ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6320

TrivialName: PA14_20990

AnnotatorUID:

Modification Date/Time: 2006-04-06 13:01:23

LocusName: PA14_20990

PAO1 Ortholog Locus:

Sequence Length: 1404

Protein Length: 467

Start: 1807126

Stop: 1808529

Strand: +

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: dbj|BAC72123.1| (AP005038) putative GntR-family transcriptional regulator [Streptomyces avermitilis MA-4680] Identities = 60/180 (33%), Positives = 70/180 (38%), Gaps = 35/180 (19%)

Sequence:

ATGTCATTGCTCCTCGAGGGCGGATCGTTGGGGGGCGTGGATCGCCGACAGCAGGGTGCCCAGGCAATCTTC
GGCCAGGCGTTCGGCGCGTTCGCCGGGGACCGCTTCGTCGATATAGGTGAAGTTCCAGAACAGCCGGCCATG
GCTGGAGTTGATGGCGGCCACGAAGTAGCCGTTCACCGAGATGCCGGTGAGGAACTGCGCGTCGGAGAGGCG
CAAGGCGCCGATCCGCTCGGGGAACGGATAGCGACCGATGTTGGAGGAGCACAGGTTGATCGGCCCTTCGGC
TTCCATGAAGGCCATGAATGGCCGCGCGTCGGCCATGCAGCGCGGCGCAGCGCTGGCGACCAGGGTGACCAG
GTTGAAATGATGGCCCTGGCGACGGCGTTCGCCGAGGTCGTCGGTGAGCGCGCGGGCGACCTCCCAGAACGG
TCGGGCGATGTCCAGCACCACCGGTACCGTGGCGACGTAGGTGCCTACTTCGTCGGGGCGCACCGGCGGCTC
CAGTTCGTCGCGGAAGTCGATCGGCGAGCCGATGGCGATGTGGCTCGGGCGGCGCTGGTGGTCGTGGCCGGC
GGCGATGGCCAGCGCCGCGGTCAGCGCGCCGTGTACCGTGGTGCCGTGTTCGCGGGCGCGTCGTTGCAGCTG
TTCCAGCTGCGCGCCGTCCAGCTCCCGGTGCAGCAGGCGGGTACGCCGCGCTTCCAGCGGCACCGGGTTGCT
CGGCTCGATCCGGCCCGGGCGGTGGCGGCCGACCAGCGCTTCGTCCTGGGCGGTCTGCTCGGCCAGGCGCGC
CGCGCCTTCGTCGCCGGTGAAGCGGCGCGGACGCAGATCCTCCGCCGGCGGCAGGGCGCTGGCGGTCCAGGG
TTGCGCGGCGGGGTCGGCGGCCAGGGCCAGCCATTGTTCGGCGAGGGTCAGCACGGTAGTGCCGTCGGCGAT
GATGTGCGGTACCACGACCAGCAGGTCGTGGGCACCGGCGTCGGTGGTGATCGCCACGGTACGGATCAGTGG
CCCGCTGTCCGGATCGATGCGTTCCGGCAATTCGCGCTCGTTGATTTCCCGCAGCCATTGCTCCTCGCCACC
ACCGCGCACCTCGCGCAGCGGGATGGGCCGCTCGCAGGGCACCCAGCGCGGGTCGAACCCGGCATCGTGCTC
GATCCGCGCGCGCAGCAGCGGATGCCGCGCCTGCAGCGCGTCGAGGCCGCGGCGCAGGTCGTCGATGGACAA
CTGGCCATGGACCCGCACCCGGGAAATCACGTTCAGCGCGGAGAACTGGTCGCTGAGCCAGTACCAGCGTTC
CACCGCGGACAGCGGGCGTCGTATCTCGGCCATCATTCGACTCCTGGGAAGGTCAGTGCCAGTTCGTTCTGC
CGGGCGAAGGTTCGCTCCGGAGCGAAGCGGAAGTAG

Translation:

MSLLLEGGSLGGVDRRQQGAQAIFGQAFGAFAGDRFVDIGEVPEQPAMAGVDGGHEVAVHRDAGEELRVGEA
QGADPLGERIATDVGGAQVDRPFGFHEGHEWPRVGHAARRSAGDQGDQVEMMALATAFAEVVGERAGDLPER
SGDVQHHRYRGDVGAYFVGAHRRLQFVAEVDRRADGDVARAALVVVAGGDGQRRGQRAVYRGAVFAGASLQL
FQLRAVQLPVQQAGTPRFQRHRVARLDPARAVAADQRFVLGGLLGQARRAFVAGEAARTQILRRRQGAGGPG
LRGGVGGQGQPLFGEGQHGSAVGDDVRYHDQQVVGTGVGGDRHGTDQWPAVRIDAFRQFALVDFPQPLLLAT
TAHLAQRDGPLAGHPARVEPGIVLDPRAQQRMPRLQRVEAAAQVVDGQLAMDPHPGNHVQRGELVAEPVPAF
HRGQRASYLGHHSTPGKVSASSFCRAKVRSGAKRK*

AnnotationID:6321 GeneID:6320

AnnotatorUID: diggins

Modification Date/Time: 2005-04-15 08:08:41

Gene Name:

Confidence Code: 4

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: ACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits at any threshold.

Genomic Context:

Comment:

ReferenceID:12472

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29751