ViewGene

Locus Name:
GeneID:
Location:

GeneID:6319
TrivialName: PA14_21100
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_21100
PAO1 Ortholog Locus:
Sequence Length:1893
Protein Length:630
Start: 1826314
Stop: 1824422
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK25017.1| (AE005968) hypothetical protein [Caulobacter crescentus CB15]
Identities = 172/619 (27%), Positives = 226/619 (36%), Gaps = 120/619 (19%)
Sequence:
ATGGCGGCCACGGTTGATCAGTTGCACGCGCAGGTTGCCGAACAGCGGCTCGTAGTCGATCCGCACTTCCGG
CAGCGGCGCCTTGCGCTCCGCCAGGTCGCGCCGCAGGTTGCCGCGGAAGACCCGGAGGAAACCGTTCGGACC
GTGCACTTCCAGGTGGTAGTCGCCGCTGGCGTCGCCCTGGAAGCTGTCGTGCAGGCGCTTGCGCGCGCCAAC
GGTGTAGCGTTTCGGCGGGTTCTCGCTGTCGAGCAGGTCGAACACCTGGAACACCGCGCCGGCCTTGCCGGT
GTTGGCGAAGGTCAGGCTCAGCGCGTCTCCGCCGCTGCGGTAGCGCGCATGCACGCCCAACTCGTAGGGCAA
GGCGCGGGCCGGACGGATGCCCATTTCCTGCTTGGGCATGGCGGCCACCGCCGGCGGCTTCGGCTTCGGCAG
CTTGATCTGGCTGGCGACGATGGCGTCGGCCTGGCTGGTGTCGGGCAGTTCGGGGAACGGCTCGTTGTTCGG
GTTGGCGAAGTTGAACGCCGAGGTCAGGTCGCCGCAGACCGCACGACGCCAGGGACTGATATTCGGCTCCAT
GACCCCGAAGCGCTGCTCCAGGAAGCGGATCACCGAGGTGTGGTCGAACACCTGGGAGTTGACCCAGCCGCC
CTTGCTCCACGGCGAGATCACGTACATCGGCACCCGCGGGCCGAGGCCGTAGGGCTGGTTGCGATAACGGAT
ATCGCCCTTGGTGTGCCATTCGAGGGTGGCGTCGGCGGTGGTCTTGCCGCGCAGCGTGCCGTCCTTGTTCAG
GCTCGGCGCGGCCGGCGGGGCGATGTGGTCGAAGAAGCCGTCGTTCTCGTCGAACATCACCAGCAGCGCGGT
CTTGCTCCAGACCTCCGGGTTGGCGGTCAGCGCGTCGAGTACCCAGGAAGTGTACTCGGCCCCCCAGATCGG
GCTGGACGGGCCGGGGTGTTCGGAGTACTTGGCCGGGGCGACGATCCAGGACACCTGCGGCAGGCTGTTGGC
CAGCACGTCGCGCTTCAGCGCATCGAGCTTCCAGGTGCTCAGGCCGTTGACGATCAGCGGCGAGTCAGGCGC
CGCGGCGCGGTACTGGCGGAAGCCGATCAGCGGGTTGTCGGAGAAGTTGTCGGCCATGTCCTGGTAGACCCG
CCAGGTGATGCCGGCGGCCTGCAGGCGCTCGGGATAGGTGGTCCAGGTGTAGCCCTGCTCCACCGGGCCGTT
GCTGTCGTGGTCGTTGGTGGTTACCGGGCCGCCATGCTGGCCGAGCGGGTCGTTGGTGCCGGTCCAGAGGAA
CAGCCGGTTGGGGTTGGTGCCGCCCTGGAACGAGCAGTGATAGGCGTCGCAGATGGTGAAGGCGTTGGCCAT
CGCGAACTGGAAGGCGATGTCCTGCTCCTTGTAGTAGCCCAGGGAACGCTCGGTCTTGGCCGGCAACCACTT
GTCCATGCGCCCTTCGTTCCAGGCCTGCTGGGCGTCCGGCCAGGTGTGCGGGGTACCGTCGACGCGCTGGGC
GCTGGTGGTGCTGGTGTCGAAGTGGTAGGGCAGGATCTCGCCCTTGCTGCCCTTCTGGTGCCAGACCCGCTG
GCCGTCGGGCAGCGGGATCGCCATGCGGTCGCCGAAGCCGCGGACGCCCTTGAGGGTGCCGAAATAGTGGTC
GAAGGAGCGGTTCTCCTGCATCAGGATCACCACGTGCTCGACGTCCTTGAGGTTGCCATGCCGGCGGTGCGC
GGGAATCGCCAGGGCCGCCTGGATGCTCGACGGCAGCATGCTGGTGGCGACGGTGGCGCCGACCGTACCGGC
GGCCAGGCGGATGAAGCTTCTTCTGCTTTTCGAAATCATCGGGGGGACTCACCAGGTCAGGGTGTGGCACAG
GGCTGCCGAGCGCATCCATGA
Translation:
MAATVDQLHAQVAEQRLVVDPHFRQRRLALRQVAPQVAAEDPEETVRTVHFQVVVAAGVALEAVVQALARAN
GVAFRRVLAVEQVEHLEHRAGLAGVGEGQAQRVSAAAVARMHAQLVGQGAGRTDAHFLLGHGGHRRRLRLRQ
LDLAGDDGVGLAGVGQFGERLVVRVGEVERRGQVAADRTTPGTDIRLHDPEALLQEADHRGVVEHLGVDPAA
LAPRRDHVHRHPRAEAVGLVAITDIALGVPFEGGVGGGLAAQRAVLVQARRGRRGDVVEEAVVLVEHHQQRG
LAPDLRVGGQRVEYPGSVLGPPDRAGRAGVFGVLGRGDDPGHLRQAVGQHVALQRIELPGAQAVDDQRRVRR
RGAVLAEADQRVVGEVVGHVLVDPPGDAGGLQALGIGGPGVALLHRAVAVVVVGGYRAAMLAERVVGAGPEE
QPVGVGAALERAVIGVADGEGVGHRELEGDVLLLVVAQGTLGLGRQPLVHAPFVPGLLGVRPGVRGTVDALG
AGGAGVEVVGQDLALAALLVPDPLAVGQRDRHAVAEAADALEGAEIVVEGAVLLHQDHHVLDVLEVAMPAVR
GNRQGRLDARRQHAGGDGGADRTGGQADEASSAFRNHRGDSPGQGVAQGCRAHP*
AnnotationID:6320GeneID:6319
AnnotatorUID: urbach
Modification Date/Time: 2004-03-03 15:03:30
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:12470
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29750
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49321How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3127618Stop: 3129510
Length: 1893
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGCGGCCACGGTTGATCAGTTGCACGCGCAGGTTGCCGAACAGCGGCTCGTAGTCGATCCGCACTTCCGG
CAGCGGCGCCTTGCGCTCCGCCAGGTCGCGCCGCAGGTTGCCGCGGAAGACCCGGAGGAAACCGTTCGGACC
GTGCACTTCCAGGTGGTAGTCGCCGCTGGCGTCGCCCTGGAAGCTGTCGTGCAGGCGCTTGCGCGCGCCAAC
GGTGTAGCGTTTCGGCGGGTTCTCGCTGTCGAGCAGGTCGAACACCTGGAACACCGCGCCGGCCTTGCCGGT
GTTGGCGAAGGTCAGGCTCAGCGCGTCTCCGCCGCTGCGGTAGCGCGCATGCACGCCCAACTCGTAGGGCAA
GGCGCGGGCCGGACGGATGCCCATTTCCTGCTTGGGCATGGCGGCCACCGCCGGCGGCTTCGGCTTCGGCAG
CTTGATCTGGCTGGCGACGATGGCGTCGGCCTGGCTGGTGTCGGGCAGTTCGGGGAACGGCTCGTTGTTCGG
GTTGGCGAAGTTGAACGCCGAGGTCAGGTCGCCGCAGACCGCACGACGCCAGGGACTGATATTCGGCTCCAT
GACCCCGAAGCGCTGCTCCAGGAAGCGGATCACCGAGGTGTGGTCGAACACCTGGGAGTTGACCCAGCCGCC
CTTGCTCCACGGCGAGATCACGTACATCGGCACCCGCGGGCCGAGGCCGTAGGGCTGGTTGCGATAACGGAT
ATCGCCCTTGGTGTGCCATTCGAGGGTGGCGTCGGCGGTGGTCTTGCCGCGCAGCGTGCCGTCCTTGTTCAG
GCTCGGCGCGGCCGGCGGGGCGATGTGGTCGAAGAAGCCGTCGTTCTCGTCGAACATCACCAGCAGCGCGGT
CTTGCTCCAGACCTCCGGGTTGGCGGTCAGCGCGTCGAGTACCCAGGAAGTGTACTCGGCCCCCCAGATCGG
GCTGGACGGGCCGGGGTGTTCGGAGTACTTGGCCGGGGCGACGATCCAGGACACCTGCGGCAGGCTGTTGGC
CAGCACGTCGCGCTTCAGCGCATCGAGCTTCCAGGTGCTCAGGCCGTTGACGATCAGCGGCGAGTCAGGCGC
CGCGGCGCGGTACTGGCGGAAGCCGATCAGCGGGTTGTCGGAGAAGTTGTCGGCCATGTCCTGGTAGACCCG
CCAGGTGATGCCGGCGGCCTGCAGGCGCTCGGGATAGGTGGTCCAGGTGTAGCCCTGCTCCACCGGGCCGTT
GCTGTCGTGGTCGTTGGTGGTTACCGGGCCGCCATGCTGGCCGAGCGGGTCGTTGGTGCCGGTCCAGAGGAA
CAGCCGGTTGGGGTTGGTGCCGCCCTGGAACGAGCAGTGATAGGCGTCGCAGATGGTGAAGGCGTTGGCCAT
CGCGAACTGGAAGGCGATGTCCTGCTCCTTGTAGTAGCCCAGGGAACGCTCGGTCTTGGCCGGCAACCACTT
GTCCATGCGCCCTTCGTTCCAGGCCTGCTGGGCGTCCGGCCAGGTGTGCGGGGTACCGTCGACGCGCTGGGC
GCTGGTGGTGCTGGTGTCGAAGTGGTAGGGCAGGATCTCGCCCTTGCTGCCCTTCTGGTGCCAGACCCGCTG
GCCGTCGGGCAGCGGGATCGCCATGCGGTCGCCGAAGCCGCGGACGCCCTTGAGGGTGCCGAAATAGTGGTC
GAAGGAGCGGTTCTCCTGCATCAGGATCACCACGTGCTCGACGTCCTTGAGGTTGCCATGCCGGCGGTGCGC
GGGAATCGCCAGGGCCGCCTGGATGCTCGACGGCAGCATGCTGGTGGCGACGGTGGCGCCGACCGTACCGGC
GGCCAGGCGGATGAAGCTTCTTCTGCTTTTCGAAATCATCGGGGGGACTCACCAGGTCAGGGTGTGGCACAG
GGCTGCCGAGCGCATCCATGA