ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6386

TrivialName: PA14_18000

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_18000

PAO1 Ortholog Locus:

Sequence Length: 1575

Protein Length: 524

Start: 1547532

Stop: 1545958

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK22647.1| (AE005742) ISCc2, transposase, fusion [Caulobacter crescentus CB15] Identities = 129/492 (26%), Positives = 173/492 (35%), Gaps = 111/492 (22%)

Sequence:

GTGAAGCCGCCGGCAAAAACGCCGCCTTTTTCCGCGAAACGCCGCTCAGGCCTCGCTGCGCACCCGTCGCAC
CGCGTTCTGCCAGCCGGCGTAGAGTTCGCCGCGGCGCTCCTCGGCCATGTGTGCGGCGAAGCGGCGCTGCAG
GTGCCAGTGGCTGGCGATGTCGTCCAGGTCGCGATAGAAGCCTGCCTTCAGCCCGGCCATGTAGGCCACGCC
GAGGGCGGTGGTCTCGGTGACTTCCGGGCGCTCCACGGTGACACCAAGGATGTCGGTGAGAAATTGCATCAC
CCAGTTGTTCACCACCATCCCGCCGTCCACCCGCAGCGCGCTGGGCGGCGTGCCGTCCTGGCGCATCGCTTC
GAGCAGGTCGCGGGTCTGGTAGCAGACCGATTGCAGACCGGCGGTGACGATCTCCTTGATTCCGGTGTCGCG
GGTCAGGCCGAAGATCGCGCCGCGCGCCTTCGGGTCCCAGTAGGGCGCGCCGAGGCCGGTAAAGGCCGGCAC
CAGGTAGACGCCGTTGGAGTCGCCGGCCTGGATCGCCAGGGCTTCGCTCTCGTGGGCGTGGTCGATCAGCTT
GATGCCGTCGCGCAGCCATTGCACCGCGGCGCCGGCGACGAAGATGCTGCCCTCCACCGCGTAGCTGACCTT
GCCGTCCAGACGGTAGCCAACCGTGGTGAGCAGGCGGTTCTTCGAGGTCACCGGCTGCTCGCCAGTGTTCTG
GATCATGAAGCAGCCGGTGCCGTAGGTGCTCTTCACCATGCCCGGCTGGAAGCAGGCCTGGCCGATCAGCGC
GGCCTGCTGGTCGCCGGCCATGCCCAGCACCGGGATCGCCGCGCCAAGCAGCGACGGCTCGCTGACGCCGAA
CTCCGCCGCGCAGTCGAGTACCTCCGGCAGCAGGCTGCGCGGGATCTCGAACAGCGCCAGCAATTCCTCGTC
CCAGTCCTGGCTGTGGATGTTGAACAGCAGGGTGCGCGAAGCGTTGGTCGCGTCGGTGCGATGGGAGCGGCC
GCCGGTCAGGCGCCAGAGCAGGAAGCAGTCGACGGTGCCGAAGCGCAGCTCGCCGCGTTCGGCGCGCTGGCG
GGCGCCGGGCACGTTGTCGAGGATCCAGCGCAGCTTGGTGGCGGAGAAATACGGATCGATCAGCAGCCCGGT
GCGCGCGCTGACGTTCGCCTCGTGGCCGGCGGCCTTGAGTTCGGCACAGTAGTCGGCGGTACGACGATCCTG
CCAGACGATGGCCGGGTGGATCAGGTCGCCGCTGGCGGCGTCCCAGACCAGCGTGGTCTCGCGCTGGTTGGT
GATGCCGATGGCGGCGATGTCGCCCGCGCGCAAGCCCTTGCGAGCGAGCGCGTCGCGACAGACCTGGAGGGT
GGTCAGCCAGATTTCCTCGCCGTCGTGCTCCACCCAGCCGTCCTTCGGGAAGTACTGCTTGAATTCCTGCTG
GCAGCTCGTCACCGGCAAGCCCTGGGCACTGAACACGATGGCGCGGGAGCTGGTGGTGCCCTGGTCGATGGC
GAGGAGATAGTGGGACATGGAAAACCTGACAGATTGAAAAGTAAGACGAATGCCGACCGCTAG

Translation:

MKPPAKTPPFSAKRRSGLAAHPSHRVLPAGVEFAAALLGHVCGEAALQVPVAGDVVQVAIEACLQPGHVGHA
EGGGLGDFRALHGDTKDVGEKLHHPVVHHHPAVHPQRAGRRAVLAHRFEQVAGLVADRLQTGGDDLLDSGVA
GQAEDRAARLRVPVGRAEAGKGRHQVDAVGVAGLDRQGFALVGVVDQLDAVAQPLHRGAGDEDAALHRVADL
AVQTVANRGEQAVLRGHRLLASVLDHEAAGAVGALHHARLEAGLADQRGLLVAGHAQHRDRRAKQRRLADAE
LRRAVEYLRQQAARDLEQRQQFLVPVLAVDVEQQGARSVGRVGAMGAAAGQAPEQEAVDGAEAQLAAFGALA
GAGHVVEDPAQLGGGEIRIDQQPGARADVRLVAGGLEFGTVVGGTTILPDDGRVDQVAAGGVPDQRGLALVG
DADGGDVARAQALASERVATDLEGGQPDFLAVVLHPAVLREVLLEFLLAARHRQALGTEHDGAGAGGALVDG
EEIVGHGKPDRLKSKTNADR*

AnnotationID:6387 GeneID:6386

AnnotatorUID: diggins

Modification Date/Time: 2005-04-20 09:09:41

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16166

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29879