ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6380

TrivialName: PA14_18240

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_18240

PAO1 Ortholog Locus:

Sequence Length: 2682

Protein Length: 893

Start: 1566310

Stop: 1563629

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAC16118.1| (AF010496) potential exonuclease [Rhodobacter capsulatus] Identities = 129/501 (25%), Positives = 172/501 (34%), Gaps = 63/501 (12%)

Sequence:

ATGCAGGCCGTCGGCCTGGGCCGAAAGACTCGGGTGGCCGCGATCGATGGCCAGGGTGTACTGGGTCAGGTC
GTTGGTGCCGACGCTGAAGAAATCCACCTCGCGGGCCAGCACCGGCGCGAGCAACGCCGCCGAGGGCACCTC
AACCATGATCCCCAGTTGCAGGTCGGCCAGCGGGATTTCCTCGCGCAGGCGCAGCGCCAGGTCACGCGCCTG
GCGCCATTCGTCGAGGCTGCCGACCATCGGAAACATCACCCGCAGCGGTCGCTCCCCGGCGGCGCGGAACAG
CGCGCGCAACTGGGTCTCGAGGATCTGCGGTCGCTGCAGGGTCAAGCGGATACCGCGCAGGCCCAGATAGGG
ATTCTCTTCGTGGGAAATCGGCCAGTACGGCAGCGGCTTGTCCCCGCCGACATCCAGGGTCCGCGCCACCAG
CGGACGTCCGTCGAGGGCGTCGAGCACCCGACGGTATTCCGCTTCCTGGGTCGCCAGGTCCGGCGCGCGGGC
GTTGTTCATGAAGACGAACTCGGTGCGCAGCAGGCCAACGCCCTCGGCGCCCAGCTCCACCGCGCGCGCGGC
GCCGGCGGTGTCGCCAAGGTTGGCGCAGACTTCCACCGCGTGGCCGTCGCGGGTCCGCGCAGGCTCCAGACG
CTGCGCGTCGGCGCGGGCCTGGCGCTGCTGGCGGGCGTCGCGCTCGGCGGCGGCCTGCTGCAACTGTTCGGT
GCTCGGCGCCACCTGCAGCCAGCCGTGTTCGCCATCCAGCAGCAGTGCCGTGCCCGGCTCCAGGCCGAGCAC
CGCCGCGCCGGCGCCGACCAATGCCGGAATGCCGAGGGCGCGGGCGATGATCGCGCTGTGCGAAGTGGCGCC
GCCGCGCGCCGTGAGGATGCCGGCGACCCGCTGGGCGTCGAGGCGGGCGACATCGGAGGGGCCGACCTCGTC
CATCACCAGGATGTACGGCTGCTCCGGCTCGCGCGGCGCCTCCACCCCGCAGAGCCTGGCCAGCACCCGCCG
GCCGAGGTCGCGGAGGTCGGCGGCGCGCTCGGCGAGCAAGGTGTCGTGCAGCGCCTCCTGCTGCGCCGCGCT
GTCTTCCACTACCCGACTCCAGGCCGCTTCGGCGCTTTCGCCGCGATTCAGGCGCAGTTGCACCTGCTCGGC
CAGTTCCGGATCGTCGAGCATCTCCCGGTGGGTGACGAAAATCTCGCGGATCGCCTTCACCGTGCTGCGTTC
GACCAGGCCGACGATCTCCTCGTCCACCGCCCGCTTGGCCCGCAGCAGGCGCTCGCGTTCATGGGCCGGCGA
CTCGCCACGCGGCTGGAACTCGAAGCGCTGCGCCACCTGGACATGCGCCGGACCACTGGCGATGCCCGGCGA
CGCGGCGATCGCCTGCAGGCGCTCGCCGGCGCGCAGCGGCGCCGGCCGGGCATCCTCTTCCGCCTCGCCGAC
GGCATCGGGCAAGGCCTCCTCCGCCAGCGCTTCGACCTCCTCGCCGAGCCCCTCGCGCACCGCGGCCAGCAA
GGCTGGCAGCGCGTCCTCGGCGATCGCCGGCTCGGCGCTGAACTCCAGCGTCTGGCCGCGTCGCGCGCCGAG
GGCGAGCAGCTTGCTCAGGCTCTTCgcCgagacGGGGgccgccTCGCTGTCggccagGCGTACCCGGATcTC
GCCGGCGaAGCccTTGGCCAGCTGCGCCAGCGCCTGGGCCGGGCGGGCATGCAGGCCATGCGGGTTGGCCAG
GACCGCTCGCGCGCTGGGCCAGTCCGGCGGCAGCTCGCCACCGAGCGCCGCGAGTACGCTGCGGCTGCTGGT
GGCGCGCACCAGCTCGGCGCCACGCCCTTCCAGCAACAGGTCGCACAGGCGTTCGAGCAGCGCCTGGTGCGC
TTCGCCCAGGCTGGCCAGGCAGAACAGCCCGGTGACCGGTTGCCCCTGGTGCTGCAACGGTTGCGCCGGAGT
AACGAAGGCCAGCCCGGGGCGCTTCACCAATTGTTCGCTGTGCAACCAGCACAGCCCGTCGCCCAGCGGCAA
CGGTTCGGTCTGCTGGAGCACGGCGGCGAAGCCGTTCTCCACGCAGCCGGCCTTCTTCAACAGGCGCGCGCC
GAGCCAGGCCAGTTCGTCGAGGTCCTCGGCGTTCTGGCCGAGGCCGACCAGTTGTGCGTCCAGCGCCAGTTC
CTGCGGCGCGCCCTGCAACAGGCCGAGGACTTCCTCGGCGCTGGCGGCCGCGCTCAGCGCCGGTCCCAGGTC
GGCCTCGCCGAGGGCGCGGGTGAGCAATTGCAGGAGCTGCAGGTGTTCGTCGGACTTCGCCGCGATGCCGAT
GGCCAGGTAGACCTGCTGGCCATCGCCCCAGTCCACTCCCTCGGGGAATTGCAGCAGGCGCACACCGGTGCT
GAAGACCAGCTCGCGGGTATCCGGGGTCCCATGGGGTATGGCGATGCCCTGGCCGAGGTAGGTGGAGCCTTG
TGCCTCGCGCGCCTTCAGGCCCTCGGCATAGCCGGGCGCGGCCAGGCCGTCGGCGACCAGCGCCGCGCCGAG
CAGGCGCAGGGCTTCGGCCTTGTCCGCGGCGCGCTGGCCCATGCGGATCTGCCGGGTATCGAGTTCGAGCAT
GGAAACCTCCTCAGGAGCGAACGGCTCCCCGTCTCACGTCCGGATCGTCCCGCCGCGCCGAGGCGCGGGCGC
GGGATGTGCCGGCGGTAG

Translation:

MQAVGLGRKTRVAAIDGQGVLGQVVGADAEEIHLAGQHRREQRRRGHLNHDPQLQVGQRDFLAQAQRQVTRL
APFVEAADHRKHHPQRSLPGGAEQRAQLGLEDLRSLQGQADTAQAQIGILFVGNRPVRQRLVPADIQGPRHQ
RTSVEGVEHPTVFRFLGRQVRRAGVVHEDELGAQQANALGAQLHRARGAGGVAKVGADFHRVAVAGPRRLQT
LRVGAGLALLAGVALGGGLLQLFGARRHLQPAVFAIQQQCRARLQAEHRRAGADQCRNAEGAGDDRAVRSGA
AARREDAGDPLGVEAGDIGGADLVHHQDVRLLRLARRLHPAEPGQHPPAEVAEVGGALGEQGVVQRLLLRRA
VFHYPTPGRFGAFAAIQAQLHLLGQFRIVEHLPVGDENLADRLHRAAFDQADDLLVHRPLGPQQALAFMGRR
LATRLELEALRHLDMRRTTGDARRRGDRLQALAGAQRRRPGILFRLADGIGQGLLRQRFDLLAEPLAHRGQQ
GWQRVLGDRRLGAELQRLAASRAEGEQLAQALRRDGGRLAVGQAYPDLAGEALGQLRQRLGRAGMQAMRVGQ
DRSRAGPVRRQLATERREYAAAAGGAHQLGATPFQQQVAQAFEQRLVRFAQAGQAEQPGDRLPLVLQRLRRS
NEGQPGALHQLFAVQPAQPVAQRQRFGLLEHGGEAVLHAAGLLQQARAEPGQFVEVLGVLAEADQLCVQRQF
LRRALQQAEDFLGAGGRAQRRSQVGLAEGAGEQLQELQVFVGLRRDADGQVDLLAIAPVHSLGELQQAHTGA
EDQLAGIRGPMGYGDALAEVGGALCLARLQALGIAGRGQAVGDQRRAEQAQGFGLVRGALAHADLPGIEFEH
GNLLRSERLPVSRPDRPAAPRRGRGMCRR*

AnnotationID:6381 GeneID:6380

AnnotatorUID: diggins

Modification Date/Time: 2005-04-20 06:06:33

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12580

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29867