ViewGene

Locus Name:
GeneID:
Location:

GeneID:6306
TrivialName: PA14_21740
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_21740
PAO1 Ortholog Locus:
Sequence Length:2034
Protein Length:677
Start: 1891423
Stop: 1889390
Strand: -
Type:
ChromosomeID:2
Status: INACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAK22724.1| (AE005749) hypothetical protein [Caulobacter crescentus CB15]
Identities = 184/726 (25%), Positives = 267/726 (36%), Gaps = 133/726 (18%)
Sequence:
ATGTTGGGTCATCGTCCTTGTTACCTTGCGTGGCTGCCGAAAGGAAGCCCGTCATCGATTGGACTGCATGGA
CCGCGGATCAGGCCACAGCGTTCCGATGGAAATTCCGCGCCCATCATAGAACAGGCGTCCGCGTTGCCGCAG
GACGCCTGTCGTCGGACGATGCGCCAAGTCGCATCCGAATATTCAGAAACCGACGCTGGCCTGCATGAACAG
CGTTCGCGGCTGACCCACGTAGATTCCCGAATTGTTGTCGCTGGAGCGGGTGAAATACTGCTTGTCGAACAG
GTTCTTCACCCCGAGGCCGAGCTTCAGGTTCGACGCCTGCGGGCCGAAGTCGTAGCCGACGCGGGCATTCCA
GGTCACGTAGCCGGGAATGTCGCCGTACTGGCCGTCGGCGCTGGGCTCGGTGATGTAGTTGTGGGTGAAGTT
GCCCTGGCTGTCGGTGCTCAGCCCTGGCGCGCGCTGCATGGACTGGGCGAAGGCGTCGAGGTTGTAGGTCCA
GCGGTCGACCTCGTAGCGCACCCCGGCGGTGGCCACCTGGCGCGAGTAGAGCGGCAGGTCGCGCCCCTTGAA
GGAGGGAATGTCGCCTTCGTAGGTGGCGCGGGTATAGGTGAGGCTGCCGTAGACCGACAGGCCGTCCAGGCG
CGGATCGAGAGCGGCGAAGTCATAGTGGCCGGAAGTCTCGATGCCCTGGTGCTTGGTGGCGCCGAGGTTGGT
CCAGCCGACGTCGTTGCTGACGTACTGCAGCTCGTCGTCGAAGTCGATGTAGAACAGCGTGATCTCGCCGCC
CCAGCTGCCGTTGTCGTAGCGCGTGCCCAGTTCGTAGGTCTTGGCCTTCTCCGGCTCCAGGCCGGCGGCGGT
ATCGTTGCCGCTGCCGCCCTGGCCGAGCTGGAAATACTGCAGGCTGCCGAACGATTCGGAGTAGTTGGCGAA
CAGCTTCCACTCGTCGCTCAAGTGATACATCAGGCTCAGCGCCGGCAGCGGTTCGTTGTAGTCCTTGCTGCG
CTTCTTCTCCTGCACCGGCTTGCCGTTCAGGCCGAGCACCGGGCGGTCGCGCCAGTCGCTGTCGATCTTCTC
GAAGCGGATGCCGGGGGTGATGGTCCAGTTGCCGACATCGATCTTGTCGTCGATGTAGAAGGCGCTGGCCTC
GGTACCGCCGGTACGGTCCTGGTAGGTATGGCCGTCCGAGCCGGGACGCACGGTCGGCACATTGTCGACCAG
TGCCAGTTGGCTGGCACGCTCGTTCATCGCTTCCTTCAGGTAGCGGTAGCCGATGCCGATCTCCTGGGTGGT
CGGGCCGGCGAAGAAGATCCGCGAGACCCGCGGCTCCACCGCGAACACATGGTAGTCGCGCGGGTACGAGGT
GATGGTCCTGAGGTTGCGCGCGGCGATGCTGCTGCCGCGGAAACTGTCGCTGTAGTAGGTGAGCACCTCGAA
CTGGGTGAGGTCGTCGACCTGGCGGGTGTACTTCAGCGAGAAGTCCTTGCGCCGACCACGGAAGTTGTCCCA
GTCGCGCACCGACTGGAAGGGATCGTCGTCGTACTGCGCCTGGGTCAGGCCGCCCGGCATATCGGCGTAGGC
GTCGTAGTAGTGGAAGTTGGCCGCCAACTGGTCGCTGTCGGTGAGCTGCCAATGGGTCTTGAGCAGCACGTC
ATCAATATCGTTGTCGTTGTTGCCGTCGCGGTAGTCGGCGCCCTTCACCCCGGAATACAGCAGCGCCACGCC
CAGGCCGTTGTCGGCGGTCCCGCCGAGGAACGCCTGGTTGAGCTTCTTCCAGCCGCCGTGGCCGGCATGCTC
GATGGTGGTGCCGATTTCGCCGGAGAACTTCTCCGGAATCGCCCGGGTCACGAAGTTGATCACCCCGCCGAC
GTTCTGCGGGCCGTAGCGCACCGAGCCGGCGCCGCGCACGACGTCGATGCTCTCCAGGTTGCCGATGGACAA
CGGCATCATCGACAGCTGCGGCTGGCCGTAGGGCGCCACCGCCGCCGGCACGCCGTCGATCATCACCGTCGA
GCGCGGCGACAGGCGTGA
Translation:
MLGHRPCYLAWLPKGSPSSIGLHGPRIRPQRSDGNSAPIIEQASALPQDACRRTMRQVASEYSETDAGLHEQ
RSRLTHVDSRIVVAGAGEILLVEQVLHPEAELQVRRLRAEVVADAGIPGHVAGNVAVLAVGAGLGDVVVGEV
ALAVGAQPWRALHGLGEGVEVVGPAVDLVAHPGGGHLARVERQVAPLEGGNVAFVGGAGIGEAAVDRQAVQA
RIESGEVIVAGSLDALVLGGAEVGPADVVADVLQLVVEVDVEQRDLAAPAAVVVARAQFVGLGLLRLQAGGG
IVAAAALAELEILQAAERFGVVGEQLPLVAQVIHQAQRRQRFVVVLAALLLLHRLAVQAEHRAVAPVAVDLL
EADAGGDGPVADIDLVVDVEGAGLGTAGTVLVGMAVRAGTHGRHIVDQCQLAGTLVHRFLQVAVADADLLGG
RAGEEDPRDPRLHREHMVVARVRGDGPEVARGDAAAAETVAVVGEHLELGEVVDLAGVLQREVLAPTTEVVP
VAHRLEGIVVVLRLGQAARHIGVGVVVVEVGRQLVAVGELPMGLEQHVINIVVVVAVAVVGALHPGIQQRHA
QAVVGGPAEERLVELLPAAVAGMLDGGADFAGELLRNRPGHEVDHPADVLRAVAHRAGAAHDVDALQVADGQ
RHHRQLRLAVGRHRRRHAVDHHRRARRQA*
AnnotationID:6307GeneID:6306
AnnotatorUID: diggins
Modification Date/Time: 2005-04-14 18:06:03
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits above 0.01 threshold.
Genomic Context:
Comment:
ReferenceID:12448
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:29724
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
GC ORFID: 49308How Found: Glimmer
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: Glimmer Score:
Start: 3062508Stop: 3064541
Length: 2034
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: Homolog Bit Score
Other Homologs:
GC ORF Sequence
ATGTTGGGTCATCGTCCTTGTTACCTTGCGTGGCTGCCGAAAGGAAGCCCGTCATCGATTGGACTGCATGGA
CCGCGGATCAGGCCACAGCGTTCCGATGGAAATTCCGCGCCCATCATAGAACAGGCGTCCGCGTTGCCGCAG
GACGCCTGTCGTCGGACGATGCGCCAAGTCGCATCCGAATATTCAGAAACCGACGCTGGCCTGCATGAACAG
CGTTCGCGGCTGACCCACGTAGATTCCCGAATTGTTGTCGCTGGAGCGGGTGAAATACTGCTTGTCGAACAG
GTTCTTCACCCCGAGGCCGAGCTTCAGGTTCGACGCCTGCGGGCCGAAGTCGTAGCCGACGCGGGCATTCCA
GGTCACGTAGCCGGGAATGTCGCCGTACTGGCCGTCGGCGCTGGGCTCGGTGATGTAGTTGTGGGTGAAGTT
GCCCTGGCTGTCGGTGCTCAGCCCTGGCGCGCGCTGCATGGACTGGGCGAAGGCGTCGAGGTTGTAGGTCCA
GCGGTCGACCTCGTAGCGCACCCCGGCGGTGGCCACCTGGCGCGAGTAGAGCGGCAGGTCGCGCCCCTTGAA
GGAGGGAATGTCGCCTTCGTAGGTGGCGCGGGTATAGGTGAGGCTGCCGTAGACCGACAGGCCGTCCAGGCG
CGGATCGAGAGCGGCGAAGTCATAGTGGCCGGAAGTCTCGATGCCCTGGTGCTTGGTGGCGCCGAGGTTGGT
CCAGCCGACGTCGTTGCTGACGTACTGCAGCTCGTCGTCGAAGTCGATGTAGAACAGCGTGATCTCGCCGCC
CCAGCTGCCGTTGTCGTAGCGCGTGCCCAGTTCGTAGGTCTTGGCCTTCTCCGGCTCCAGGCCGGCGGCGGT
ATCGTTGCCGCTGCCGCCCTGGCCGAGCTGGAAATACTGCAGGCTGCCGAACGATTCGGAGTAGTTGGCGAA
CAGCTTCCACTCGTCGCTCAAGTGATACATCAGGCTCAGCGCCGGCAGCGGTTCGTTGTAGTCCTTGCTGCG
CTTCTTCTCCTGCACCGGCTTGCCGTTCAGGCCGAGCACCGGGCGGTCGCGCCAGTCGCTGTCGATCTTCTC
GAAGCGGATGCCGGGGGTGATGGTCCAGTTGCCGACATCGATCTTGTCGTCGATGTAGAAGGCGCTGGCCTC
GGTACCGCCGGTACGGTCCTGGTAGGTATGGCCGTCCGAGCCGGGACGCACGGTCGGCACATTGTCGACCAG
TGCCAGTTGGCTGGCACGCTCGTTCATCGCTTCCTTCAGGTAGCGGTAGCCGATGCCGATCTCCTGGGTGGT
CGGGCCGGCGAAGAAGATCCGCGAGACCCGCGGCTCCACCGCGAACACATGGTAGTCGCGCGGGTACGAGGT
GATGGTCCTGAGGTTGCGCGCGGCGATGCTGCTGCCGCGGAAACTGTCGCTGTAGTAGGTGAGCACCTCGAA
CTGGGTGAGGTCGTCGACCTGGCGGGTGTACTTCAGCGAGAAGTCCTTGCGCCGACCACGGAAGTTGTCCCA
GTCGCGCACCGACTGGAAGGGATCGTCGTCGTACTGCGCCTGGGTCAGGCCGCCCGGCATATCGGCGTAGGC
GTCGTAGTAGTGGAAGTTGGCCGCCAACTGGTCGCTGTCGGTGAGCTGCCAATGGGTCTTGAGCAGCACGTC
ATCAATATCGTTGTCGTTGTTGCCGTCGCGGTAGTCGGCGCCCTTCACCCCGGAATACAGCAGCGCCACGCC
CAGGCCGTTGTCGGCGGTCCCGCCGAGGAACGCCTGGTTGAGCTTCTTCCAGCCGCCGTGGCCGGCATGCTC
GATGGTGGTGCCGATTTCGCCGGAGAACTTCTCCGGAATCGCCCGGGTCACGAAGTTGATCACCCCGCCGAC
GTTCTGCGGGCCGTAGCGCACCGAGCCGGCGCCGCGCACGACGTCGATGCTCTCCAGGTTGCCGATGGACAA
CGGCATCATCGACAGCTGCGGCTGGCCGTAGGGCGCCACCGCCGCCGGCACGCCGTCGATCATCACCGTCGA
GCGCGGCGACAGGCGTGA