ViewGene

Locus Name:
GeneID:
Location:

GeneID:6376
TrivialName: PA14_18390
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_18390
PAO1 Ortholog Locus:
Sequence Length:1440
Protein Length:479
Start: 1578678
Stop: 1580117
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCAGGGCCGGTTCTGCGGTGCGCCCGTAGACGTCTTCCAGGCGCTCGATGTCGTCCTCGCCGAGGTAGCT
GCCGGACTGCACCTCGATGATCTCCAGCGGGATCTTGCCGGGGTTGGCCAGGCGGTGCACGGAGGCGATCGG
GATGTAGGTCGACTGGTTCTCGGTGAGCAGGAAGGTCTTGTCGTCGCAGGTCACCTGGGCGGTCCCGGAAAC
CACGATCCAGTGCTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCGCGCGCCGGGCTTCACGGTGATGTG
CTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTAGGAGCCCCACGGGCGGTAGACCTCGCAGTGGTT
CTGGGTCTCGCTACGGCCCTGGGCGTCGAGGTCCTTGACCACGTGCTTGACGTCCTGCACCCGGTCCTTGTG
GGCGATCATCATGGCGTCCTTGGTTTCCACCACCACGATGTCCTCCAGGCCGATCACCGAGACCAGCTTGCC
GTTGCCGTGCACCAGGCAGTTGTGGCTGTCGTGGACCAGCACGTCGCCCTTGGTGACGTTGCCGTTGGCGTC
CTTGGCGTGCACGTCCCAGATCGACGACCAGCTGCCGACGTCGTTCCAGCCGGCGGACAGCGGCACCACGCA
GGCGCGCGAGGTCTTCTCCATCACCGCGTAGTCGATGGAGTTGTCCGGGCAGCATTCGAAGGTGGCGGCGTC
GATGTTCACCAGGTCGCCGTCGTGCTGGCTGCGCTCCAGGGCCAGCAGGCAGGTGTCGTAGATGTCGGCGTC
GTGCTTCTTCAGTTCTTCCAGGTAGCGGCTGGCGCGGAACAGGAACATGCCGCTGTTCCAGTAGTAGCCGCC
GGCGGCGACGAACTCGCGGGCGCGGGCTTCGTCGGGTTTCTCGACGAAGCTCTGCACCCGGCTGACGCCTTC
CGGCAGTTGCGCATCGGCGCTCGCGCGGATGTAGCCGTAACCGGTCTCGGGGCGGCTGGCGGGAATGCCGAA
GAGCACCATCTCGCCCTTTTCGGCGGCGTTGGTGGCCAGCGCCAGGGCCTGCTGGAAGGCGCGCTGGTCCTC
GATCACGTGGTCGGCGGGAAGGATCAGCAGCAGTTCGTCGCGGCCTTCGGCGACCAGTTTCATCGCGGCGAT
GGCCACCGCCGGCGCCGTGTTGCGGCCGAAGGGTTCGAGCAGGATCGCCTGGCTCGCCAGGTTCTGCGCCTC
CAGCTGTTCCTGGACGATGAAGCGGTGCTCCTTGTTGCACACCAGCAGCGGCGCCTGCATGCCGTCGAAGGC
CAGGCGCTTGATGGTCTGCTGGAACAGGGTGTCGTCGCCGGTGAGGGCGAGGAACTGCTTGGGGTACTGCTT
GCGGGAAAGAGGCCAGAGTCGCGAGCCGCTGCCACCGGAAAGGATTACTGGGATCATGTTGTTTCTCCTTGA
Translation:
MQGRFCGAPVDVFQALDVVLAEVAAGLHLDDLQRDLAGVGQAVHGGDRDVGRLVLGEQEGLVVAGHLGGPGN
HDPVLGAVVVHLQREARAGLHGDVLDLEAAAHVHRVVGAPRAVDLAVVLGLATALGVEVLDHVLDVLHPVLV
GDHHGVLGFHHHDVLQADHRDQLAVAVHQAVVAVVDQHVALGDVAVGVLGVHVPDRRPAADVVPAGGQRHHA
GARGLLHHRVVDGVVRAAFEGGGVDVHQVAVVLAALQGQQAGVVDVGVVLLQFFQVAAGAEQEHAAVPVVAA
GGDELAGAGFVGFLDEALHPADAFRQLRIGARADVAVTGLGAAGGNAEEHHLALFGGVGGQRQGLLEGALVL
DHVVGGKDQQQFVAAFGDQFHRGDGHRRRRVAAEGFEQDRLARQVLRLQLFLDDEAVLLVAHQQRRLHAVEG
QALDGLLEQGVVAGEGEELLGVLLAGKRPESRAAATGKDYWDHVVSP*
AnnotationID:6377GeneID:6376
AnnotatorUID: diggins
Modification Date/Time: 2005-04-20 04:04:13
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16160
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29859
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49378How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3375257Stop: 3373818
Length: 1440
Start Codon: TTGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
TTGCAGGGCCGGTTCTGCGGTGCGCCCGTAGACGTCTTCCAGGCGCTCGATGTCGTCCTCGCCGAGGTAGCT
GCCGGACTGCACCTCGATGATCTCCAGCGGGATCTTGCCGGGGTTGGCCAGGCGGTGCACGGAGGCGATCGG
GATGTAGGTCGACTGGTTCTCGGTGAGCAGGAAGGTCTTGTCGTCGCAGGTCACCTGGGCGGTCCCGGAAAC
CACGATCCAGTGCTCGGCGCGGTGGTGGTGCATCTGCAGCGAGAGGCGCGCGCCGGGCTTCACGGTGATGTG
CTTGACCTGGAAGCGGCCGCCCATGTCCACCGAGTCGTAGGAGCCCCACGGGCGGTAGACCTCGCAGTGGTT
CTGGGTCTCGCTACGGCCCTGGGCGTCGAGGTCCTTGACCACGTGCTTGACGTCCTGCACCCGGTCCTTGTG
GGCGATCATCATGGCGTCCTTGGTTTCCACCACCACGATGTCCTCCAGGCCGATCACCGAGACCAGCTTGCC
GTTGCCGTGCACCAGGCAGTTGTGGCTGTCGTGGACCAGCACGTCGCCCTTGGTGACGTTGCCGTTGGCGTC
CTTGGCGTGCACGTCCCAGATCGACGACCAGCTGCCGACGTCGTTCCAGCCGGCGGACAGCGGCACCACGCA
GGCGCGCGAGGTCTTCTCCATCACCGCGTAGTCGATGGAGTTGTCCGGGCAGCATTCGAAGGTGGCGGCGTC
GATGTTCACCAGGTCGCCGTCGTGCTGGCTGCGCTCCAGGGCCAGCAGGCAGGTGTCGTAGATGTCGGCGTC
GTGCTTCTTCAGTTCTTCCAGGTAGCGGCTGGCGCGGAACAGGAACATGCCGCTGTTCCAGTAGTAGCCGCC
GGCGGCGACGAACTCGCGGGCGCGGGCTTCGTCGGGTTTCTCGACGAAGCTCTGCACCCGGCTGACGCCTTC
CGGCAGTTGCGCATCGGCGCTCGCGCGGATGTAGCCGTAACCGGTCTCGGGGCGGCTGGCGGGAATGCCGAA
GAGCACCATCTCGCCCTTTTCGGCGGCGTTGGTGGCCAGCGCCAGGGCCTGCTGGAAGGCGCGCTGGTCCTC
GATCACGTGGTCGGCGGGAAGGATCAGCAGCAGTTCGTCGCGGCCTTCGGCGACCAGTTTCATCGCGGCGAT
GGCCACCGCCGGCGCCGTGTTGCGGCCGAAGGGTTCGAGCAGGATCGCCTGGCTCGCCAGGTTCTGCGCCTC
CAGCTGTTCCTGGACGATGAAGCGGTGCTCCTTGTTGCACACCAGCAGCGGCGCCTGCATGCCGTCGAAGGC
CAGGCGCTTGATGGTCTGCTGGAACAGGGTGTCGTCGCCGGTGAGGGCGAGGAACTGCTTGGGGTACTGCTT
GCGGGAAAGAGGCCAGAGTCGCGAGCCGCTGCCACCGGAAAGGATTACTGGGATCATGTTGTTTCTCCTTGA