ViewGene
Locus Name:
GeneID:
Location:

GeneID:6325
TrivialName: PA14_20710
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_20710
PAO1 Ortholog Locus:
Sequence Length:900
Protein Length:299
Start: 1783568
Stop: 1784467
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
GTGTGCTGGTCGGGTTCAGGCCTGGCTGAGCGGGCGTTGCCGGCTGCTCGAGGCGGTGCCGCCGCGGCTGTC
GTACAGGCTAGGGGCGTCCTGGCCGCGGAGGATGTTCAGCAGGCTGCCGGTGGAAGCCTGGTTGGCGCGGAT
GATCCGCCCGTTGCGCAGGTTGGCCTGCTGGCAACGCTCCAGCAGTTCGCCCAGTTCGTCGCCGCGCGCCAG
CAGCTCGGCGCCATCCGCGCGCTCGCGGGCGTAGCGGGCAAGGCCTTCGCGGTCGAGGGAAACGCCGGCTTC
GCGGAGGATTTCCGCGCGGGCCCGGCCATTTCGCTCCAGTTGCTGCATCAGTGGCTGCTTGGCCCCGAGAAG
CTGTTGCAGGACCGGCAGCTCGCGCCGTTCCAGGGCCTGGAATTCTTCGTCGACCAACTGCAGGAGTTGGCT
GGCGTGGCCGATATCCTCGGCGAACAGATCGAGCAGGGTAGGGGAGTCAGGCATCTCGGGCTCGGGAGTTCA
TTCGGCGTCCAATGTCCTCCAGCGCGTCCTTCGAGGTCAGCGCTGGGATTCGAAGTCGAGCAGCTTGCTGGC
AACACGCTCGCTGTCGACCTGATAAGTGCCATCGGCGATCGCTTGCTTGATCCGGGCAACCTTATCGTTGTC
GACCACCGGCAGGGTCTGCAGCTGGTCCGTGACTTTCTGCATGTTCTGGGCGGTTTCGCTGATCTGCACCGA
CTCGCCGCTCTTCGGAGCGGAAGTCGCGGCCGGGCCTGCCTTGTCGGCGCCAGTGGCGTCGGGACGCCCCGC
GGCGGTGCTGCCGGTACGGCCGGTGGTGGCTGGCGTGCTGCCGGGATTCAGCCGGTTGAAGTCGATGACCAT
GGTTGTAAACCTCGAAGGTATTGGACGCTTGCCTAG
Translation:
MCWSGSGLAERALPAARGGAAAAVVQARGVLAAEDVQQAAGGSLVGADDPPVAQVGLLATLQQFAQFVAARQ
QLGAIRALAGVAGKAFAVEGNAGFAEDFRAGPAISLQLLHQWLLGPEKLLQDRQLAPFQGLEFFVDQLQELA
GVADILGEQIEQGRGVRHLGLGSSFGVQCPPARPSRSALGFEVEQLAGNTLAVDLISAIGDRLLDPGNLIVV
DHRQGLQLVRDFLHVLGGFADLHRLAALRSGSRGRACLVGASGVGTPRGGAAGTAGGGWRAAGIQPVEVDDH
GCKPRRYWTLA*
AnnotationID:6326GeneID:6325
AnnotatorUID: diggins
Modification Date/Time: 2005-04-15 13:01:52
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16116




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29761




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49327How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3170364Stop: 3169465

          
Length: 900


          
Start Codon: GTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
GTGTGCTGGTCGGGTTCAGGCCTGGCTGAGCGGGCGTTGCCGGCTGCTCGAGGCGGTGCCGCCGCGGCTGTC 
GTACAGGCTAGGGGCGTCCTGGCCGCGGAGGATGTTCAGCAGGCTGCCGGTGGAAGCCTGGTTGGCGCGGAT 
GATCCGCCCGTTGCGCAGGTTGGCCTGCTGGCAACGCTCCAGCAGTTCGCCCAGTTCGTCGCCGCGCGCCAG 
CAGCTCGGCGCCATCCGCGCGCTCGCGGGCGTAGCGGGCAAGGCCTTCGCGGTCGAGGGAAACGCCGGCTTC 
GCGGAGGATTTCCGCGCGGGCCCGGCCATTTCGCTCCAGTTGCTGCATCAGTGGCTGCTTGGCCCCGAGAAG 
CTGTTGCAGGACCGGCAGCTCGCGCCGTTCCAGGGCCTGGAATTCTTCGTCGACCAACTGCAGGAGTTGGCT 
GGCGTGGCCGATATCCTCGGCGAACAGATCGAGCAGGGTAGGGGAGTCAGGCATCTCGGGCTCGGGAGTTCA 
TTCGGCGTCCAATGTCCTCCAGCGCGTCCTTCGAGGTCAGCGCTGGGATTCGAAGTCGAGCAGCTTGCTGGC 
AACACGCTCGCTGTCGACCTGATAAGTGCCATCGGCGATCGCTTGCTTGATCCGGGCAACCTTATCGTTGTC 
GACCACCGGCAGGGTCTGCAGCTGGTCCGTGACTTTCTGCATGTTCTGGGCGGTTTCGCTGATCTGCACCGA 
CTCGCCGCTCTTCGGAGCGGAAGTCGCGGCCGGGCCTGCCTTGTCGGCGCCAGTGGCGTCGGGACGCCCCGC 
GGCGGTGCTGCCGGTACGGCCGGTGGTGGCTGGCGTGCTGCCGGGATTCAGCCGGTTGAAGTCGATGACCAT 
GGTTGTAAACCTCGAAGGTATTGGACGCTTGCCTAG