ViewGene

Locus Name:
GeneID:
Location:

GeneID:6355
TrivialName: PA14_19180
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_19180
PAO1 Ortholog Locus:
Sequence Length:1857
Protein Length:618
Start: 1657997
Stop: 1656141
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22835.1| (AE005761) hypothetical protein [Caulobacter crescentus CB15]
Identities = 89/302 (29%), Positives = 109/302 (36%), Gaps = 43/302 (14%)
Sequence:
ATGCAGGGCCTTGCCCTCGGCCTGGGCCTGCTTGGCCACGGCGACGGCGATGCGCTTGCTGACCTCGCGGAT
GTCACCCAGCGCCGGCAACACGGCGCCCTCGCCCCGGGTAACGATCGGCGAGCAGTTGGCCAGGGCGTTGGC
CGCGGCCATCAGCATGCCTTCGGTGACCCGGTTGGCCCGCGCGGCGATCACCCCCAGGCCGATGCCGGGGAA
GATATAGGCGTTGTTGCACTGGGCGATGGGAATCCGCTTGTCGCCCACCTGCACCGGTTGGAACGGGCTACC
GGTGGCGACCAGCGCCTGGCCGTCGGTCCAGTTGAGGATTTCCTGCGGAGTCGCCTCGACCCGCGAGGTCGG
GTTGGACAGCGGCATCACCAGCGGCTGCTTGCAATGGCTGTGCAGCTCGCGGATGACCTCTTCGGAAAACAG
CCCGCGCTGCCCGGAGACGCCGATCAGCACCGTCGGCCGGGCATTGCGGATCACTTCCAGCAACGCCAGGTC
GTCGCCCTGCTGGCCGCCCCAGGCACCGAGATCGGCGCGCTTCTGCGCCAGGCGGTGCTGGAAGTCAAGCAG
GTTGCTCATGTCGTCGGTGAGCAGGCCCCAGCGGTCGACCATGAAGATGCGCCGACGCGCCTGGGCCTCGTC
CAGGCCCTCCAGTTGCATGGCGGCGATGATCTGCTCGGCGATGCCGCAACCGGCGGAGCCGGCGCCGACGAA
GGTCACGGTCTGCTCGCTGAGCTTCTCGCCCTTGGCCTTGCAAGCCGCCAGCAGGGTGCCCACGGCCACCGC
GGCGGTGCCCTGGATGTCGTCGTTGAAGCAGCACAGCTCGTCCTTGTAGCGCTCCAGCAACGGCATGGCATT
GGTCTGGGCGAAGTCCTCGAATTGCAGCAGGACGTTGGGCCAGCGGCGCTTGATCGCCTGGATGAACAGGTC
GACGAACTCCTCGTACTGCGCCCCGCTCACCCGCTCGTGGCGCCAGCCCATGTACATCGGGTCGTTGAGCAG
GTCCGGGTTGTTGGTGCCCACGTCCAGCACCACCGGCAGGGTGTAGGCCGGGCTGATACCGCCGCAGGCGGT
GTACAGCGACAGCTTGCCGATCGGGATGCCCATCCCGCCGATGCCCTGGTCGCCGAGGCCGAGGATCCGCTC
GCTGTCGGTGACCACCACGATCTTCACGTTGTTCTTGGTGGCGCTGCGCAGGATGTCGTCGATCCGCTCGCG
GTCCGGGTAGGAGATGAACAGGCCGCGGTGGGTCCGATAGATCTTCGAGAACTCCTGGCAGGCCTGGCCGAC
CGTGGGGGTGTAGATGATCGGCATCATTTCTTCCAGGTGCTCCTCGAGCAGGCGGAAGAACAGGGTCTCGTT
GTTGTCCTGGATCGAGCGCAGGAAGATGTGGCGGTCCAGATCGGTGTTGCACAGGTTGTACTGGCTGTAGGC
GCGCTCGGTCTGCTCCTCGATGGTCTCGATGTTGTGCGGCAGCAGGCCCTGCAGGTTGAAATCGATGCGTTC
CTGGGTACTGAACGCGCTGCCTTTGTTCAGCAGCGGCATCTCCAGCAGCGAAGGGCCGGCATGGGGAACGTA
CAAGGGACGCTTGGCTGTTTCGGTCATATCTGGACTCGCTTCTACGGGCTTCACTCGGGTACGGGGACCACG
AACATACCCCCGGCGCAGAGGCTTTCCAAGGCCACGGCGAACAACAGGTCATTGCCGGACCCGCAAGTATCG
CCACTTGCACGGCGAAACCGGCGCGTCACATCCGGAACCGACCATTCGACGAATGGTCAGAAGGCTGGCGTC
AAAATAGGTCACAATAGCCGCCGCTTTCGTAGGGGAATACGCTGGGAACGCCGATGA
Translation:
MQGLALGLGLLGHGDGDALADLADVTQRRQHGALAPGNDRRAVGQGVGRGHQHAFGDPVGPRGDHPQADAGE
DIGVVALGDGNPLVAHLHRLERATGGDQRLAVGPVEDFLRSRLDPRGRVGQRHHQRLLAMAVQLADDLFGKQ
PALPGDADQHRRPGIADHFQQRQVVALLAAPGTEIGALLRQAVLEVKQVAHVVGEQAPAVDHEDAPTRLGLV
QALQLHGGDDLLGDAATGGAGADEGHGLLAELLALGLASRQQGAHGHRGGALDVVVEAAQLVLVALQQRHGI
GLGEVLELQQDVGPAALDRLDEQVDELLVLRPAHPLVAPAHVHRVVEQVRVVGAHVQHHRQGVGRADTAAGG
VQRQLADRDAHPADALVAEAEDPLAVGDHHDLHVVLGGAAQDVVDPLAVRVGDEQAAVGPIDLRELLAGLAD
RGGVDDRHHFFQVLLEQAEEQGLVVVLDRAQEDVAVQIGVAQVVLAVGALGLLLDGLDVVRQQALQVEIDAF
LGTERAAFVQQRHLQQRRAGMGNVQGTLGCFGHIWTRFYGLHSGTGTTNIPPAQRLSKATANNRSLPDPQVS
PLARRNRRVTSGTDHSTNGQKAGVKIGHNSRRFRRGIRWERR*
AnnotationID:6356GeneID:6355
AnnotatorUID: diggins
Modification Date/Time: 2005-04-19 10:10:01
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12532
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29818
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49357How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3295936Stop: 3297792
Length: 1857
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGCAGGGCCTTGCCCTCGGCCTGGGCCTGCTTGGCCACGGCGACGGCGATGCGCTTGCTGACCTCGCGGAT
GTCACCCAGCGCCGGCAACACGGCGCCCTCGCCCCGGGTAACGATCGGCGAGCAGTTGGCCAGGGCGTTGGC
CGCGGCCATCAGCATGCCTTCGGTGACCCGGTTGGCCCGCGCGGCGATCACCCCCAGGCCGATGCCGGGGAA
GATATAGGCGTTGTTGCACTGGGCGATGGGAATCCGCTTGTCGCCCACCTGCACCGGTTGGAACGGGCTACC
GGTGGCGACCAGCGCCTGGCCGTCGGTCCAGTTGAGGATTTCCTGCGGAGTCGCCTCGACCCGCGAGGTCGG
GTTGGACAGCGGCATCACCAGCGGCTGCTTGCAATGGCTGTGCAGCTCGCGGATGACCTCTTCGGAAAACAG
CCCGCGCTGCCCGGAGACGCCGATCAGCACCGTCGGCCGGGCATTGCGGATCACTTCCAGCAACGCCAGGTC
GTCGCCCTGCTGGCCGCCCCAGGCACCGAGATCGGCGCGCTTCTGCGCCAGGCGGTGCTGGAAGTCAAGCAG
GTTGCTCATGTCGTCGGTGAGCAGGCCCCAGCGGTCGACCATGAAGATGCGCCGACGCGCCTGGGCCTCGTC
CAGGCCCTCCAGTTGCATGGCGGCGATGATCTGCTCGGCGATGCCGCAACCGGCGGAGCCGGCGCCGACGAA
GGTCACGGTCTGCTCGCTGAGCTTCTCGCCCTTGGCCTTGCAAGCCGCCAGCAGGGTGCCCACGGCCACCGC
GGCGGTGCCCTGGATGTCGTCGTTGAAGCAGCACAGCTCGTCCTTGTAGCGCTCCAGCAACGGCATGGCATT
GGTCTGGGCGAAGTCCTCGAATTGCAGCAGGACGTTGGGCCAGCGGCGCTTGATCGCCTGGATGAACAGGTC
GACGAACTCCTCGTACTGCGCCCCGCTCACCCGCTCGTGGCGCCAGCCCATGTACATCGGGTCGTTGAGCAG
GTCCGGGTTGTTGGTGCCCACGTCCAGCACCACCGGCAGGGTGTAGGCCGGGCTGATACCGCCGCAGGCGGT
GTACAGCGACAGCTTGCCGATCGGGATGCCCATCCCGCCGATGCCCTGGTCGCCGAGGCCGAGGATCCGCTC
GCTGTCGGTGACCACCACGATCTTCACGTTGTTCTTGGTGGCGCTGCGCAGGATGTCGTCGATCCGCTCGCG
GTCCGGGTAGGAGATGAACAGGCCGCGGTGGGTCCGATAGATCTTCGAGAACTCCTGGCAGGCCTGGCCGAC
CGTGGGGGTGTAGATGATCGGCATCATTTCTTCCAGGTGCTCCTCGAGCAGGCGGAAGAACAGGGTCTCGTT
GTTGTCCTGGATCGAGCGCAGGAAGATGTGGCGGTCCAGATCGGTGTTGCACAGGTTGTACTGGCTGTAGGC
GCGCTCGGTCTGCTCCTCGATGGTCTCGATGTTGTGCGGCAGCAGGCCCTGCAGGTTGAAATCGATGCGTTC
CTGGGTACTGAACGCGCTGCCTTTGTTCAGCAGCGGCATCTCCAGCAGCGAAGGGCCGGCATGGGGAACGTA
CAAGGGACGCTTGGCTGTTTCGGTCATATCTGGACTCGCTTCTACGGGCTTCACTCGGGTACGGGGACCACG
AACATACCCCCGGCGCAGAGGCTTTCCAAGGCCACGGCGAACAACAGGTCATTGCCGGACCCGCAAGTATCG
CCACTTGCACGGCGAAACCGGCGCGTCACATCCGGAACCGACCATTCGACGAATGGTCAGAAGGCTGGCGTC
AAAATAGGTCACAATAGCCGCCGCTTTCGTAGGGGAATACGCTGGGAACGCCGATGA