLDADRLGDHLPAAAAELAPVGAGAFDEI
DPHRTGGVRPQLQDLQALLADLHGELRLVVRRQRQAEPLRPAPRSLGAIGGQGLDMQARSGGIGHGRAIVVE
SADFARVGPRALTGRPSIGPCRGGSDPGGRHCSRAPAPH*
AnnotationID:6411GeneID:6410
AnnotatorUID: diggins
Modification Date/Time: 2005-04-21 10:10:05
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16196
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29927
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49412How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3517850Stop: 3519265
Length: 1416
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGACGCTGAACGCAGCCATTTCCAGGTCGAGGTCGTATTCGCGCCCCTCCTCCACCCGCTCGCTCCACTCC
GCGGCCAGGCGGCGAACCTCGCTGGCCGGCGGCGGCGCCAGGTGCGGCCGTACCTCCTTGCGCCGGGCCTGG
GCGGGGGCGCCCTCACGCATCATGAAGCTGCGCCCGTTCCACTGTTTCAGCATGCACAGCGCCGGCTGCCAG
CGTTGCAGGTCATCGCGGCGATCGACCATCAATTCCTGCACCGCCTGCGGATGGAACAGGCACCAGAGGCGC
TGCGGGCCCATGCGGGCGACCGCGAGGTCCGGCTGCGCGACGTGCATCTTCTGCAACCAGGCCAGCGGATCG
CGCTGCATCTCCAGCCAGTGGCGGGCGCCGGCACGCCCGTCGTTGGCCCAGGGCAGGTGCGCCAGGCGCCGG
CGAATCGGACAATCGATGGTCTGCTGCATGCTCGCCGCCTCCCTGCGGTGTCGACACTCAGCCCTTGCCCAG
GGCCTTCTTCGGATAGATGTCGTAGCGGCTGGACTTGCCTTCCAGGCTATAGCCGGGCTTGGGCCCTTCGAT
GATCGGCGCCTTGCGCGGGCGCTTCACCACCACCCGGTGGCTGGCCAGGGCCAGGGCCGCCTGCAACAGCGC
CGGAGCGTCGAGATCGTCGCCCACCAGCGGCCGGAACAGACGCATTTCCTTCTTCACCAATGCGCTCTTGTC
GCGATGGGGAAACATCGGGTCGAGGTAGACCACCTGCGGCGCCTCGCCGTCCCAGGCGCGCATCAGGTCCGC
CGAGTTGCCGCCGAGCAGACGCATCCGCGCGGCGATCGGCGCCACGTCGGGATCGCGCCCGGCGCGCTCCAG
GCCATCCTCGAGCAGGGCGGCGATCAGCGGCTGGCGCTCGACCAGGGTTACCTCGCAACCCAGGCTAGCGAG
GACGAACCCATCCCGGCCCAGGCCGGCCGTGGCATCCAGGACGCGCGGGCGGATGCCTGGCTGGACGCCGAC
CGCCTTGGCGATCATCTGCCCGCTGCCGCCGCCGAACTTGCGCCGGTGGGCGCTGGCGCCTTCGACGAAATC
GACCCGCACCGGACCGGGGGAGTCCGGCCCCAGTTGCAAGACCTGCAAGCCCTCCTCGCCGACCTGCACGGC
GAACTCCGCCTCGTCGTCCGCCGCCAACGGCAGGCCGAGCCGCTCCGCCCAGCGCCGCGCAGCCTCGGCGCA
ATCGGCGGACAGGGCTTGGACATGCAGGCGAGGAGCGGTGGAATCGGTCATGGTCGGGCAATCGTCGTGGAA
AGCGCGGATTTTGCCAGAGTTGGCCCGCGCGCGCTCACCGGCAGACCTTCCATAGGCCCATGTCGAGGTGGA
AGTGATCCCGGTGGGCGGCATTGTAGTCGGGCCCCAGCACCGCATTGA