ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6401

TrivialName: PA14_17240

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_17240

PAO1 Ortholog Locus:

Sequence Length: 1572

Protein Length: 523

Start: 1479352

Stop: 1477781

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAA46093.1| (X64876) orfA [Bordetella pertussis] Identities = 79/274 (28%), Positives = 100/274 (36%), Gaps = 60/274 (21%)

Sequence:

GTGAACGAAGGATACGGTCATGAAGGCCCCGGAGCAGAAATAACGCAAAAACGACAAGGCCCGGATTGTACC
GGGCCCGGTGGCAAAGCTACAGGTTCAAGAGCGGACGATGCGCCTCGGCTGCGCCGAGAAACGTCGCCCGCC
CCGCGCTCAGGCGCGGCGGTCGTCCCAGATACCCGGTTCGAGCTTCTGCTGGACTTCGGGGAACTGGCTGGC
GTCGAAGGTCGGCAGCTTGCCGGCCTTGCGCTGGGCGTTGTAGTCCTTGGCCAGCTTGATCGCGAGGTTGGA
CAGCAGCAGGATGGCGATCAGGTTGGTGATCGCCATCAGGCCCATCGACACGTCGGCGAGGTTCCAGACGAA
CGGCAGCGAAGCCAGCGCGCCGAACATCACCATCGCCAGCACGATCAGGCGGAAGATCAACAGGCCCGCCAG
GTGGTTGTGCTCGAGGAATACCAGGCAGTTCTCGGCATAGAAGTAGTTGGCGACGATCGAGGTGAAGGCGAA
GAACAGGATGATCACCGCCAGGAAGTAGCGGCCCCAGTCGCCGACCTGGCTGGTCAGGGCATTCTGCACCAG
CATGATGCCCTCGCCTTCCTGCGGTCCGGCCAGCAGGATGATGGCGGCGGAAGCGGTGCAGATCAGCAGGGT
ATCGATGAACACGCCGGCCATCTGCACGTAGCCCTGGGACGCCGGGTGCGGCGGATAGGGCGTGGCCGAGGC
GGCGGCGTTGGGCGCCGAGCCCATGCCTGCTTCGTTGGAGAACAAGCCGCGCTTGAAGCCGTTGAGGATCGC
CGCGCCGATGCCGCCGGCGGCGGCCTCGTGCCAGCCGAAGGCACTCTTCACCACCATCTCCAGGACGCCCGG
CAGTTCGCTGAGATTGAACAGGATGATGCCCACCGCCAGCAGCAGGTAGGCCACCGCCATGAAGGGTACCGC
CAGCTCGGAGAAGCGCGCGATGGAGCGCAGGCCGCCGAAGATGATCAACGCGGTGAGGATCACCACGGCGAT
GCCGCTGATCCAGGTCGGCACGCCGAAGGCGCCCTGCATGGCACCGGTGATGGTATTGGCCTGCACCGAGTT
GAAGACGAAACCGAAGGCGATGATCAGGAAGATCGAGAACAGGATGCCCATCCAGCGCGCGCCCAGGCCCTT
CTCCATGTAGTAGGCCGGGCCGCCACGGAACTGGCCCTTGTCGTCGCGAATCTTGAACAACTGGGCCAGGGT
CGCCTCGACGAAGCCGGTCGCCATCCCCACCAGGGCGATCGCCCACATCCAGAACACTGCGCCGGGACCGCC
GAGCGTGATCGCTACCGCCACGCCGGCGACGTTGCCGGTACCGACCCGCGCCGCCAGAGAGGTGCAGAGCGC
CTGGAACGAGGAGATTCCCGAGTCGTCCGACTGGCGGCTGCCCTTGAGCACGCTGAAGGTATGGCCGAAGTG
GCGGAACTGGATCAATCCCAGGCGCACAGTGAAGTACAGGCCGCAACCGACCAGCAGCCAGATGAGGATCTT
GCCCCAGATAAGGCCGTTGAGCAGGTCGACGACCTGAGTGGCGAATTCTTGCATGGATAA

Translation:

MNEGYGHEGPGAEITQKRQGPDCTGPGGKATGSRADDAPRLRRETSPAPRSGAAVVPDTRFELLLDFGELAG
VEGRQLAGLALGVVVLGQLDREVGQQQDGDQVGDRHQAHRHVGEVPDERQRSQRAEHHHRQHDQAEDQQARQ
VVVLEEYQAVLGIEVVGDDRGEGEEQDDHRQEVAAPVADLAGQGILHQHDALAFLRSGQQDDGGGSGADQQG
IDEHAGHLHVALGRRVRRIGRGRGGGVGRRAHACFVGEQAALEAVEDRRADAAGGGLVPAEGTLHHHLQDAR
QFAEIEQDDAHRQQQVGHRHEGYRQLGEARDGAQAAEDDQRGEDHHGDAADPGRHAEGALHGTGDGIGLHRV
EDETEGDDQEDREQDAHPARAQALLHVVGRAATELALVVANLEQLGQGRLDEAGRHPHQGDRPHPEHCAGTA
ERDRYRHAGDVAGTDPRRQRGAERLERGDSRVVRLAAALEHAEGMAEVAELDQSQAHSEVQAATDQQPDEDL
APDKAVEQVDDLSGEFLHG*

AnnotationID:6402 GeneID:6401

AnnotatorUID: diggins

Modification Date/Time: 2005-04-20 21:09:39

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16186

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29909