ViewGene

Locus Name:
GeneID:
Location:

GeneID:6392
TrivialName: PA14_17800
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_17800
PAO1 Ortholog Locus:
Sequence Length:1815
Protein Length:604
Start: 1531074
Stop: 1529260
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGCCGGGCGACCAGGAAGGCCAGGGCCAGGCGGCGCTGGTCGGGTGCCTGGCGGCTGGCTTCCCAGGCCAT
GAAGATCGCCGTGCACAGGTGGTAGAGGGCGCTGCCGGCCTGGCGCACCTGCTCGTCCTGGCGGCGCTCGGC
GACGTCGGCCATGGTCGCGACCACTCGCACCAGCAGTTCGTCGAAGAGGTCGCGGGCGTCCCCTGGCAGATC
GCTGTCATCCAGCAGCCGGCGCAGGTGGCGCTGCAAGGGTTCGAGCGCCTGTTCGCGGCTCACCGCACGGGC
GACGTCCAGCGCCACGATGTTGCTGGTGCCCTCCCAGATCGACCCCAGGTGGGCGTCGCGCACCAGGCGCGG
GTCGCTCCACTcctCGATGTAGCCGACCCCGCCGCGCACCTCCATGGCGTCGCCGGTGACCCGTCGCGCATC
GCGGCAGGCGCGGAACTTGATCAGCGGGGTGAGGATCCGCACGCATTTCTGCGCCTCGACCTCGCCGCCATC
GGCGCGCGGCAGCAGCGTGGCGATCTGCATGAACATCGAGCGCGCCTGTTCGGTGGGCAGCATCATCTTCAG
CAACTGCTTCTGCATCAGCGGCATGTCGATCAGGTGCTTGCCGAAGGCGCGCCGATGGCGGGCGACGAACAG
CGCCTCGCTCAGCGCCCGGCGCATCAGCCCGGCGGCGCGCACGCCGTTGGACAGGCGCGACATGTTGACCAT
GTCGGCCATCTGCTGGAAGCCGCGGCCGATCTCGCCGATCAGGTAGGCGCTGGCGCCTTCCAGGCGGACTTC
GCCGCTGGCCATGGAGCGGCTGCCCAGCTTGTCCTTCAGGCGGACGATGCGATAGGCGTTGCGCGTACCGTC
CTCGCGGACCTTCGGCAACAGGAACAGGGTCACGCCCTTCATTCCTTCCGGCGCGCCTTCGGGGCGGGCCAG
GACCATCGCCAGGTCGGCGTCCGGGTTGGAGCAGAACCACTTGTCGCCGTAGAGCTTCCACTCGCCGCCCTC
CTCCCGCGCCACGGTACGGGTCCGCGCCACGTCGGAGCCGGCGGCCTGCTCGGTCATGAACATGGCGCCCTG
GAACAGCTCGTCGAAATCCCGCGAGGCGAGGGACGGCAGATAGCGCTCAACCAGTTCCGGCGCGCCGAACCT
GCGCAGGGTGCGGGTAAGCGAGTCGGTCATGCTGACCGGGCAGCAAagGCCGAACTCGGCCTGTACGAACAG
GTGGGTGAGCGCATACTTGACCAGCGGCGGTGGGCCGTCCGGGCGATGGCTCATGGAAGCCAGGCCGAGTTC
GGCATAGGCCACCCGTTCGAGGGCGACGTAGTCCGGATGCTTGCGAATGCTCTGCAAATCCTCGCCGCGGCG
GGTGCGCGGCGCCAGCACCGGCGGGTTCTTGTCCGCCGCCAGCGCCAGCACGTCCAGCTCGCCGCCGGCACG
GGCGCCGAGCCGTTCGAGGAGCGGCCGCCATTCGGCGAGCAACGCCGGCGGCAGGTATACCTCCAGCAGCCG
CTCCAGGGCCGGATCGCAGGTGTAGAGATTCAGCCCACGGCTGTCGGGGATGTTCAGCGTATCTTCGCGAGG
TACTTCGGGCATGGCGGTCATGGCGCGGCTCCTGCTTGTCTTGCGCCGAGACTAGGCGAGTGGTTCGATAAG
CATCCAATACAAAAAAAATCATCGACGATAAGAAAAACAGATCGTAGAACCAGGTGCCTGCCATGGATCTCA
GACAGCTTCGCTACTTCATCGCGGTCGCCGAGGAACTGCATTTCGGACGCGCCGCGGCTCGCCTGTTCATCT
CCCAGCCGGCGCTGA
Translation:
MPGDQEGQGQAALVGCLAAGFPGHEDRRAQVVEGAAGLAHLLVLAALGDVGHGRDHSHQQFVEEVAGVPWQI
AVIQQPAQVALQGFERLFAAHRTGDVQRHDVAGALPDRPQVGVAHQARVAPLLDVADPAAHLHGVAGDPSRI
AAGAELDQRGEDPHAFLRLDLAAIGARQQRGDLHEHRARLFGGQHHLQQLLLHQRHVDQVLAEGAPMAGDEQ
RLAQRPAHQPGGAHAVGQARHVDHVGHLLEAAADLADQVGAGAFQADFAAGHGAAAQLVLQADDAIGVARTV
LADLRQQEQGHALHSFRRAFGAGQDHRQVGVRVGAEPLVAVELPLAALLPRHGTGPRHVGAGGLLGHEHGAL
EQLVEIPRGEGRQIALNQFRRAEPAQGAGKRVGHADRAAKAELGLYEQVGERILDQRRWAVRAMAHGSQAEF
GIGHPFEGDVVRMLANALQILAAAGARRQHRRVLVRRQRQHVQLAAGTGAEPFEERPPFGEQRRRQVYLQQP
LQGRIAGVEIQPTAVGDVQRIFARYFGHGGHGAAPACLAPRLGEWFDKHPIQKKSSTIRKTDRRTRCLPWIS
DSFATSSRSPRNCISDAPRLACSSPSRR*
AnnotationID:6393GeneID:6392
AnnotatorUID: diggins
Modification Date/Time: 2005-04-20 11:11:56
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16173
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29891
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49394How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3422862Stop: 3424676
Length: 1815
Start Codon: GTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGCCGGGCGACCAGGAAGGCCAGGGCCAGGCGGCGCTGGTCGGGTGCCTGGCGGCTGGCTTCCCAGGCCAT
GAAGATCGCCGTGCACAGGTGGTAGAGGGCGCTGCCGGCCTGGCGCACCTGCTCGTCCTGGCGGCGCTCGGC
GACGTCGGCCATGGTCGCGACCACTCGCACCAGCAGTTCGTCGAAGAGGTCGCGGGCGTCCCCTGGCAGATC
GCTGTCATCCAGCAGCCGGCGCAGGTGGCGCTGCAAGGGTTCGAGCGCCTGTTCGCGGCTCACCGCACGGGC
GACGTCCAGCGCCACGATGTTGCTGGTGCCCTCCCAGATCGACCCCAGGTGGGCGTCGCGCACCAGGCGCGG
GTCGCTCCACTcctCGATGTAGCCGACCCCGCCGCGCACCTCCATGGCGTCGCCGGTGACCCGTCGCGCATC
GCGGCAGGCGCGGAACTTGATCAGCGGGGTGAGGATCCGCACGCATTTCTGCGCCTCGACCTCGCCGCCATC
GGCGCGCGGCAGCAGCGTGGCGATCTGCATGAACATCGAGCGCGCCTGTTCGGTGGGCAGCATCATCTTCAG
CAACTGCTTCTGCATCAGCGGCATGTCGATCAGGTGCTTGCCGAAGGCGCGCCGATGGCGGGCGACGAACAG
CGCCTCGCTCAGCGCCCGGCGCATCAGCCCGGCGGCGCGCACGCCGTTGGACAGGCGCGACATGTTGACCAT
GTCGGCCATCTGCTGGAAGCCGCGGCCGATCTCGCCGATCAGGTAGGCGCTGGCGCCTTCCAGGCGGACTTC
GCCGCTGGCCATGGAGCGGCTGCCCAGCTTGTCCTTCAGGCGGACGATGCGATAGGCGTTGCGCGTACCGTC
CTCGCGGACCTTCGGCAACAGGAACAGGGTCACGCCCTTCATTCCTTCCGGCGCGCCTTCGGGGCGGGCCAG
GACCATCGCCAGGTCGGCGTCCGGGTTGGAGCAGAACCACTTGTCGCCGTAGAGCTTCCACTCGCCGCCCTC
CTCCCGCGCCACGGTACGGGTCCGCGCCACGTCGGAGCCGGCGGCCTGCTCGGTCATGAACATGGCGCCCTG
GAACAGCTCGTCGAAATCCCGCGAGGCGAGGGACGGCAGATAGCGCTCAACCAGTTCCGGCGCGCCGAACCT
GCGCAGGGTGCGGGTAAGCGAGTCGGTCATGCTGACCGGGCAGCAAagGCCGAACTCGGCCTGTACGAACAG
GTGGGTGAGCGCATACTTGACCAGCGGCGGTGGGCCGTCCGGGCGATGGCTCATGGAAGCCAGGCCGAGTTC
GGCATAGGCCACCCGTTCGAGGGCGACGTAGTCCGGATGCTTGCGAATGCTCTGCAAATCCTCGCCGCGGCG
GGTGCGCGGCGCCAGCACCGGCGGGTTCTTGTCCGCCGCCAGCGCCAGCACGTCCAGCTCGCCGCCGGCACG
GGCGCCGAGCCGTTCGAGGAGCGGCCGCCATTCGGCGAGCAACGCCGGCGGCAGGTATACCTCCAGCAGCCG
CTCCAGGGCCGGATCGCAGGTGTAGAGATTCAGCCCACGGCTGTCGGGGATGTTCAGCGTATCTTCGCGAGG
TACTTCGGGCATGGCGGTCATGGCGCGGCTCCTGCTTGTCTTGCGCCGAGACTAGGCGAGTGGTTCGATAAG
CATCCAATACAAAAAAAATCATCGACGATAAGAAAAACAGATCGTAGAACCAGGTGCCTGCCATGGATCTCA
GACAGCTTCGCTACTTCATCGCGGTCGCCGAGGAACTGCATTTCGGACGCGCCGCGGCTCGCCTGTTCATCT
CCCAGCCGGCGCTGA