ViewGene

Locus Name:
GeneID:
Location:

GeneID: 6317

TrivialName: PA14_21200

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:06

LocusName: PA14_21200

PAO1 Ortholog Locus:

Sequence Length: 1704

Protein Length: 567

Start: 1836519

Stop: 1834816

Strand: -

Type:

ChromosomeID: 2

Status: INACTIVE

Frame Discrepancy: FALSE

Missense Discrepancy: FALSE

Comments:
Homology: emb|CAD14742.1| (AL646062) PROBABLE RIBONUCLEASE E (RNASE E) PROTEIN [Ralstonia solanacearum] Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Sequence:

GTGGGGGGAATCCTCCACGGCCTTTTTTCTTTCAGCCCCCGTCGCTCACTGGGCTGCCCTGGGCGCGCGGCA
ACTGGCGAAGATGTCCAGCGCCGGCTGGTACAACGAAGTCTGTACGTCCAGCAGGCCGAGAACCGAGTGGAA
CAGGTTGTCGTGGCTCAGGTCCTTGTCGTCGCGCTTGCCGTCCAGGCAACTGCGCTGGATGCCCCAGTTGCC
CAGCGCCTGCGGGGCGAACCACATGACCATCGGCACGTGGATCTGCGCCTGGGGCGCGATCGAATAGGGCGC
CGCGTGCAGGTAGACGCCATTCTCGCCCAGCGACTCGCCGTGGTCGGACACGTAGATCATCGCCGTATCGCG
CTTGTCGGCATTCCGCTTGAGCAATTCGATCACCTTCGTCAGGAAGTGGTCGGTATAGAGGATGGTGTTGTC
GTAGACGTTCACCAGCTCTTCCTTGCTGCAACTGCCGAGCTGGTTGGTCCGGCATACCGGCTGGAAGCGCTC
CATCTCCTTCGGGTAGCGCTCGTAGTACTCGGGACCGTGGCTGCCATCGGAGTGCAGGACGATGATGGCGTC
GTCCTGCAACCCGTCGATGTACTCCTGCAGGCCTACCAGCAGCGACTCGTCCAGGCAGTTCTTGCCGTCGCA
GAACGGACTCGGCTGGGTCTTCGGGATGTCCCGGTTGGGCACCCGCAGGCAGGTGCCCTTGCAGTCGCTGTT
GTTCTCCAGCCACAACACCTGCACGCCGGCACGCTGGAGAATGTCCAGCAGGCCTTCGTGGGTCTTGGCCTT
CTTGTCGCTGTAGTCCTCGCGCGGGTACTGGGAGAACATGCAGGGCACCGAGACCGCGGTGGAAGTGCCGCA
GGAACGGACCTGGGTGAAGTTGACGATGTCCTGCTTGCTCAGCTCCGGGTTGGTCTCGCGGGCGTAGCCGTT
CAGCGAGAAATGGTCGGCACGGGCGGTCTCGCCGACCACGAACACCAGCAGCGATTTCTTCTGTCGCTGCAG
CGCAGCCGGCGCCTGGCGGGCGTCCAGGCCGATCGGCTCGACCACCAGGTGCTCCTTGATCACCAGGCGCTG
CTTGGCGTACTTGCCCACCGCGTAGATGTAGTTGGTCGGGTTGATGAAGTGGGTCAGCTTGTCTTCCTCGCG
GAAGATCGGCGCGTAGGTGGAATAGAAGCTGCCTACCATTACCGCGACGATCAGCAGGCAGCCGAGCAGCGT
CAGGATCTTGTTCAGCAGGCCGCGGAAGAACGGCCGGTAGCGTACCGGCCAGAGCCAGATCAGCAGCGAAGG
CAGGACACCGAGCAACAGCAGATAGCCGAGCAGGGTTGGGTTGACCAGGTCGCCGGCCTCGGTGGCGTTGGT
CTCGAAGACGTTCTGCACCATCACCGTGTCGATGCTGATGCCGTAGCTACCCATGAAGTAGGTCGCGCCGGC
CGAGCACAGGGCGACCAGGGTCAAGGCCGGCTTGAGCAGCGGGCGGAAGGAAACCAGGGTCAGCAGGAGCGT
GAAGGCGGCCCACAGGAACGCCGCGAACGAAGCGAAGAACGCGAAGCCCTTCAAGCCTTGCAGCGGCACCAG
GCCATGCAGGGCCTTCCAGGTCGCCGCGTTGTAGAACACCACCAGAACCAGCGCGAACAGCATCACCAGCCG
GGTCGAACCGATAGCCGGCAAGAAACGCTTGATACCCCCACCCATTGA

Translation:

MGGILHGLFSFSPRRSLGCPGRAATGEDVQRRLVQRSLYVQQAENRVEQVVVAQVLVVALAVQATALDAPVA
QRLRGEPHDHRHVDLRLGRDRIGRRVQVDAILAQRLAVVGHVDHRRIALVGIPLEQFDHLRQEVVGIEDGVV
VDVHQLFLAATAELVGPAYRLEALHLLRVALVVLGTVAAIGVQDDDGVVLQPVDVLLQAYQQRLVQAVLAVA
ERTRLGLRDVPVGHPQAGALAVAVVLQPQHLHAGTLENVQQAFVGLGLLVAVVLARVLGEHAGHRDRGGSAA
GTDLGEVDDVLLAQLRVGLAGVAVQREMVGTGGLADHEHQQRFLLSLQRSRRLAGVQADRLDHQVLLDHQAL
LGVLAHRVDVVGRVDEVGQLVFLAEDRRVGGIEAAYHYRDDQQAAEQRQDLVQQAAEERPVAYRPEPDQQRR
QDTEQQQIAEQGWVDQVAGLGGVGLEDVLHHHRVDADAVATHEVGRAGRAQGDQGQGRLEQRAEGNQGQQER
EGGPQERRERSEEREALQALQRHQAMQGLPGRRVVEHHQNQREQHHQPGRTDSRQETLDTPTH*

AnnotationID:6318 GeneID:6317

AnnotatorUID: diggins

Modification Date/Time: 2006-04-23 11:11:19

Gene Name:

Confidence Code: 5

GeneProduct: hypothetical protein

Cell Localization: ()

Synonyms:

Cell Localization Confidence Code: 5

MolecularFunction:

Functional Category: (14) Hypothetical, unclassified, unknown

Alternate Gene Product Name:

Functional Category Confidence Code: 5

COGs:

Secondary Functional Category(ies):

EC Number:

Status: INACTIVE

Pathway:

Homology:

Structural Features:

CDD Search: No hits above 0.01 threshold.

Genomic Context:

Comment:

ReferenceID:16113

Author/Investigator(s): GenNotator

Title:

PubMed:

MedLine:

Source:

Reference Type: BLASTP

Data:

URL:

ReferenceID:29746