ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6352

TrivialName: PA14_19250

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_19250

PAO1 Ortholog Locus:

Sequence Length: 1632

Protein Length: 543

Start: 1659302

Stop: 1660933

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAE38603.1| (BX640433) ribonuclease E [Bordetella parapertussis] Identities = 81/360 (22%), Positives = 126/360 (35%), Gaps = 61/360 (16%)

Sequence:

TTGCAGCCCCTGGCGCAGGTCCTGGCCGCTGGGCTGCTGGTAGGCGCCGAGGCCGAACTCCGGCATCACCGC
CAGCAGGTAGTCGAACACGTCGCCCTGGATGCGCTCGTAGTCGACCCAGGCGGTGGTGCGGGTGAAGCAGTA
TATCTCCAGCGGGATGCCCTGGGCTGTCGGCTGCAACTGGCGGACCATGCAGGTCATGTGCGGATGGATGTC
CGGGTGGTTCTGCAGGTAGGCGAGGGCGTAGGCGCGGAACGTACCGATGTTGGTCAGCCGGCGGCGGTTGGC
GGCCAGCGGGGCGACCCCGCCGTTGGCGGCATTCCACTCCTGCAACTCGGTCTGCTTGCGGGCCATGTATTC
GGTGAGCAGGCGCACCTGGCTCAGGCGCCGCTCTTCCTTCTCGTCGAGGAAACGCACCTGGCTGGAGTCGAC
GTAGATTGCCCGCTTGATCCGCCGTCCGCCGGACTGCTGCATGCCGCGCCAGTTCTTGAACGACTCCGACAT
CAGGCGCCAGGTCGGCACCGAGACGATGGTCTTGTCGAAGTTCTGCACCTTCACGGTGTACAGGGTGATGTC
CACCACGTCGCCGTCGGCGCCGACCTGCGGCATCTCGATCCAGTCGCCGACCCGCAGCATGTCGTTGCTGGT
GAGCTGCACGCTGGCGACGAAGGACATCAGGGTGTCCTTGTAGACCAGCAGGAGGACCGCCGACATCGCGCC
GAGGCCGGACAGCAGCAGGAGCGGCGAGCGGTCGATGATGATCGAGACGATGATGATCGCGCCGAACACGAA
CACGGCGATCTTCGCCAGTTGCACGTAGCCCTTGATCGAACGGGTGCGGGCATGCTCGGTACGCGCGTAGAT
GTCCAGCAGGGCATTCAGCAGCGCGGTGAGGGCGAGGATCAGGAACAGCACGGTGAAGGCCAGTGCCAGGTT
GCCGAGGAAGTGCGCGGCCTTGTCCGGCATCTCCGGGATCCATGGCAGGCCGAATTGCACCAGCAGCGAGGG
CGTGGTCTGTGCCAGGCGCTGGAACACCTTGTTGCGGATCAGGTCGCCGAGCCAGTGCAGCGCGGGCTGGCG
GGCGAGCAGGTTGGCGGCGTAGAGGACGATGTAGCGGGCCACCCGGCCGAGAATCAGGGCGCCCACCAGCAG
CAGGCCGAAGGCCAGGCCGGCGTGCAGGATAGGGTGTTGGTCGAGCGCCGACCAGTACCCGGAGAGCTGGTC
GAGAAGGGATGTGGAGTCCATGGACAGGCGACTTCCTTTGTTGCGGGCGGGGGGGACGGGCCGGCCCCGCGG
TTGAACGGAGATCCCGACGCGGGGGCCGGGAACGCACAAAGGAACCAAGAGTGCCCCATCGGGCGCCGGATC
GCATCCCCGACGTGTCTACAAAGGTTTTCCGCCGACGCGCGGGCTCAGCCGGCAAGCTCCTCCAGGGTGCGC
CCGCGGGTCTCGATGCCGAAGGCCCAGACCACCAGGGCGGCGACGCCGAAACAGAGGGCGCCGAGGGTGAAC
ACCCCGCCCTGGCCGGTGAGCGGCAGGACCAGCCCGGTGACCAGCGGGCCGAGCAGCGAGCCGATTCGCCCG
ACCGCCGAGGCGAAGCCCGAGCCGGTGGCGCGCGCGGAGGTCGGATAG

Translation:

MQPLAQVLAAGLLVGAEAELRHHRQQVVEHVALDALVVDPGGGAGEAVYLQRDALGCRLQLADHAGHVRMDV
RVVLQVGEGVGAERTDVGQPAAVGGQRGDPAVGGIPLLQLGLLAGHVFGEQAHLAQAPLFLLVEETHLAGVD
VDCPLDPPSAGLLHAAPVLERLRHQAPGRHRDDGLVEVLHLHGVQGDVHHVAVGADLRHLDPVADPQHVVAG
ELHAGDEGHQGVLVDQQEDRRHRAEAGQQQERRAVDDDRDDDDRAEHEHGDLRQLHVALDRTGAGMLGTRVD
VQQGIQQRGEGEDQEQHGEGQCQVAEEVRGLVRHLRDPWQAELHQQRGRGLCQALEHLVADQVAEPVQRGLA
GEQVGGVEDDVAGHPAENQGAHQQQAEGQAGVQDRVLVERRPVPGELVEKGCGVHGQATSFVAGGGDGPAPR
LNGDPDAGAGNAQRNQECPIGRRIASPTCLQRFSADARAQPASSSRVRPRVSMPKAQTTRAATPKQRAPRVN
TPPWPVSGRTSPVTSGPSSEPIRPTAEAKPEPVARAEVG*

AnnotationID:6353 GeneID:6352

AnnotatorUID: diggins

Modification Date/Time: 2005-04-19 09:09:06

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16141

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29812