ViewGene
Locus Name:
GeneID:
Location:

GeneID:6353
TrivialName: PA14_19220
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_19220
PAO1 Ortholog Locus:
Sequence Length:684
Protein Length:227
Start: 1658661
Stop: 1659344
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGCGGGTCGTCCTCGGCGATCACCTGGTAGCGCATCTGTACGATGCCGCTGTTGTAGCCATGTTGTTCCAG
CAGTTGCAGGCGCCGCTCGCGGCCGCCGGCGAACAGCGGGATGCCGGCGCCGAGCAGCTGCGGAATGACGCT
GACGATCACCTCGTCGAGCAGCCCGGCCGCCAGGCAACTACCGGCCAGGCTGCCGCCGCCGGCCAGCCAGAT
CCGCCGGCAGCCCTGTTCGCCGAGGCGCGCGAGGCCTTCCTGGGGTGTGACGTGGCGCAACTCGACGCCTTC
CGCTGCGCTTTCCTGCGGGTTGCGGGTGAGTACCTGGCAGGGTTTGCCCGGATACGGCCAGTCGCCGAAGCC
GCGCACGATATCGTAGGTGCCGCGGCCCATCAGCAGGCCGTCGATGCCCTGGTAGAAGCTCTTGTAGCCGTG
GTCGTTGCCGCCCTCGGCGAAACGGTCGAGCCAGTCGACGCTGCCGTCGGGGCGGGCGATGAAACCGTCCAG
GCTGGCGGCGACGTAGTAGGTCAGGTGCGGTTTCATGGACGGTTTTCCTCGGTTCAGGCGGTGGCTTCGTCG
CTGCGGCTCGGCGCGGCCAGCGCCTCGAACGAGCGGGCCCCGGCGTCACGCCCTTCGAGCATGCCTTGCAGC
CCCTGGCGCAGGTCCTGGCCGCTGGGCTGCTGGTAG
Translation:
MRVVLGDHLVAHLYDAAVVAMLFQQLQAPLAAAGEQRDAGAEQLRNDADDHLVEQPGRQATTGQAAAAGQPD
PPAALFAEAREAFLGCDVAQLDAFRCAFLRVAGEYLAGFARIRPVAEAAHDIVGAAAHQQAVDALVEALVAV
VVAALGETVEPVDAAVGAGDETVQAGGDVVGQVRFHGRFSSVQAVASSLRLGAASASNERAPASRPSSMPCS
PWRRSWPLGCW*
AnnotationID:6354GeneID:6353
AnnotatorUID: diggins
Modification Date/Time: 2005-04-19 09:09:15
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16142




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29814




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49355How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3295271Stop: 3294588

          
Length: 684


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGCGGGTCGTCCTCGGCGATCACCTGGTAGCGCATCTGTACGATGCCGCTGTTGTAGCCATGTTGTTCCAG 
CAGTTGCAGGCGCCGCTCGCGGCCGCCGGCGAACAGCGGGATGCCGGCGCCGAGCAGCTGCGGAATGACGCT 
GACGATCACCTCGTCGAGCAGCCCGGCCGCCAGGCAACTACCGGCCAGGCTGCCGCCGCCGGCCAGCCAGAT 
CCGCCGGCAGCCCTGTTCGCCGAGGCGCGCGAGGCCTTCCTGGGGTGTGACGTGGCGCAACTCGACGCCTTC 
CGCTGCGCTTTCCTGCGGGTTGCGGGTGAGTACCTGGCAGGGTTTGCCCGGATACGGCCAGTCGCCGAAGCC 
GCGCACGATATCGTAGGTGCCGCGGCCCATCAGCAGGCCGTCGATGCCCTGGTAGAAGCTCTTGTAGCCGTG 
GTCGTTGCCGCCCTCGGCGAAACGGTCGAGCCAGTCGACGCTGCCGTCGGGGCGGGCGATGAAACCGTCCAG 
GCTGGCGGCGACGTAGTAGGTCAGGTGCGGTTTCATGGACGGTTTTCCTCGGTTCAGGCGGTGGCTTCGTCG 
CTGCGGCTCGGCGCGGCCAGCGCCTCGAACGAGCGGGCCCCGGCGTCACGCCCTTCGAGCATGCCTTGCAGC 
CCCTGGCGCAGGTCCTGGCCGCTGGGCTGCTGGTAG