ViewGene

Locus Name:
GeneID:
Location:

GeneID:6314
TrivialName: PA14_21330
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_21330
PAO1 Ortholog Locus:
Sequence Length:1563
Protein Length:520
Start: 1849558
Stop: 1847996
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
ATGGGCCATCACCACGTCTTCGATCTCGTTGGGGTAGACATTGAAGCCAGAGACCAGGATCAGGTCCTTCTT
GCGATCGACGATACGCACGAAGCCGTCCTCGTCGATCACCGCGATGTCGCCGGTCTTCAGCCAGCCTTCGGC
ATCGAGAATCTCCTCGGTGGCCTCGGGACGCTGCCAGTACCCCTTCATCACTTGCGGACCTTTCACACAGAG
TTCGCCACGTTCGCCGACAGGCAGCTCGTTGCCCTGCTCGTCGATCACCTTGAGCGCCGTGCCCACGACCGG
AATCCCCACCGTGCCCAGGCGCGCCTGCTCGCCGTAGGGGTTGGTGGTCACCACCGGCGAGCATTCGGTGAG
GCCATAGCCTTCCACCACGGTGCAGCCGGTGACACCCTTCCAGCGCTCGGCGGTGGCGCTGACCAGTGCAGT
GCCGCCGGAGTTGGTGAGCTTCAGGTTGGAGAAATCGACGTCCTTGAACCCGGGATGCTCCATCAGCGCGAC
GAACAGGGTGTTGAGGCCGAGCAGCGCGGAGAAACGCCACTTCTTCAGTTCCTTGACGAAACCGGGGATGTC
GCGCGGGTTGGTGATCAGCACGTTATGGTTGCCGCTGACCATCATGCACATGCAGTTCGCGGTGAAGGCATA
GATGTGGTAGAGCGGCAGCGGCGCGATCATCACCTCCTGCGCCTCCTTCATCAGCGGCAGGCCATCCTTGCC
GAGCTGGGAAAGCTGGGCGTGGACCTGCAGCATGTTCGCCACCAGGTTGCCGTGGGTGAGCATCGCCCCCTT
CGAGACCCCGGTGGTGCCGCCGGTGTACTGCAACACGGCGACATCCTCCAGGCCGACCCTGACCGGCTGCAG
GGCATGGCCCTGGCCTTGCTTCAAGGCCTGCCTGAACGGCAGCGCCTGGGGCAAGCGATAATCGGGGACCAT
CTTCTTCACCGACTTCACCACGCTGTTCACCAGCCAACCCTTCAGCGCCGGCAACAGGTCGCCCATGCGCGC
CTCGATCAGGTACTCGATCCGCGTATCCGGGAGCACTTCCTCGACCAGCTTGCCGAACACGTTCAGGTAGAC
CAGCGCACGCACGCCGGCGTCCTTGAACTGGTGGCGCATTTCGCGGGCGGTGTACAGCGGATTGGTGTTGAC
CACCACCAGCCCCGCGCGCAAGGCGCCGAACACCGCGATGGGATATTGCAGGACATTGGGCATCTGCACCGC
GATGCGGTCGCCGGGCTGGAGATCGGTCTGTTTCTGCAGGTAGGCGGCGAAGGCGGCGGACAGACGATCGAG
TTCGGCGTAGCTGAGCGTCACGCCGAGATTGCTGAAGGCCGGGCGGTCGGCGAATTTCTTGCAGGAGCGCTC
GAAGACCTCGACCACGGAACGGTAGGCGGCGAAGTCGAGACTGTCGGGTACGCCGGCCGGGCGTTTGTCGTT
CCAGAATTCAGGTTGCATTTATTCTTGTCCTCTTACCTGAGCGGGTCTGGCCCGCGTGTGCGGGGTATCGGG
CAACTTAGCAGTTGCATCGGACAGCGCAAATACTCCTCCTGCCCTTATTGA
Translation:
MGHHHVFDLVGVDIEARDQDQVLLAIDDTHEAVLVDHRDVAGLQPAFGIENLLGGLGTLPVPLHHLRTFHTE
FATFADRQLVALLVDHLERRAHDRNPHRAQARLLAVGVGGHHRRAFGEAIAFHHGAAGDTLPALGGGADQCS
AAGVGELQVGEIDVLEPGMLHQRDEQGVEAEQRGETPLLQFLDETGDVARVGDQHVMVAADHHAHAVRGEGI
DVVERQRRDHHLLRLLHQRQAILAELGKLGVDLQHVRHQVAVGEHRPLRDPGGAAGVLQHGDILQADPDRLQ
GMALALLQGLPERQRLGQAIIGDHLLHRLHHAVHQPTLQRRQQVAHARLDQVLDPRIREHFLDQLAEHVQVD
QRTHAGVLELVAHFAGGVQRIGVDHHQPRAQGAEHRDGILQDIGHLHRDAVAGLEIGLFLQVGGEGGGQTIE
FGVAERHAEIAEGRAVGEFLAGALEDLDHGTVGGEVETVGYAGRAFVVPEFRLHLFLSSYLSGSGPRVRGIG
QLSSCIGQRKYSSCPY*
AnnotationID:6315GeneID:6314
AnnotatorUID: diggins
Modification Date/Time: 2005-04-15 07:07:35
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12460
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29740
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49316How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3104373Stop: 3105935
Length: 1563
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGGGCCATCACCACGTCTTCGATCTCGTTGGGGTAGACATTGAAGCCAGAGACCAGGATCAGGTCCTTCTT
GCGATCGACGATACGCACGAAGCCGTCCTCGTCGATCACCGCGATGTCGCCGGTCTTCAGCCAGCCTTCGGC
ATCGAGAATCTCCTCGGTGGCCTCGGGACGCTGCCAGTACCCCTTCATCACTTGCGGACCTTTCACACAGAG
TTCGCCACGTTCGCCGACAGGCAGCTCGTTGCCCTGCTCGTCGATCACCTTGAGCGCCGTGCCCACGACCGG
AATCCCCACCGTGCCCAGGCGCGCCTGCTCGCCGTAGGGGTTGGTGGTCACCACCGGCGAGCATTCGGTGAG
GCCATAGCCTTCCACCACGGTGCAGCCGGTGACACCCTTCCAGCGCTCGGCGGTGGCGCTGACCAGTGCAGT
GCCGCCGGAGTTGGTGAGCTTCAGGTTGGAGAAATCGACGTCCTTGAACCCGGGATGCTCCATCAGCGCGAC
GAACAGGGTGTTGAGGCCGAGCAGCGCGGAGAAACGCCACTTCTTCAGTTCCTTGACGAAACCGGGGATGTC
GCGCGGGTTGGTGATCAGCACGTTATGGTTGCCGCTGACCATCATGCACATGCAGTTCGCGGTGAAGGCATA
GATGTGGTAGAGCGGCAGCGGCGCGATCATCACCTCCTGCGCCTCCTTCATCAGCGGCAGGCCATCCTTGCC
GAGCTGGGAAAGCTGGGCGTGGACCTGCAGCATGTTCGCCACCAGGTTGCCGTGGGTGAGCATCGCCCCCTT
CGAGACCCCGGTGGTGCCGCCGGTGTACTGCAACACGGCGACATCCTCCAGGCCGACCCTGACCGGCTGCAG
GGCATGGCCCTGGCCTTGCTTCAAGGCCTGCCTGAACGGCAGCGCCTGGGGCAAGCGATAATCGGGGACCAT
CTTCTTCACCGACTTCACCACGCTGTTCACCAGCCAACCCTTCAGCGCCGGCAACAGGTCGCCCATGCGCGC
CTCGATCAGGTACTCGATCCGCGTATCCGGGAGCACTTCCTCGACCAGCTTGCCGAACACGTTCAGGTAGAC
CAGCGCACGCACGCCGGCGTCCTTGAACTGGTGGCGCATTTCGCGGGCGGTGTACAGCGGATTGGTGTTGAC
CACCACCAGCCCCGCGCGCAAGGCGCCGAACACCGCGATGGGATATTGCAGGACATTGGGCATCTGCACCGC
GATGCGGTCGCCGGGCTGGAGATCGGTCTGTTTCTGCAGGTAGGCGGCGAAGGCGGCGGACAGACGATCGAG
TTCGGCGTAGCTGAGCGTCACGCCGAGATTGCTGAAGGCCGGGCGGTCGGCGAATTTCTTGCAGGAGCGCTC
GAAGACCTCGACCACGGAACGGTAGGCGGCGAAGTCGAGACTGTCGGGTACGCCGGCCGGGCGTTTGTCGTT
CCAGAATTCAGGTTGCATTTATTCTTGTCCTCTTACCTGAGCGGGTCTGGCCCGCGTGTGCGGGGTATCGGG
CAACTTAGCAGTTGCATCGGACAGCGCAAATACTCCTCCTGCCCTTATTGA