ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6387

TrivialName: PA14_17970

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_17970

PAO1 Ortholog Locus:

Sequence Length: 1512

Protein Length: 503

Start: 1543462

Stop: 1544973

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAB52056.1| (AL939111) putative ATP-binding RNA helicase [Streptomyces coelicolor A3(2)] Identities = 89/326 (27%), Positives = 121/326 (37%), Gaps = 64/326 (19%)

Sequence:

ATGGGTGGACTTCACCGCCTTGTCGCCGGTGTGCATCAGCAGGAAGCAGCCGGTGCCGTAGGTGTTCTTCGC
CTGGCCCGGTTCCACGCACATCTGGCCGAACAGGGCGGCCTGCTGGTCGCCGGCGATCCCGGCGATCGGCAG
CTCGCCGCCGCCGACCCCGCCGATCCGGGCGTTGCCGTAGACCTCCGAAGAGTTGCGCACCTCGGGCAGCAT
CGAGCGGGGAATGTCGAGCACCTCGAGCATCCGTGCGTCCCAGTCGAGGCTGTGGATGTTGAACAGCATGGT
CCGCGAGGCATTGGTGTAGTCGGTGACGTGGACCTTGCCTTCGGTGAGCTTCCAGATCAGCCAGGTGTCGAT
GGTGCCGAACAACAGGTCGCCGTTGCGCGCGCGTTCGCGGGCGcctTCGACGTTGTCGAGGATCCACTTCAG
CtTGGTCCCGGAAAAGTACGGGTCGGTGACCAGACCGGTGGTTTCGCGGATGTAGTCTTCCAGCCCGTCGCG
CTTGAGCTGCGCGCAGATCGCCGCGCTGCGCCGGCACTGCCAGACGATGGCGTTGTGGATCGGCCGACCGCT
GTGACGGTCCCAGACCACCGTGGTCTCGCGCTGGTTGGTGATGCCGATGGCGGCCACCTGGTCGTGCTCGAT
GCTGGCTTGGGCGAGGGCCTCGACCAGGGTCGAACTCTGCGTGGCCCAGATTTCCATCGGATCGTGTTCGAC
CCAGCCGGCCTGCGGATAGAACTGGGCGAACTCGCGCTGGGCCTGGCTGACCACGTTGGCATCGCGGTCGAA
GACGATGGCGCGGGAGCTGGTGGTGCCCTGGTCCAGGGCGACGACGTATTTCTTGTTGTGCTTGTCGGTCAT
GGCTGTGGCCTTGTGGCTATGGCAGGAAAGAGCGGGCGGTCAGGAAGCGCGAACCTTCTCCGGCTCGGCTTC
GGCGGGCGCCGCGGCGCTCGGCAGATGGCGCGCGATCAGTACACGATAGCCGCCGGCGCCGAGGCAGGCACC
GAGGATCGGGGCGAAGATCGGCACCAGGAAGTAGGGAATCTCGCGGCCGCCGGTGAAGGCGATGGGCCCCCA
GCCGGCCAGGTAGGTCATCAGCTTGGGGCCGAAGTCGCGCGCCGGGTTCATCGCGAAACCGGTCAGCGGGCC
CATGGCGCTGCCGATCACGGCGATCAGCAGGCCGATCAGCAGCGGCGCCAACGGACCGCGCGGCAGGCCGTT
GCCGTCGTCGGTAAGAGCCATGATCACCGCCATGAGGATGGCGGTGATCACCACTTCGACGAGGAACGCCTG
GCCGACCGACAGCGCCGGGTGCGGATAGGTGGAGAACACCGAGGCCAGGGCCAGGCTGTCCTGGCTGCCGCG
GACGATGTTCTGCGCCTGTTCGAACTCGATGAACAGGCTGCTGTAGAGAGTGTAGACCAGCGCTGCGGCGCA
GAACGCACCGGCCACCTGGGCGGTGATGTAGAACGGCAGCTTGCGCCCCTCGAAGCCGGCGAACAGCCATAG

Translation:

MGGLHRLVAGVHQQEAAGAVGVLRLARFHAHLAEQGGLLVAGDPGDRQLAAADPADPGVAVDLRRVAHLGQH
RAGNVEHLEHPCVPVEAVDVEQHGPRGIGVVGDVDLAFGELPDQPGVDGAEQQVAVARAFAGAFDVVEDPLQ
LGPGKVRVGDQTGGFADVVFQPVALELRADRRAAPALPDDGVVDRPTAVTVPDHRGLALVGDADGGHLVVLD
AGLGEGLDQGRTLRGPDFHRIVFDPAGLRIELGELALGLADHVGIAVEDDGAGAGGALVQGDDVFLVVLVGH
GCGLVAMAGKSGRSGSANLLRLGFGGRRGARQMARDQYTIAAGAEAGTEDRGEDRHQEVGNLAAAGEGDGPP
AGQVGHQLGAEVARRVHRETGQRAHGAADHGDQQADQQRRQRTARQAVAVVGKSHDHRHEDGGDHHFDEERL
ADRQRRVRIGGEHRGQGQAVLAAADDVLRLFELDEQAAVESVDQRCGAERTGHLGGDVERQLAPLEAGEQP*

AnnotationID:6388 GeneID:6387

AnnotatorUID: diggins

Modification Date/Time: 2005-04-20 09:09:23

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12592

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29881