ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6360

TrivialName: PA14_19000

AnnotatorUID: danlee

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_19000

PAO1 Ortholog Locus:

Sequence Length: 1374

Protein Length: 457

Start: 1640231

Stop: 1641604

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Inactivated 2/7/06. Homology: gb|AAC46193.1| (AF002133) MAV432 [Mycobacterium avium] Identities = 59/183 (32%), Positives = 71/183 (38%), Gaps = 26/183 (14%)

Sequence:

gtggattTcctcgcctggcgGGccggtcaccaccgCgGtctggttgCCCAGCACGCGCGGTTTCGGgtgctC
CAGcGgcgGgcgGAAgaacacctCcCAGGGcgtgGcaagaAAGCGGTTGCGgtaGCCcTGCTGGAAGTCGTC
CGTGCtgGccgACGTgTCgaaGGTAACGTtctctTCCAGCAccTgCGGCTGcttgCCtTCgTGGAAGACTTC
GCTGAGCAGCCACAGGTCGTTCCACTCCGCGCGCGGGTGCTCGGCGATCTCCAGGAAGTGCCCGCTGACCAG
CAGCGGCTGGTCGCTGACCCCTTCGCCCAGGCGCCGGTCGGCGCGGTGGCGCTCCAGGGCGCGCTGGCTGAG
CAGCTTGCCGCGCTGGCGATCGACGAAGCGACCGGGGTAGTCGTAGTCCTCCAGGTCCGGCTCGGCCGGGGC
GTCGGCAGCGGGGCGGTTGCCGGCCTCCAGCAGCAGCCGCGGCTTCTCGAAGTCGTAGTCGCGGCGGGTGGT
GCGCGTGGTGCGGCTGGCCAGGCGCAGGCTGAAGCGCTTGATCACCGGTTCGTCGGCGACCAGCCCGCTGTC
GTGCACGTAGGCGGTGGGACGGCCCAGGCGGGGGAACACCGTCTGGTCGTCGCCGAACACCAGCAGGTGCGC
CTCGGCGCTGTGCCGGAAATGGAAATGGATGCCCTCTTCGGCACAGAGGCGCTGGACGAAATGCAGGTCGCT
TTCGTCGTACTGCACGCAGTATTCGCGCTCGGGATACCGGGTGCCGAGCTGGAAGCGGTAGGCGTCGGCGAG
GATGCCGTGCTCCTCGAGGACCAGGGCGACGATCTGCGGCACCGTGAGGTGCTGGAAGATCCGCTGGTTGCT
GCGCTGCGCGAGGTAGGCCAGTTGCGGCACGAGGGTGAGGCGATAGCGGGTCAGGCGCTTGCCCGCGTCGGC
CTGGGCGGCGCCGTAGACCAGGCCGTGGACGCCCTGGCCCTGCGGGGTGAAGGCGAGGAAGGCGGGTCGGTG
CATGAGCGCTTCGAGGTCGAGGCCGGCGCGCTCGCTGACCAGTTCGAGTTCGAAGCGGTAGGGCCGGCTGAT
GCCTTCGTGGCCGCTGAATTCGAGAACCTGCAGGTCGTGACGGAGGCCGTCGAGGCTGAGGCTGAAGTGGGT
CTGGTTGGCCGGGTTGAACATCCGCTGTCCCCTGTTTCTCGAAAAACCTGCACGGCTGGCGTCCCTGTTCGC
CGTGCTCGATCCGAAGTGCGTGATCGCGCGGATGCTACGTCAAAAAAACTGTGCAAATTGTTGCGCACATCG
CCGGAAAACCGCGGCGCGCCTGAGTCTCAGTACTATGAAACAAAATATGTCAGGGAAAATCCGATGGGCGCA
GACTGA

Translation:

MDFLAWRAGHHRGLVAQHARFRVLQRRAEEHLPGRGKKAVAVALLEVVRAGRRVEGNVLFQHLRLLAFVEDF
AEQPQVVPLRARVLGDLQEVPADQQRLVADPFAQAPVGAVALQGALAEQLAALAIDEATGVVVVLQVRLGRG
VGSGAVAGLQQQPRLLEVVVAAGGARGAAGQAQAEALDHRFVGDQPAVVHVGGGTAQAGEHRLVVAEHQQVR
LGAVPEMEMDALFGTEALDEMQVAFVVLHAVFALGIPGAELEAVGVGEDAVLLEDQGDDLRHREVLEDPLVA
ALREVGQLRHEGEAIAGQALARVGLGGAVDQAVDALALRGEGEEGGSVHERFEVEAGALADQFEFEAVGPAD
AFVAAEFENLQVVTEAVEAEAEVGLVGRVEHPLSPVSRKTCTAGVPVRRARSEVRDRADATSKKLCKLLRTS
PENRGAPESQYYETKYVRENPMGAD*

AnnotationID:6361 GeneID:6360

AnnotatorUID: diggins

Modification Date/Time: 2005-04-19 11:11:47

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16146

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29828