ViewGene
Locus Name:
GeneID:
Location:

GeneID:6308
TrivialName: PA14_21500
AnnotatorUID: diggins
Modification Date/Time:2006-04-23 21:09:57
LocusName:PA14_21500
PAO1 Ortholog Locus:
Sequence Length:534
Protein Length:177
Start: 1865720
Stop: 1866253
Strand: +
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Sequence:
TTGAACCTCGACCGGCGAACGCGGCCGACCTGTCGCCCCGGATCATTCGGCGCGGATGTCGAACCCGCTGCT
GGCCTCGCTGACGATGCGGAAGCGCGCGTTGCCGTCCGCGGCGATCCGGGTTCTCAGCTCGCGGTTCAGCAG
GCCCTTGCCGCAGAGAGTGTCGTCCTGGGTATCGATGCCGATACCGACCACATGCTCGCCCGCCGGCACCTG
GAAGCTGGCTTCCTCGCCGACGCCGATGCGCGCGGCGACCTGGCGGTCGATAAGGAACGCCACGTAGCAGCC
GCCGCCCAGGTAGCCATAGTCGCGGTGGACTTCCAGCCGGCCGCCACCGCTCACCGGTTGCTGGTAGCCGAG
CAGGCGTTCGGCGGGGATCGCCCGGGTCTTCTCGGCGGGAACCGAGGAGCAGCCAGCCAGGAGGAAAAGGAT
CGCTACGGCGTACATCGGGCGCATGAAGGCTCTCCGTCGAAAGGTTCCCTCAGGCTAGCCCAGTTTCGCTGG
AGCGCGGAGCGACGGGGCGGAGTGGGCTAG
Translation:
MNLDRRTRPTCRPGSFGADVEPAAGLADDAEARVAVRGDPGSQLAVQQALAAESVVLGIDADTDHMLARRHL
EAGFLADADARGDLAVDKERHVAAAAQVAIVAVDFQPAATAHRLLVAEQAFGGDRPGLLGGNRGAASQEEKD
RYGVHRAHEGSPSKGSLRLAQFRWSAERRGGVG*
AnnotationID:6309GeneID:6308
AnnotatorUID: diggins
Modification Date/Time: 2006-04-23 21:09:37
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:INACTIVE
Pathway:






 
Homology:






 
Structural Features:
CDD Search: No hits above 0.01 threshold.






   
Genomic Context:






   
Comment:


















    ReferenceID:16102




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:29728




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









      

          
GC ORFID: 49310How Found: Glimmer

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: Glimmer Score: 

          
Start: 3088211Stop: 3087678

          
Length: 534


          
Start Codon: TTGTruncated Start:

          
Stop Codon: TAGTruncated Stop: 

          
Homolog: Homolog Bit Score 

          
Other Homologs:  

          
GC ORF Sequence

           
TTGAACCTCGACCGGCGAACGCGGCCGACCTGTCGCCCCGGATCATTCGGCGCGGATGTCGAACCCGCTGCT 
GGCCTCGCTGACGATGCGGAAGCGCGCGTTGCCGTCCGCGGCGATCCGGGTTCTCAGCTCGCGGTTCAGCAG 
GCCCTTGCCGCAGAGAGTGTCGTCCTGGGTATCGATGCCGATACCGACCACATGCTCGCCCGCCGGCACCTG 
GAAGCTGGCTTCCTCGCCGACGCCGATGCGCGCGGCGACCTGGCGGTCGATAAGGAACGCCACGTAGCAGCC 
GCCGCCCAGGTAGCCATAGTCGCGGTGGACTTCCAGCCGGCCGCCACCGCTCACCGGTTGCTGGTAGCCGAG 
CAGGCGTTCGGCGGGGATCGCCCGGGTCTTCTCGGCGGGAACCGAGGAGCAGCCAGCCAGGAGGAAAAGGAT 
CGCTACGGCGTACATCGGGCGCATGAAGGCTCTCCGTCGAAAGGTTCCCTCAGGCTAGCCCAGTTTCGCTGG 
AGCGCGGAGCGACGGGGCGGAGTGGGCTAG