ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6326

TrivialName: PA14_20660

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_20660

PAO1 Ortholog Locus:

Sequence Length: 2454

Protein Length: 817

Start: 1781749

Stop: 1779296

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: gb|AAB61771.1| (M84113) ORF1 [Neisseria gonorrhoeae] Identities = 102/330 (30%), Positives = 136/330 (41%), Gaps = 39/330 (11%)

Sequence:

ATGGTCGTTGGAAAAGGCCACTGCCAGCGGATAGAGGGTGAACTGCAACATGCTCGCGGCGATTCCCAGGGC
CAGCAGCAACGCCAGCGGCATCTGTTGCAACAATGCCAGCGGCAAGGCGAACAGGCACAGCAGGATGGCGCA
GGCGCGGATCAGCCAGGCGCGGTCGCGACGGTCGGACAGCCAGCCGAGCGGCCACTGCACCAGCAGCCCGGC
GAAGATGCAGGCGCCCATGTACAGGCCGACCTGCTCGTTGGGCAACCCCAACTGGTTGGCGTACAGCGGCGC
CAGGCCATAGAAGGAGCCGACCACCAGCCCCGAGACCAATACGGTGGTCAGCGACTGCGGCACCCGGCGGAT
GAAGAAACGTGGTTCGAGCGGCGCCGGGCGCAGCGCCGCGGGGTGGATCTTGTGGGTCAGGGCCAGCGGCAC
CAGGCACAGGGCGAAACAGAAGGCCACCAGCATCAGCAATTCCGGCCCCAGTTGCGGATGCGCCACCAGGAT
CATCTGGCCGAGCACCAGGCCCAGGTAGGAAGCCGCCATGTAGCCGCCGAACACCGCGCCGCGCTGGCTGGC
ATCGGCCTGCTCGTTGAGCCAGCTCTCGATCACCATGTACTGGCACATCAGGCCCAGGCCCATCACCATGCG
CAAGGCGATCCACGCCGGCAGCCAGGGCAGCAGGCCATGGCCGAGGACCGCGGCGGTGACCACCCCGGCGCA
GGCGACGTAGGCGCGGATGTGGCCGACCCGGGCGATCAGCCGGTGACCGACCTTGCCGCCCAGCACCAGGCC
GAAGTAGTTGGCTGCCATCAGCGCGCCGACCCACAGGCCGTCGACCTTGTCCGCCGCCAGGCGCAGCGCCAG
GTAGGTGCTGAGCAGGCCGGAGCCGGTGAGCATCAGCAGGGTAGCGAAATAGAGAGCGCGAAAAGAGAAGAA
AATCCGCCGCATCGGACCTCCGGTCCCGTACAAGGGAGCCGGCGCCGCTCGCGGACTGCCCGGCTCGCACAG
CGTTGGAGTCCCGGGGAGGCCCCGGGACAGGACGCGGGATGCCGAAGCCGGCACCCGACACCACGACCCTGC
CGCCGCGAGGCGGCAGGGGGTGACACAGGGCTAGGAAAGTACCACGGTGGATCAGGCCTGGGCTGCCAGGAC
ACGACGCTCCCAGGGGCTGATCTCGTCGAAGAAGCTGGTCAGTTCCATGCTCTTGGTCGCCACGTAGCCTTC
GACGAACTCGCTGCCGAACAGTTCGCGCGCCAGCGCGCTGCCTTTCAGACGCCGCAGGGCATCGTACATGGT
GCAGGGCAGGGTCAGTTCCTCCGGTACCTCGAACTCGCCCTGGATCGCCGGGCTCGGCTCCAGTTCGTGCTC
CAGGCCGTAGAGACCGGCGGCCAGGCTGGCGGCGATGGCCAGGTAAGGGTTGGCGTCGGCGCCTGGCAGGCG
ATTCTCGACGCGCCGCGCGGAGGCTCCGCTGGCCGGGATGCGCAGGCCGGCGGCGCGGTTGTCGTGGGACCA
GCAGGCGTTGTTCGGCGATGCGTAGGGATGGCAGAGGCGCTGGAAGGAGTTCACGTGCGGCGCGAAGAAGGG
CGTGAAGTCCGCCAGGCAGGCCTGCTGGCCGCCGATGAAGTGGCGGAACGCGGCGGAAGGCTCGCCATCGGC
TTCGCTGAAGATGTTTCGCCCGCCGTCCAGTTCGACGATGCTCTGGTGGATGTGCATCGAGCTGCCCGGCGT
CTTCGCCAGCGGCTTGGCCATGCACACCACGATCAGGCCGTGCTTGAGCGCGACCTCCTTGAGCAGGTGCTT
GAACAGGAAGGTCTGGTCGGCCAGCAGGACCGGGTCGCCATGCAGGAAGTTGATCTCGAACTGGCTGGTGCC
CATCTCGTGCATGAAGGTGTCGCGCACCAGGCCCAGCGCATCCATGCAGCGGTAGACGTCCTCGAAGAACGG
CCGCAGGCCGTTGTTGGAAGACACGCTGAAGGCCGAATAGCCCAGCTCGCGCCGGCCATCCGGCCCCAGCGG
GGCCTGGAACGGCTCGTTGGGATCGGTGTTCGGGGCGAAGACGAAGAATTCCAGTTCGGTGGCCACCACCGG
TTGCCAGCCGTGGGCGGCGTAGCGCGCCACCACCTGCTTGAGCAGGCCGCGGGTGGACAGCCCGGACGGCGA
GCCATCCAGTTCCTGCGCATCGCAGATGGCGAAGGCGCGCGGAGTGTTGCTCCAGGGCAGGCGATGGACCTG
GGTCGGCTCGGCGACCAGCGCCAGGTCGCCATCGTCGCTGCCATAGAAGCGCGCCGGCGGGTAGCCGCCCAT
GATGCATTGCAGCAGCACGCCACGGGCGAGCTGCAGGCGCCGGCCGCTGAGGAAGCCCTCGCCGGTCATAAC
CTTGCCGCGCGGCACCCCGTTGAGGTCGGGGGTGACGCATTCGATTTCTTCAACTCCAGCCAGCCGTTCGGC
GAGTGA

Translation:

MVVGKGHCQRIEGELQHARGDSQGQQQRQRHLLQQCQRQGEQAQQDGAGADQPGAVATVGQPAERPLHQQPG
EDAGAHVQADLLVGQPQLVGVQRRQAIEGADHQPRDQYGGQRLRHPADEETWFERRRAQRRGVDLVGQGQRH
QAQGETEGHQHQQFRPQLRMRHQDHLAEHQAQVGSRHVAAEHRAALAGIGLLVEPALDHHVLAHQAQAHHHA
QGDPRRQPGQQAMAEDRGGDHPGAGDVGADVADPGDQPVTDLAAQHQAEVVGCHQRADPQAVDLVRRQAQRQ
VGAEQAGAGEHQQGSEIESAKREENPPHRTSGPVQGSRRRSRTARLAQRWSPGEAPGQDAGCRSRHPTPRPC
RREAAGGDTGLGKYHGGSGLGCQDTTLPGADLVEEAGQFHALGRHVAFDELAAEQFARQRAAFQTPQGIVHG
AGQGQFLRYLELALDRRARLQFVLQAVETGGQAGGDGQVRVGVGAWQAILDAPRGGSAGRDAQAGGAVVVGP
AGVVRRCVGMAEALEGVHVRREEGREVRQAGLLAADEVAERGGRLAIGFAEDVSPAVQFDDALVDVHRAARR
LRQRLGHAHHDQAVLERDLLEQVLEQEGLVGQQDRVAMQEVDLELAGAHLVHEGVAHQAQRIHAAVDVLEER
PQAVVGRHAEGRIAQLAPAIRPQRGLERLVGIGVRGEDEEFQFGGHHRLPAVGGVARHHLLEQAAGGQPGRR
AIQFLRIADGEGARSVAPGQAMDLGRLGDQRQVAIVAAIEARRRVAAHDALQQHATGELQAPAAEEALAGHN
LAARHPVEVGGDAFDFFNSSQPFGE*

AnnotationID:6327 GeneID:6326

AnnotatorUID: diggins

Modification Date/Time: 2005-04-17 17:05:21

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:12481

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29763