ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6343

TrivialName: PA14_19780

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_19780

PAO1 Ortholog Locus:

Sequence Length: 1425

Protein Length: 474

Start: 1706481

Stop: 1705057

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAK53449.1| (AY032926) unknown [Streptomyces aureofaciens] Identities = 129/467 (27%), Positives = 151/467 (32%), Gaps = 135/467 (28%)

Sequence:

ATGCAGGATGGATACGCCGTCATCCAGTGCATGGATGACGGCGCGGCACTGTTCCGCCGGCGGCGGCGATGG
CATCCTTCGCTGCATGCAGCCCGAACAGACCATTCCCGCCGACCGCGACCTCGCCGACGCCACCCGCGAGAC
GGTCATGCGCTACCACCTCAGTTGGAAGCACCGCGACATCGACGCGGTGATGGCGCTCTATCATCCCGAGGT
CGAATACAACGACTTCTTCCAGAACCGCCGGATGCGCCTGGCCGATCTTCGCGAGTACGTCGAGGCGACCAT
GCCCAAGGGCCCCGACGAGTCGCTGGAGCACACCGACCGTATCCGCTTCGACGGCGATACCGCCTTCATCCA
GTACCGCCTGCGGGTGACCCTCAGCGGCCGCCTGGCTTCGTTCCGCGCCAGCGAGGCGATCACCGTGCGCGA
CGGCCTGATCTGGCGCATCAACGAATACGCCTCGCTGGTCCACGAAAGCGGCGGCGGAGCCCAGGCCGGCGG
CGACGGCCGGCCGCCGGCCAGCCGCCTGGGGCTTTCGGCCAAGCAGCTGAGCCTGCTGGCGCGCGACCTGGA
GCACTACTTCCAGCAGGCCCAGCCCTATCTCGATCCGGACCTGGACCTGACCCAGGTGGCCAACGCCACCGG
TTATACGCGCAACCAGATTTCCTACCTGCTCAACCAGGTGCTCGGCCTGAGCTTCTACCAGTACGTCAACCA
GACCCGCCTGCAACACCTGCTCGGCCAGCTTTCCGGCGAGCTGCCCGGACGGGTCGACGAACTGGCCTTCGC
CGCCGGCTTCAATTCGCTGTCGGCCTTCTACCGCTGCTTCCGCCAGCACACCGGCCAGTCTCCGCGCGAATA
CCTGAAGCGCCTGTCGTCGCGCCGCTGAGATTTCCCAGCGGACCCGCGCGCACGACAGGCGCACGGCATCTT
CCTACTCTCGCCGCATTCCCCCTTCCCTCTCGCGATGGAGCCCTCTATGTCGGCCTGGCGCCACCTCAGCCT
GTGGATGAATCAACTGGACGATCCGCTCGAAGCGCGCCCGTCCCTGGAAGAATCCCTCGAGGTCGACGTGGC
CATCGTCGGCGCCGGCTACACCGGCCTCTGGACCGCCTATTACCTGAAGCGCCGGGCGCCGCAGTTGCGCGT
CGCCATCGTCGAGGCGGAAACCGCCGGCTTCGGCGCCTCGGGGCGCAACGGCGGCTGGCTGATGGGCAACCT
GCTCGGCGAGGACGGCCTGCTCGCCGGCTTGCCGCCGGAACGGCGCCGGGCCGGCTACGACCTGCTGCACGG
GATTCCCGACGAGGTCGCGCGGGTGCTGCAAGAGGAAGGCATCGACTGCGACTACCGCAAGGGCGGCGTGCT
CTACTGCGCGGCGCGCTACCCGGAACAGGAACGCCGCCTGCGCGCCTATCTGCATGA

Translation:

MQDGYAVIQCMDDGAALFRRRRRWHPSLHAARTDHSRRPRPRRRHPRDGHALPPQLEAPRHRRGDGALSSRG
RIQRLLPEPPDAPGRSSRVRRGDHAQGPRRVAGAHRPYPLRRRYRLHPVPPAGDPQRPPGFVPRQRGDHRAR
RPDLAHQRIRLAGPRKRRRSPGRRRRPAAGQPPGAFGQAAEPAGARPGALLPAGPALSRSGPGPDPGGQRHR
LYAQPDFLPAQPGARPELLPVRQPDPPATPARPAFRRAARTGRRTGLRRRLQFAVGLLPLLPPAHRPVSARI
PEAPVVAPLRFPSGPARTTGARHLPTLAAFPLPSRDGALYVGLAPPQPVDESTGRSARSAPVPGRIPRGRRG
HRRRRLHRPLDRLLPEAPGAAVARRHRRGGNRRLRRLGAQRRLADGQPARRGRPARRLAAGTAPGRLRPAAR
DSRRGRAGAARGRHRLRLPQGRRALLRGALPGTGTPPARLSA*

AnnotationID:6344 GeneID:6343

AnnotatorUID: diggins

Modification Date/Time: 2005-04-18 17:05:04

Gene Name:

Confidence Code: 4

GeneProduct: conserved hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12511

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29795