ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6389

TrivialName: PA14_17870

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_17870

PAO1 Ortholog Locus:

Sequence Length: 1494

Protein Length: 497

Start: 1536205

Stop: 1534712

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG30261.1|AF307334_7 (AF307334) unknown [Ectothiorhodospira shaposhnikovii] Identities = 90/323 (27%), Positives = 132/323 (40%), Gaps = 13/323 (4%)

Sequence:

TTGCGCAAGGCCAGGCTGGCCCGCGAGTCTTCGAGGAAGCCCTCGGCCAGGGCGGGAACGCTATCGCCGGCA
AGGATCGGCAGCAGGAAAAACGCGCATTTCTTGTTGTTGTTCATACGCACTCCGAACGGGCGCCTGGGCGCC
TCTTTTTCTAGGGGGAACGGTGTCTCATCGGCAGCGCTCGATCACCATCGCCACGCCCTGGCCGAGCCCGAC
GCACAGGCTGACCACCGCGTAGCGCCGCTCGATGCGTTGCAGCCCGCGGGCGGCGGTGAGCACCAGGCGCGC
ACCGGAGGCGCCGAGCGGATGGCCGAGGGCGATGGCGCCGCCATGGGGATTGACCCGCGGGTCCTCGTAGTC
CAGGCCGAGCAGCTTCAGGCAGGCCAGGACCTGCGGCGCGAAGGCTTCGTTGATCTCGATCAGGCCGACCTC
GTCCAGGTCGATGCCGGCGCGTTGCAGCGCGCGGAGGATCGCCTGCTGCGGGCCGATGCCCATCAACCGGGG
CTCCACGCCGACGCTGGCGCTAGCGAGGATCCGCGCCAGCGGCCGGATGCCCTCGCGCTCGCCGATCGCGCG
GTCGCCCAGCAGCACTACCGCCGCCCCGTCGTTGATCCCCGACGCGTTGCCGGCGGTCACTACCCCGCCGGC
GAACAACGCCGGCAAGCGCGCCAGGGCCGCCAGGTCGGCCTGCGGCCGCGGATGCTCGTCGCGCTCCACCAG
CCGCGTCTCGCCCTTGCGTCCGGCGCGCACCTCCACCGGAAGGATTTCGCCGAGGAAAAAGCCCTCCTCCAG
CGCAGCCTGGTAGCGCGCCTGGGAAGAAGCGGCGAAACGGTCGGCATCCTCGCGGGCGATGCCGAAGGCGCG
GGCCACGTTGTCGCCGGTCTCCGGCATGCTGTCGTTGCCATAGCGCTCGACCAGCCTGGGGTTGGCGAAGCG
CGCGCCGATGGTGCTGTCGAAGACCTCCAGCGTGCGGCTGAAGGCGCTCTCCGCCTTGCCCATGACGAACGG
CGCCCGGGACATGCTTTCGGCGCCGCCGGCCAGGTACAGCCGGCCCTCGCCGCAACTGATCGCGCGCGCCGC
GTCGATCACCGCCGACAGTCCGCTGGCACACAAGCGGTTGACCGTCTGCCCAGGCAGCCGCGCCGGCAGGCC
GGCTGCGAGCAGCGCGTTGCGCGCCAGGTTGCGGCTGTCTTCGCCGGCCTGGTTGGTGCAACCGAGGATCAC
ATCCTCCAGGTCGTCGACGGCGAACCCGGAGGTTTCCGCGAGACGCGCCAGCAGCAGGCCGGCCAGGTCGTC
CGGACGCACCGTCGAGAGTGCACCGGCATGCCGGCCGAAAGGCGTACGCAGGCCGGCGTAGATATAGGCATC
GAGCATGGTGTGTTTCTCCGCGAAGGGATCAGGAGGCCAACGGGCTGTCCGGCTGGCGCAGGGAAAGGCCCA
GTTGGGCGCGCCGGCGCAGCCAGGGACTGGGGCGATAGCGCGGGTCGCCGCTGA

Translation:

MRKARLARESSRKPSARAGTLSPARIGSRKNAHFLLLFIRTPNGRLGASFSRGNGVSSAALDHHRHALAEPD
AQADHRVAPLDALQPAGGGEHQARTGGAERMAEGDGAAMGIDPRVLVVQAEQLQAGQDLRREGFVDLDQADL
VQVDAGALQRAEDRLLRADAHQPGLHADAGASEDPRQRPDALALADRAVAQQHYRRPVVDPRRVAGGHYPAG
EQRRQARQGRQVGLRPRMLVALHQPRLALASGAHLHRKDFAEEKALLQRSLVARLGRSGETVGILAGDAEGA
GHVVAGLRHAVVAIALDQPGVGEARADGAVEDLQRAAEGALRLAHDERRPGHAFGAAGQVQPALAATDRARR
VDHRRQSAGTQAVDRLPRQPRRQAGCEQRVARQVAAVFAGLVGATEDHILQVVDGEPGGFRETRQQQAGQVV
RTHRRECTGMPAERRTQAGVDIGIEHGVFLREGIRRPTGCPAGAGKGPVGRAGAARDWGDSAGRR*

AnnotationID:6390 GeneID:6389

AnnotatorUID: diggins

Modification Date/Time: 2005-04-20 11:11:37

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16170

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29885