ViewGene

Locus Name:
GeneID:
Location:

GeneID:6371
TrivialName: PA14_18490
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_18490
PAO1 Ortholog Locus:
Sequence Length:2667
Protein Length:888
Start: 1585609
Stop: 1588275
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 244/919 (26%), Positives = 329/919 (35%), Gaps = 228/919 (24%)
Sequence:
GTGGAATTCCTCGCTGGTCATGTACGCCAGCAGCGAACTGTCGAAGCCGCCGCCGGACACCGCGTTGTTGAG
GATGTCGGCGCCGCTGAACTCCTCCAGGAAGCCGGCGAAGTTGTAGGCCGGGCCGCTGTTGGAGGTGCCGAC
CAGGGCAATCTGCGGGTTGCCGCCGTCGCCGAACAGGTCGCCGCTGTCGCTGGCGCCCACCGGCTCGGTCTC
GAAGCGGTCGACGTACTGGGTGGCGTAGCTGTTGCCGCAGAGTTGCGCGGCGGCCTTGTGGAAGGTGCCGAG
CTTGGACAGCAGGCCGACGCGCTTGCTTTCGAACTGCTTCTTGGGGATCTCCTCGAAGCCGGGCACCTGCTT
CAGCGTCTCGGCCACGATCTTCGCGCTGCGCCGGGCGCCATGGGGAGTCCAGTGGTGGTCGCCCTTGAAGTA
GTAGGCGTGCTCCTCCTTCTCGTCGAACAGCGGCGAGAAGTCCGGGGTCCAGATGCCGGCCTGGCGGAAGCG
GGCGATGGTCGCCAGGTAGTTCTTCTTCGCCAGCTCGTAGTCGAAGCCGGCCTTTTCCGCCGGGCTGAGCTT
CTCGCGGTTCACCAGGCCGCGGGTTGGCTGGTAGACCACCACCAGCTCGATGCCCTTGCGCTTGAGTTCGTC
GCGCAGTGCGCGGAGTTCGCGCCAGCCTTCGGCGCTGGTGCCGAAGTCGGTACGCAGGTCGTAGGTGGTGCG
GAACAGCCAGTCATCCTGGGCCTGCACCAGGTGGGTGAAGAAGCCCAGGTACTTGGTGTTGTAGCGCGAGTC
GTCGGCGGCGGCCGGGCACAGGTTGCCGGCCGGCAGCGCCTGGTAGCTCGGCGCCGCGCCGGGGTCGGCGGC
GAGGGCTGCCTGGGCCAGGCAGAGGCCGGCGGCCAGGGCGCTCAGGCGGAACAGTCGGGAAGTGCGGGTTTT
CATGCGTCTGGGTCCTCAGTCCTGGAGTTCGGCCTGGCTTTCCACGGGATCGATCAGCACCGCCTTGTCCTG
GCGCACCAGCAGGTCGAGGATCTGGTCCTGCTTCTCGCCGAGAACGCCGGGCAGGCTGATGCCGGAGGATTT
GGTCGGGGCGAGCATCGCCACCCGGTACAGTTCGAGGCTCAGCGGCGAATCCACCGAGAGCGGGCCGGAGCC
GTTGCCGGCGAGCTTGCCGCCGACCACGATCAGCGAGACCTTGGTGTCGAACGGGTCGAGGGCGATGTTGCG
GTCGGTGTTGGTGAGGTCCTTGATGTGGCCGTACACGCCGATCAGCTGGTTGCCCGCCGCGAGGTTTTCGTA
GAGGCGGATGTTCACGCTGTTGCGCACGCGGATGCCGTGGCGGCGGTTGGCCAGGACCTGGTTGCCCCAGAG
CAGGTTGTCGCCGCTCTCGTAGAGGGTGATGCCGTCGGAATGGTTGCGGTAGACCTCGTTGTAGGCCACCAG
GTTGCCCTCGCTGTTACGGTCGAGGACGATCCCGGAAAGCTTGTTCTCGTAGCTGCGGTTGTTGAAGATGAA
GCTGTCGTTGACTTCCCGCGAGACGATGATGCCGTGCTTCTTCCTGGTCCCGTGGACGGTGTTGTCGGCGAT
GATCAGGCGGTGCGAACGGTCGTGCGGGTCGATGCCGTAGACGATGTTGTCGCGGTAGGTGTTGCCCTTCAC
CACCAGGTCGTCGGCCTCGTAGCAATAGAAGCCGTACCAGCTGTCGACGATGGTCGAGTCGATCACCCAGCC
CTTGGGGCGCGGGCGCTTCATCTGCTTGTCCATGCCCGGGCTGTACTGCGAGATGGAGATGCCGTAGGCCTT
GGAGGCGTTGTAGCCGAAGCTGGTGAAGGTGCTGTTGCTCAGGTACACCTCGGCGCCGCCCCAGGAGATCAG
GAACGGACGGAACTCGTTGGGCGTCTTGAACCAGGCCGGCTCCTTCTTCGATTCGCTCCAGCCGGTGACCTT
GCTGTCGCGGACGAACAGCATGCCGTCGTTGACCAGGAACGCGCCGCGCTCCTGGGACAGGCGCAGTTCCTT
GACCTGCTTGTCGATGTCGAGGGTCGCGCCCTGGCTGACCACGATCGGCAGGCGGGCGACGAACACCCCCGG
CTCGACCTGTTCCAGCGCGCTGGCGGGAAGCTTGCCGGCGAGCTGGGCGAGGTTCACGTAGCCGCCTTCGAT
GAAGATCGCCTGGGGCATCTGGCGCTGGCGCTTGACCCATTCGGAGAGGCGGTTGCTGCCACCGGTGAACTC
CTTCAGCGGCTGCTGCTGGACCATCCGCTGCACGCTGGCGCGGCCACCCGGCTTGCGCACGATCTTGGCTTC
CACCGCGGCGGCGGTGTAGCCGGAGAGGTCGGGCAGTTTCGGCGGGTCCAGGTGCAACGGTTCGGCCGGCGC
GGTGGTCACCGTGTAGTTGCCGGTTTCCTTCAGGCCCTGGGTCAGGCCCGGCTCGTTGCCGGCCTGCGCCGG
GACCGGCTGCGGTTTCTCCACCGGCTGCGCCGCCCACGCCTGGCCGTGCAGCAGCACCGCGCCGAGCACTGC
CGCGGCCAGCGGGCGCAGGCGCGGGAGCCGGCGGCGGGGGATCGAAAGGGAAATGTCGGGCATGTCCGGTTT
CCTCGCGGGGCTCAGAAGCGCCAGATGAAGTCGACGAAGGCGCGGTGCATGGTCGAGTCGGTGCCCGGCCCG
TAG
Translation:
MEFLAGHVRQQRTVEAAAGHRVVEDVGAAELLQEAGEVVGRAAVGGADQGNLRVAAVAEQVAAVAGAHRLGL
EAVDVLGGVAVAAELRGGLVEGAELGQQADALAFELLLGDLLEAGHLLQRLGHDLRAAPGAMGSPVVVALEV
VGVLLLLVEQRREVRGPDAGLAEAGDGRQVVLLRQLVVEAGLFRRAELLAVHQAAGWLVDHHQLDALALEFV
AQCAEFAPAFGAGAEVGTQVVGGAEQPVILGLHQVGEEAQVLGVVARVVGGGRAQVAGRQRLVARRRAGVGG
EGCLGQAEAGGQGAQAEQSGSAGFHASGSSVLEFGLAFHGIDQHRLVLAHQQVEDLVLLLAENAGQADAGGF
GRGEHRHPVQFEAQRRIHRERAGAVAGELAADHDQRDLGVERVEGDVAVGVGEVLDVAVHADQLVARREVFV
EADVHAVAHADAVAAVGQDLVAPEQVVAALVEGDAVGMVAVDLVVGHQVALAVTVEDDPGKLVLVAAVVEDE
AVVDFPRDDDAVLLPGPVDGVVGDDQAVRTVVRVDAVDDVVAVGVALHHQVVGLVAIEAVPAVDDGRVDHPA
LGARALHLLVHARAVLRDGDAVGLGGVVAEAGEGAVAQVHLGAAPGDQERTELVGRLEPGRLLLRFAPAGDL
AVADEQHAVVDQERAALLGQAQFLDLLVDVEGRALADHDRQAGDEHPRLDLFQRAGGKLAGELGEVHVAAFD
EDRLGHLALALDPFGEAVAATGELLQRLLLDHPLHAGAATRLAHDLGFHRGGGVAGEVGQFRRVQVQRFGRR
GGHRVVAGFLQALGQARLVAGLRRDRLRFLHRLRRPRLAVQQHRAEHCRGQRAQAREPAAGDRKGNVGHVRF
PRGAQKRQMKSTKARCMVESVPGP*
AnnotationID:6372GeneID:6371
AnnotatorUID: diggins
Modification Date/Time: 2005-04-19 20:08:30
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:16154
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29850
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49373How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3368326Stop: 3365660
Length: 2667
Start Codon: GTGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
GTGGAATTCCTCGCTGGTCATGTACGCCAGCAGCGAACTGTCGAAGCCGCCGCCGGACACCGCGTTGTTGAG
GATGTCGGCGCCGCTGAACTCCTCCAGGAAGCCGGCGAAGTTGTAGGCCGGGCCGCTGTTGGAGGTGCCGAC
CAGGGCAATCTGCGGGTTGCCGCCGTCGCCGAACAGGTCGCCGCTGTCGCTGGCGCCCACCGGCTCGGTCTC
GAAGCGGTCGACGTACTGGGTGGCGTAGCTGTTGCCGCAGAGTTGCGCGGCGGCCTTGTGGAAGGTGCCGAG
CTTGGACAGCAGGCCGACGCGCTTGCTTTCGAACTGCTTCTTGGGGATCTCCTCGAAGCCGGGCACCTGCTT
CAGCGTCTCGGCCACGATCTTCGCGCTGCGCCGGGCGCCATGGGGAGTCCAGTGGTGGTCGCCCTTGAAGTA
GTAGGCGTGCTCCTCCTTCTCGTCGAACAGCGGCGAGAAGTCCGGGGTCCAGATGCCGGCCTGGCGGAAGCG
GGCGATGGTCGCCAGGTAGTTCTTCTTCGCCAGCTCGTAGTCGAAGCCGGCCTTTTCCGCCGGGCTGAGCTT
CTCGCGGTTCACCAGGCCGCGGGTTGGCTGGTAGACCACCACCAGCTCGATGCCCTTGCGCTTGAGTTCGTC
GCGCAGTGCGCGGAGTTCGCGCCAGCCTTCGGCGCTGGTGCCGAAGTCGGTACGCAGGTCGTAGGTGGTGCG
GAACAGCCAGTCATCCTGGGCCTGCACCAGGTGGGTGAAGAAGCCCAGGTACTTGGTGTTGTAGCGCGAGTC
GTCGGCGGCGGCCGGGCACAGGTTGCCGGCCGGCAGCGCCTGGTAGCTCGGCGCCGCGCCGGGGTCGGCGGC
GAGGGCTGCCTGGGCCAGGCAGAGGCCGGCGGCCAGGGCGCTCAGGCGGAACAGTCGGGAAGTGCGGGTTTT
CATGCGTCTGGGTCCTCAGTCCTGGAGTTCGGCCTGGCTTTCCACGGGATCGATCAGCACCGCCTTGTCCTG
GCGCACCAGCAGGTCGAGGATCTGGTCCTGCTTCTCGCCGAGAACGCCGGGCAGGCTGATGCCGGAGGATTT
GGTCGGGGCGAGCATCGCCACCCGGTACAGTTCGAGGCTCAGCGGCGAATCCACCGAGAGCGGGCCGGAGCC
GTTGCCGGCGAGCTTGCCGCCGACCACGATCAGCGAGACCTTGGTGTCGAACGGGTCGAGGGCGATGTTGCG
GTCGGTGTTGGTGAGGTCCTTGATGTGGCCGTACACGCCGATCAGCTGGTTGCCCGCCGCGAGGTTTTCGTA
GAGGCGGATGTTCACGCTGTTGCGCACGCGGATGCCGTGGCGGCGGTTGGCCAGGACCTGGTTGCCCCAGAG
CAGGTTGTCGCCGCTCTCGTAGAGGGTGATGCCGTCGGAATGGTTGCGGTAGACCTCGTTGTAGGCCACCAG
GTTGCCCTCGCTGTTACGGTCGAGGACGATCCCGGAAAGCTTGTTCTCGTAGCTGCGGTTGTTGAAGATGAA
GCTGTCGTTGACTTCCCGCGAGACGATGATGCCGTGCTTCTTCCTGGTCCCGTGGACGGTGTTGTCGGCGAT
GATCAGGCGGTGCGAACGGTCGTGCGGGTCGATGCCGTAGACGATGTTGTCGCGGTAGGTGTTGCCCTTCAC
CACCAGGTCGTCGGCCTCGTAGCAATAGAAGCCGTACCAGCTGTCGACGATGGTCGAGTCGATCACCCAGCC
CTTGGGGCGCGGGCGCTTCATCTGCTTGTCCATGCCCGGGCTGTACTGCGAGATGGAGATGCCGTAGGCCTT
GGAGGCGTTGTAGCCGAAGCTGGTGAAGGTGCTGTTGCTCAGGTACACCTCGGCGCCGCCCCAGGAGATCAG
GAACGGACGGAACTCGTTGGGCGTCTTGAACCAGGCCGGCTCCTTCTTCGATTCGCTCCAGCCGGTGACCTT
GCTGTCGCGGACGAACAGCATGCCGTCGTTGACCAGGAACGCGCCGCGCTCCTGGGACAGGCGCAGTTCCTT
GACCTGCTTGTCGATGTCGAGGGTCGCGCCCTGGCTGACCACGATCGGCAGGCGGGCGACGAACACCCCCGG
CTCGACCTGTTCCAGCGCGCTGGCGGGAAGCTTGCCGGCGAGCTGGGCGAGGTTCACGTAGCCGCCTTCGAT
GAAGATCGCCTGGGGCATCTGGCGCTGGCGCTTGACCCATTCGGAGAGGCGGTTGCTGCCACCGGTGAACTC
CTTCAGCGGCTGCTGCTGGACCATCCGCTGCACGCTGGCGCGGCCACCCGGCTTGCGCACGATCTTGGCTTC
CACCGCGGCGGCGGTGTAGCCGGAGAGGTCGGGCAGTTTCGGCGGGTCCAGGTGCAACGGTTCGGCCGGCGC
GGTGGTCACCGTGTAGTTGCCGGTTTCCTTCAGGCCCTGGGTCAGGCCCGGCTCGTTGCCGGCCTGCGCCGG
GACCGGCTGCGGTTTCTCCACCGGCTGCGCCGCCCACGCCTGGCCGTGCAGCAGCACCGCGCCGAGCACTGC
CGCGGCCAGCGGGCGCAGGCGCGGGAGCCGGCGGCGGGGGATCGAAAGGGAAATGTCGGGCATGTCCGGTTT
CCTCGCGGGGCTCAGAAGCGCCAGATGAAGTCGACGAAGGCGCGGTGCATGGTCGAGTCGGTGCCCGGCCCG
TAG