ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6348

TrivialName: PA14_19420

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_19420

PAO1 Ortholog Locus:

Sequence Length: 1725

Protein Length: 574

Start: 1681895

Stop: 1680171

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAG30261.1|AF307334_7 (AF307334) unknown [Ectothiorhodospira shaposhnikovii] Identities = 101/330 (30%), Positives = 142/330 (43%), Gaps = 23/330 (6%)

Sequence:

GTGCATCGACGGCGCTCAGCGGGTCGTCGACGAACGGCGAGTTGGGCTCGGTGGACATCGCTACATCCCTAT
GCAAGGAAAAAGGCGCCTAGCCTAGCGCGAGTCGCCGGGGATGGCACGGAGCGTCATGTAAATAAAACCCAT
GAGGCGAGCCCCGACCTGCGGGGCCCGCCGTCGCGCACGGGCTCAGCGTACGGCTTCGAACAGCCCGCTGGC
GCCCATGCCGCCGCCGACGCACATGGTCACCACGCCGTAGCGCAGGTTGCGCCGGCGCAGTTCGCGGACCAG
ATGACCGACCTGGCGCGAGCCGGTCATGCCGAACGGGTGGCCGATGGCGATGGAGCCGCCATTGACGTTGTA
CTTCTCGTTGTCGATCTCCAGCCGGTCGCGGCAGTACAGGCACTGCGAGGCGAAGGCTTCGTTGAGTTCCCA
GAGATCGACGTCGGCGATCTTCAGCCCCTTCGCCTTGAGCAGCTTCGGCACCGAGAACACCGGACCGATGCC
CATTTCGTCCGGCTCGCAGCCGGCCACGGTGAAGCCACGGAAGAAGGCCTTCGGCTCCAGGCCCAGCGCCAG
CGCTTTCTCCAGGCTCATCAGCAGGGTCATCGAGGCGCCGTCGGAGAGTTGCGAGGCGTTGCCGGCGGTGAC
CGAACCGTCCTCGGCGAACGCCGGCTTCAGCGAGGCCAGGCCTTCGAGGGTGGTGTCCGGGCGGTTGCAGTC
GTCGCGGTCGACCACTCCGTCGAGCACCTGCTTCTCGCCGCTGGCCTTGTCCTCCACCGCGTAGCGGGTGGT
CATCGGCACGATCTCGTCGGCGAACAGCCCGTCCGCCTGGGCTCGCGCCATCCGCTGCTGGCTCTGCAGGGC
GTAGGCATCCTGGGCCTCGCGGGTGATGCCGTAGCGACGGGCGACGATCTCGGCGGTCTGCCCCATGGGGTA
GTAGATGCCCGGCACCTCCCTTTGCAGCAGCGGGTTCACCAGGTGGTCGGTGTTGACGCTCTTCAGGGTCAG
GGTGATCGACTCGACGCCGCCGGCGACGATCACCTCGCTGCAACCGGAAGCGATCTGGTTGGCGGCGATGGC
GATCGCCTGCAGGCCGGAGGAACAGTAGCGGTTGAGGGTCATCCCCGGCACCTGGATGCCGAGGCCGGAGAG
CACCGCCACGTTGCGCCCGATGTTGTGGCCCTGGGCGCCTTCGTTGGAGCCGGCGCCGACGATGCAGTCATC
CACCAGCAGCGGGTCGAGGTCGTTGCGCGCCAGCAGCGCGTCGACACAGTGGGCGGCCATGTCGTCCGGCCG
GGTCAGGTTGAACTTGCCGCGGAAGGACTTGGCCAGGCCGGTCCGGACGCTGTCGACGATCACCACTTCACG
CATGGGGGAACCCTCGCTGTTATTGTCGGGCGGCCGCCGGGGCAGCGGCCGGATCGAGCGAGGATAAGGCGA
GGCAATCGCGCGAGGCACCGATCATTCATCCGGCGTATGCGTCGCCATCCCCTGGAGAGGACGGCGCCGCAT
TCCGGCAGGCCTCACTTGTCCTTCTTGTACGCCGCCTCGATGGCGTCGTTGATGGTGCGCAGCACCTTGACC
CGGGCGAAGCGCTTGTCGTTGGCTTCGACCAGGGTCCAGGGCGCGATCTCGGTGCTGGTACGGTCGACCATG
TCGCCCACCGCGTCCACGTACTGGTCCCACTTGTCGCGGTTGCGCCAGTCTTCCTCGGTGATCTTGTAG

Translation:

MHRRRSAGRRRTASWARWTSLHPYARKKAPSLARVAGDGTERHVNKTHEASPDLRGPPSRTGSAYGFEQPAG
AHAAADAHGHHAVAQVAPAQFADQMTDLARAGHAERVADGDGAAIDVVLLVVDLQPVAAVQALRGEGFVEFP
EIDVGDLQPLRLEQLRHREHRTDAHFVRLAAGHGEATEEGLRLQAQRQRFLQAHQQGHRGAVGELRGVAGGD
RTVLGERRLQRGQAFEGGVRAVAVVAVDHSVEHLLLAAGLVLHRVAGGHRHDLVGEQPVRLGSRHPLLALQG
VGILGLAGDAVATGDDLGGLPHGVVDARHLPLQQRVHQVVGVDALQGQGDRLDAAGDDHLAATGSDLVGGDG
DRLQAGGTVAVEGHPRHLDAEAGEHRHVAPDVVALGAFVGAGADDAVIHQQRVEVVARQQRVDTVGGHVVRP
GQVELAAEGLGQAGPDAVDDHHFTHGGTLAVIVGRPPGQRPDRARIRRGNRARHRSFIRRMRRHPLERTAPH
SGRPHLSFLYAASMASLMVRSTLTRAKRLSLASTRVQGAISVLVRSTMSPTASTYWSHLSRLRQSSSVIL*

AnnotationID:6349 GeneID:6348

AnnotatorUID: diggins

Modification Date/Time: 2005-04-18 19:07:45

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16137

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29804